FFCP PHASE2:Hg19::chr13:107028964..107028978,+: Difference between revisions
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=728192 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | ||
|HGNC= | |HGNC=42809 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt= |
Latest revision as of 10:21, 16 September 2015
Short description: | p2@LINC00460 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LINC00460_5end |
Coexpression cluster: | C164_signet_corpus_optic_mucinous_substantia_salivary_choriocarcinoma |
Association with transcript: | 53bp_to_ENST00000435024, ENST00000439790, NR_034119, uc001vqg.2, uc001vqh.2_5end |
EntrezGene: | LINC00460 |
HGNC: | 42809 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p2@LINC00460 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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bladder cell | 8.95e-11 | 1 |
lower urinary tract cell | 8.95e-11 | 1 |
osteoblast | 5.34e-08 | 11 |
osteoprogenitor cell | 5.34e-08 | 11 |
mesenchyme condensation cell | 5.34e-08 | 11 |
epithelial cell of uterus | 5.75e-07 | 6 |
stromal cell of endometrium | 5.75e-07 | 6 |
Showing 1 to 7 of 7 entries
Ontology term | p-value | n |
---|---|---|
hepatopancreatic ampulla | 7.40e-11 | 1 |
extrahepatic bile duct | 7.40e-11 | 1 |
common bile duct | 7.40e-11 | 1 |
duodenal papilla | 7.40e-11 | 1 |
urinary bladder urothelium | 8.95e-11 | 1 |
wall of urinary bladder | 8.95e-11 | 1 |
mucosa of urinary bladder | 8.95e-11 | 1 |
Showing 1 to 7 of 7 entries
Ontology term | p-value | n |
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connective tissue cancer | 5.90e-14 | 6 |
musculoskeletal system cancer | 5.90e-14 | 6 |
pleomorphic carcinoma | 8.14e-11 | 1 |
osteosarcoma | 1.43e-10 | 1 |
organ system benign neoplasm | 3.96e-10 | 1 |
skin benign neoplasm | 3.96e-10 | 1 |
integumentary system benign neoplasm | 3.96e-10 | 1 |
dermis tumor | 3.96e-10 | 1 |
cutaneous fibrous histiocytoma | 3.96e-10 | 1 |
cystadenocarcinoma | 4.75e-10 | 1 |
Showing 1 to 10 of 16 entries