FFCP PHASE2:Hg19::chr7:128398981..128398995,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:813 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:1458 |TSSclassi...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=813 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=1458 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt= |
Latest revision as of 03:55, 16 September 2015
Short description: | p6@CALU |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_CALU_5end |
Coexpression cluster: | NA |
Association with transcript: | -20bp_to_ENST00000493278_5end |
EntrezGene: | CALU |
HGNC: | 1458 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p6@CALU |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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fibroblast | 2.71e-15 | 76 |
multi fate stem cell | 8.40e-11 | 427 |
somatic stem cell | 2.96e-10 | 433 |
stem cell | 1.48e-09 | 441 |
vascular associated smooth muscle cell | 4.82e-09 | 32 |
smooth muscle cell | 5.35e-09 | 43 |
smooth muscle myoblast | 5.35e-09 | 43 |
muscle precursor cell | 3.38e-08 | 58 |
myoblast | 3.38e-08 | 58 |
multi-potent skeletal muscle stem cell | 3.38e-08 | 58 |
Showing 1 to 10 of 15 entries
Ontology term | p-value | n |
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systemic artery | 1.39e-10 | 33 |
systemic arterial system | 1.39e-10 | 33 |
artery | 2.89e-10 | 42 |
arterial blood vessel | 2.89e-10 | 42 |
arterial system | 2.89e-10 | 42 |
splanchnic layer of lateral plate mesoderm | 3.02e-07 | 83 |
skeletal muscle tissue | 3.16e-07 | 62 |
striated muscle tissue | 3.16e-07 | 62 |
myotome | 3.16e-07 | 62 |
dense mesenchyme tissue | 4.47e-07 | 73 |
Showing 1 to 10 of 18 entries