FFCP PHASE2:Hg19::chr1:111682058..111682130,+: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:10390 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:24289 |TSScla...") |
No edit summary |
||
| Line 2: | Line 2: | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=10390 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=24289 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q9Y6K0 | ||
|association_with_transcript=-118bp_to_ENST00000498239,ENST00000545121,NM_001007794,uc001eag.2,uc001eah.1_5end | |association_with_transcript=-118bp_to_ENST00000498239,ENST00000545121,NM_001007794,uc001eag.2,uc001eah.1_5end | ||
|cluster_id=chr1:111682058..111682130,+ | |cluster_id=chr1:111682058..111682130,+ | ||
Latest revision as of 02:29, 16 September 2015
| Short description: | p2@CEPT1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_2_at_CEPT1_5end |
| Coexpression cluster: | NA |
| Association with transcript: | -118bp_to_ENST00000498239, ENST00000545121, NM_001007794, uc001eag.2, uc001eah.1_5end |
| EntrezGene: | CEPT1 |
| HGNC: | 24289 |
| UniProt: | Q9Y6K0 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p2@CEPT1 |
|---|
0
5
10
15
20
25
30
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| nongranular leukocyte | 2.17e-18 | 115 |
| hematopoietic lineage restricted progenitor cell | 1.05e-17 | 120 |
| hematopoietic stem cell | 9.46e-17 | 168 |
| hematopoietic oligopotent progenitor cell | 1.09e-16 | 161 |
| hematopoietic multipotent progenitor cell | 1.09e-16 | 161 |
| leukocyte | 2.53e-16 | 136 |
| hematopoietic cell | 6.94e-16 | 177 |
| macrophage dendritic cell progenitor | 1.13e-14 | 61 |
| monopoietic cell | 3.24e-14 | 59 |
| monocyte | 3.24e-14 | 59 |
Showing 1 to 10 of 26 entries
| Ontology term | p-value | n |
|---|---|---|
| hematopoietic system | 4.88e-16 | 98 |
| blood island | 4.88e-16 | 98 |
| hemolymphoid system | 3.29e-15 | 108 |
| immune system | 4.85e-12 | 93 |
| bone marrow | 3.41e-11 | 76 |
| bone element | 5.62e-10 | 82 |
| skeletal element | 5.02e-09 | 90 |
| connective tissue | 1.18e-07 | 371 |
| skeletal system | 3.40e-07 | 100 |
Showing 1 to 9 of 9 entries
