FFCP PHASE1:Mm9::chr3:36050035..36050046,+: Difference between revisions
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{{FFCP|EntrezGene=241944|HGNC=|UniProt=F7A4H5|association_with_transcript=33bp_to_NM_001101478,uc008ozg.2_5end|description=CAGE_peak_3_at_D3Ertd254e_5end|id=chr3:36050035..36050046,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!4.73e-08!71;UBERON:0003075!4.73e-08!71;UBERON:0007284!4.73e-08!71|ontology_enrichment_uberon_v019_2=UBERON:0002346,5.66e-11,64;UBERON:0003075,5.66e-11,64;UBERON:0007284,5.66e-11,64;UBERON:0010371,1.54e-09,73;UBERON:0001049,2.02e-08,52;UBERON:0005068,2.02e-08,52;UBERON:0006241,2.02e-08,52;UBERON:0007135,2.02e-08,52;UBERON:0002616,5.40e-08,46;UBERON:0010314,5.60e-08,92;UBERON:0000073,9.39e-08,54;UBERON:0003056,1.02e-07,49;UBERON:0000955,1.03e-07,47;UBERON:0006238,1.03e-07,47;UBERON:0002021,3.50e-07,10;UBERON:0000411,3.50e-07,10;UBERON:0001950,3.50e-07,10;UBERON:0004121,5.64e-07,95;UBERON:0000924,5.64e-07,95;UBERON:0006601,5.64e-07,95|phase1_expression=0.480446541314382,0,0,0.30246421130683,0,0.16787927191189,0.233612640595526,0.258246646883153,0,0,0,0,0.342401459862411,0.611942816932982,0,0,0,0.157731082679119,0.411343300817216,0,0.935476191661768,0.0992909512008853,0,0.639969691173627,0,0,0.430761996159075,0.646413698057667,0.380046838912748,0.504060259519861,0,0.635030673459631,0,0,0.288851619751275,0.166234645358492,0.204169356262369,0,0,0,0,0,0,1.1330713617802,1.31790010585369,0.550640256485045,0,0.218025156380447,0.219686182734472,0.194429899074283,0,0,0.167782606057736,0,0.336093799142464,0.771778308107841,0.573066879877513,0.515672092277442,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0.299600110518405,0.384218305321555,0.829516898467821,0.405017814995072,0.630974884054146,0.856952953211411,0.441737081903227,0.61245399607477,0.575072826109418,0,0,0.766124028511126,1.22885226604995,0.527545150920775,0.457438218012048,0.52091337055676,0.279182999001381,0,0.763991238884051,0.294628585473668,1.28134512719193,0.931997229126503,0.454357159999104,0.755715601067855,0.579728977403356,0,0,0,0,0.448026887097336,0.280888840263504,0.852151612890289,0.779358013808606,0.35333957451034,0.563373679106722,0,0,0,0.216491041011214,0.760079596425296,0.505524445014783,0.79928715803342,0.258937883647172,0.593768556259299,0.346970653532272,0.913396434936424,1.15307748628029,0.904335843315735,1.41106448562846,0.502666365318702,0.494389935468748,1.15679485535929,0,1.13236794963186,0.220841518460394,0.484875253135222,1.86391761218122,1.17112318804619,1.67557365450764,0,0.11981512450592,0,0.127070227073065,1.3481157546434,0.457500602818626,1.13088916901578,3.30266208365325,1.02286182932132,1.87009240103604,2.10913641988085,0.305518091550949,0.373220911830279,0.758168275301024,0.420883711772948,1.17108398666433,1.37941262660084,0.900310649026746,1.35634336052144,1.15662048557257,0.640568601424249,0.843315521037559,1.03481348295606,0.431135985865684,1.13463648100692,0.879755620819744,1.31517439456545,0.556094498451196,0.696504333044333,0.61734640922383,0.796137067273973,0,0.257347907114715,0,0.414251545071004,0.938104239924385,1.08037236876609,0.946978942340841,0.983821158737019,0.617068451549513,0.465067889500816,0.268273401399619,0.700592054203017,0.822799249567402,0.985004784474571,0.56748166682099,1.02339991197733,0.439100230582101,0.671032093801859,2.10289948564127,1.74937841044784,0.330418782983798,0.528901133327089,0.213288250535234,0.696710015581316,0.902072229254653,0.605050573870028,0.444756087689741,0.380451252225118,0,0.329397909448022,0.502670417600539,0.198956472041151,0.19496408711912,0,0.864552199498777,1.1948476395262,0,1.02823661348756,1.1270773567308,0.610953983535943,0.969762435838129,0.701358198903186,0.69560190836683,0.442830443938806,0.941992367048249,1.23397163921801,0,0,0.393117990226406,0,0.608580364165509,0.241177159752417,0.25462585178142,0.575392274901621,0.162135226775035,0.549122826376163,1.43768206527355,1.11642284300551,0,0.757736633841335,0.358794827043824,0.482443521363367,0.923765950833023,0.947457058852424,0.325929952884052,0.509235257325564,0.704070744865506,1.00503754465089,0.476087281772027,0.975668239288994,1.7339865851681,0.664394068946325,1.2756381492599,1.96635977658886,0.863424909329478,0.433947175744535,1.50791283939272,0,0.491764273019036,0.827810238914197,1.60550589987792,2.22702204525186,0.983609672260053,0.757412781613119,1.57754109708128,0,0.646270193198397,0.955875191810208,0.668396022247182,0.566153061577665,1.61924280669958,0.876767573733936,0.790575555893047,0.642642632843614,0.851640511249612,0.178065603667255,0.81443479676788,0.659880491890142,0,0.728341908464944,0,0.377210159511796,0,0,0.258428293168221,0.363533729477506,0,0.316036757935816,0,1.03135543248187,2.04263763452273,0.36012218806262,0.388076051348264,0.214337035031592,0.709360934569094,0.713475270408282,0.987294123612726,0.304464949114599,0.469343416127421,0,0.882113592219848,1.15420377059036,0.322928853391811,0.542816324353403,0.477489376012546,0.98484539847036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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:241944 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:F7A4H5 | |||
|association_with_transcript=33bp_to_NM_001101478,uc008ozg.2_5end | |||
|cluster_id=chr3:36050035..36050046,+ | |||
|description=CAGE_peak_3_at_D3Ertd254e_5end | |||
|id=chr3:36050035..36050046,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!4.73e-08!71;UBERON:0003075!4.73e-08!71;UBERON:0007284!4.73e-08!71 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,5.66e-11,64;UBERON:0003075,5.66e-11,64;UBERON:0007284,5.66e-11,64;UBERON:0010371,1.54e-09,73;UBERON:0001049,2.02e-08,52;UBERON:0005068,2.02e-08,52;UBERON:0006241,2.02e-08,52;UBERON:0007135,2.02e-08,52;UBERON:0002616,5.40e-08,46;UBERON:0010314,5.60e-08,92;UBERON:0000073,9.39e-08,54;UBERON:0003056,1.02e-07,49;UBERON:0000955,1.03e-07,47;UBERON:0006238,1.03e-07,47;UBERON:0002021,3.50e-07,10;UBERON:0000411,3.50e-07,10;UBERON:0001950,3.50e-07,10;UBERON:0004121,5.64e-07,95;UBERON:0000924,5.64e-07,95;UBERON:0006601,5.64e-07,95 | |||
|phase1_expression=0.480446541314382,0,0,0.30246421130683,0,0.16787927191189,0.233612640595526,0.258246646883153,0,0,0,0,0.342401459862411,0.611942816932982,0,0,0,0.157731082679119,0.411343300817216,0,0.935476191661768,0.0992909512008853,0,0.639969691173627,0,0,0.430761996159075,0.646413698057667,0.380046838912748,0.504060259519861,0,0.635030673459631,0,0,0.288851619751275,0.166234645358492,0.204169356262369,0,0,0,0,0,0,1.1330713617802,1.31790010585369,0.550640256485045,0,0.218025156380447,0.219686182734472,0.194429899074283,0,0,0.167782606057736,0,0.336093799142464,0.771778308107841,0.573066879877513,0.515672092277442,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0.299600110518405,0.384218305321555,0.829516898467821,0.405017814995072,0.630974884054146,0.856952953211411,0.441737081903227,0.61245399607477,0.575072826109418,0,0,0.766124028511126,1.22885226604995,0.527545150920775,0.457438218012048,0.52091337055676,0.279182999001381,0,0.763991238884051,0.294628585473668,1.28134512719193,0.931997229126503,0.454357159999104,0.755715601067855,0.579728977403356,0,0,0,0,0.448026887097336,0.280888840263504,0.852151612890289,0.779358013808606,0.35333957451034,0.563373679106722,0,0,0,0.216491041011214,0.760079596425296,0.505524445014783,0.79928715803342,0.258937883647172,0.593768556259299,0.346970653532272,0.913396434936424,1.15307748628029,0.904335843315735,1.41106448562846,0.502666365318702,0.494389935468748,1.15679485535929,0,1.13236794963186,0.220841518460394,0.484875253135222,1.86391761218122,1.17112318804619,1.67557365450764,0,0.11981512450592,0,0.127070227073065,1.3481157546434,0.457500602818626,1.13088916901578,3.30266208365325,1.02286182932132,1.87009240103604,2.10913641988085,0.305518091550949,0.373220911830279,0.758168275301024,0.420883711772948,1.17108398666433,1.37941262660084,0.900310649026746,1.35634336052144,1.15662048557257,0.640568601424249,0.843315521037559,1.03481348295606,0.431135985865684,1.13463648100692,0.879755620819744,1.31517439456545,0.556094498451196,0.696504333044333,0.61734640922383,0.796137067273973,0,0.257347907114715,0,0.414251545071004,0.938104239924385,1.08037236876609,0.946978942340841,0.983821158737019,0.617068451549513,0.465067889500816,0.268273401399619,0.700592054203017,0.822799249567402,0.985004784474571,0.56748166682099,1.02339991197733,0.439100230582101,0.671032093801859,2.10289948564127,1.74937841044784,0.330418782983798,0.528901133327089,0.213288250535234,0.696710015581316,0.902072229254653,0.605050573870028,0.444756087689741,0.380451252225118,0,0.329397909448022,0.502670417600539,0.198956472041151,0.19496408711912,0,0.864552199498777,1.1948476395262,0,1.02823661348756,1.1270773567308,0.610953983535943,0.969762435838129,0.701358198903186,0.69560190836683,0.442830443938806,0.941992367048249,1.23397163921801,0,0,0.393117990226406,0,0.608580364165509,0.241177159752417,0.25462585178142,0.575392274901621,0.162135226775035,0.549122826376163,1.43768206527355,1.11642284300551,0,0.757736633841335,0.358794827043824,0.482443521363367,0.923765950833023,0.947457058852424,0.325929952884052,0.509235257325564,0.704070744865506,1.00503754465089,0.476087281772027,0.975668239288994,1.7339865851681,0.664394068946325,1.2756381492599,1.96635977658886,0.863424909329478,0.433947175744535,1.50791283939272,0,0.491764273019036,0.827810238914197,1.60550589987792,2.22702204525186,0.983609672260053,0.757412781613119,1.57754109708128,0,0.646270193198397,0.955875191810208,0.668396022247182,0.566153061577665,1.61924280669958,0.876767573733936,0.790575555893047,0.642642632843614,0.851640511249612,0.178065603667255,0.81443479676788,0.659880491890142,0,0.728341908464944,0,0.377210159511796,0,0,0.258428293168221,0.363533729477506,0,0.316036757935816,0,1.03135543248187,2.04263763452273,0.36012218806262,0.388076051348264,0.214337035031592,0.709360934569094,0.713475270408282,0.987294123612726,0.304464949114599,0.469343416127421,0,0.882113592219848,1.15420377059036,0.322928853391811,0.542816324353403,0.477489376012546,0.984845398470368,0,2.22510362412612,0.170870880797853,0.206386867963223,0.370389054739423,0.188368457004691,0.27338845544205,0,0.169978429993855,0.279902904647316,0.414599921413271,0.954670618015114,1.10717597753397,0.406638934253697,0.756037385752609,0.418176592028937,0.436725127492355,0.944050424693745,0.826534557253359,0.785267825952089,0.129614973291793,0,0.56369293868419,0.598066184175915,0.827292452285488,0.777804753376191,1.16243841129958,1.01373675294467,1.40828686374905,0.5208175393758,0.734015410979976,0.966336483304024,1.15212002503146,0.632022241256357,0.405450430580328,0.205421914329655,0.909445760844565,1.07416017400489,0.596044064343795,0.961563596159751,0.147689527174577,0.504832249740738,0.762068066549998,0.604957110821043,0.292373642219257,0.288635524920988,0.233753804363138,0.453460767230423,1.10992976687032,1.07656627931371,0.335769232728157,0.772758376128762,1.12609485270709,0.36630324853453,0.214368379079066,0,1.6942555278512,1.84130094602871,1.71868654031819,1.5466786410931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| |||
|short_description=p3@D3Ertd254e | |||
}} |
Revision as of 10:10, 6 August 2015
Short description: | p3@D3Ertd254e |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_D3Ertd254e_5end |
Coexpression cluster: | NA |
Association with transcript: | 33bp_to_NM_001101478, uc008ozg.2_5end |
EntrezGene: | 241944 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectoderm | 5.66e-11 | 64 |
neural plate | 5.66e-11 | 64 |
presumptive neural plate | 5.66e-11 | 64 |
ecto-epithelium | 1.54e-09 | 73 |
neural tube | 2.02e-08 | 52 |
neural rod | 2.02e-08 | 52 |
future spinal cord | 2.02e-08 | 52 |
neural keel | 2.02e-08 | 52 |
regional part of brain | 5.40e-08 | 46 |
structure with developmental contribution from neural crest | 5.60e-08 | 92 |
regional part of nervous system | 9.39e-08 | 54 |
pre-chordal neural plate | 1.02e-07 | 49 |
brain | 1.03e-07 | 47 |
future brain | 1.03e-07 | 47 |
occipital lobe | 3.50e-07 | 10 |
visual cortex | 3.50e-07 | 10 |
neocortex | 3.50e-07 | 10 |
ectoderm-derived structure | 5.64e-07 | 95 |
ectoderm | 5.64e-07 | 95 |
presumptive ectoderm | 5.64e-07 | 95 |