FFCP PHASE2:Hg19::chr12:113416311..113416336,+: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:4939 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:8087 |TSSclass...") |
No edit summary |
||
Line 2: | Line 2: | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=4939 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=8087 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=F8W1C5 | ||
|association_with_transcript=-8bp_to_ENST00000552756_5end | |association_with_transcript=-8bp_to_ENST00000552756_5end | ||
|cluster_id=chr12:113416311..113416336,+ | |cluster_id=chr12:113416311..113416336,+ |
Latest revision as of 11:51, 16 September 2015
Short description: | p2@OAS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_OAS2_5end |
Coexpression cluster: | C413_CD14_Smooth_gall_mesothelioma_meningioma_Fibroblast_Neutrophils |
Association with transcript: | -8bp_to_ENST00000552756_5end |
EntrezGene: | OAS2 |
HGNC: | 8087 |
UniProt: | F8W1C5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p2@OAS2 |
---|
0
20
40
60
80
100
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nongranular leukocyte | 5.92e-49 | 115 |
leukocyte | 2.06e-44 | 136 |
hematopoietic lineage restricted progenitor cell | 9.40e-42 | 120 |
hematopoietic stem cell | 5.51e-31 | 168 |
hematopoietic oligopotent progenitor cell | 6.27e-29 | 161 |
hematopoietic multipotent progenitor cell | 6.27e-29 | 161 |
hematopoietic cell | 2.12e-26 | 177 |
lymphocyte | 2.22e-23 | 53 |
common lymphoid progenitor | 2.22e-23 | 53 |
lymphoid lineage restricted progenitor cell | 4.71e-23 | 52 |
Showing 1 to 10 of 35 entries
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 7.09e-27 | 108 |
hematopoietic system | 1.19e-26 | 98 |
blood island | 1.19e-26 | 98 |
immune system | 4.16e-23 | 93 |
bone marrow | 1.50e-19 | 76 |
bone element | 2.23e-16 | 82 |
skeletal element | 9.69e-15 | 90 |
skeletal system | 1.66e-13 | 100 |
lateral plate mesoderm | 8.62e-10 | 203 |
Showing 1 to 9 of 9 entries