FFCP PHASE1:Hg19::chr10:104001289..104001310,-: Difference between revisions
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=5309 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=9006 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=O75364 | ||
|association_with_transcript=-58bp_to_ENST00000370002,NM_005029,uc001kuu.1_5end | |association_with_transcript=-58bp_to_ENST00000370002,NM_005029,uc001kuu.1_5end | ||
|cluster_id=chr10:104001289..104001310,- | |cluster_id=chr10:104001289..104001310,- | ||
Latest revision as of 00:35, 16 September 2015
| Short description: | p2@PITX3 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_2_at_PITX3_5end |
| Coexpression cluster: | NA |
| Association with transcript: | -58bp_to_ENST00000370002, NM_005029, uc001kuu.1_5end |
| EntrezGene: | PITX3 |
| HGNC: | 9006 |
| UniProt: | O75364 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p2@PITX3 |
|---|
0.0
2.5
5.0
7.5
10.0
12.5
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| ciliated cell | 1.50e-30 | 3 |
| ciliated epithelial cell | 1.50e-30 | 3 |
| multi-ciliated epithelial cell | 1.50e-30 | 3 |
| non-pigmented ciliary epithelial cell | 1.50e-30 | 3 |
| columnar/cuboidal epithelial cell | 6.90e-13 | 27 |
| crystallin accumulating cell | 6.33e-11 | 4 |
| vertebrate lens cell | 6.33e-11 | 4 |
| lens epithelial cell | 6.33e-11 | 4 |
| neurecto-epithelial cell | 3.36e-08 | 20 |
Showing 1 to 9 of 9 entries
| Ontology term | p-value | n |
|---|---|---|
| ciliary epithelium | 1.50e-30 | 3 |
| ciliary body | 1.50e-30 | 3 |
| sense organ | 1.99e-25 | 24 |
| sensory system | 1.99e-25 | 24 |
| entire sense organ system | 1.99e-25 | 24 |
| atypical epithelium | 4.29e-23 | 4 |
| pigment epithelium of eye | 1.40e-22 | 11 |
| throat | 5.20e-21 | 2 |
| muscle structure | 6.37e-21 | 2 |
| muscle organ | 6.37e-21 | 2 |
Showing 1 to 10 of 86 entries
