Personal tools

FFCP PHASE1:Mm9::chr5:13399387..13399415,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP|EntrezGene=20346|HGNC=|MCL_coexpression_id=2416|UniProt=O08665|association_with_transcript=78bp_to_ENSMUST00000030714,NM_009152,uc008wmc.2_5end|description=CAGE_peak_3_at_Sema3a_5end|id=chr5:13399387..13399415,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002048!4.46e-10!14;UBERON:0000117!4.46e-10!14;UBERON:0000171!4.46e-10!14;UBERON:0000170!4.46e-10!14;UBERON:0005597!4.46e-10!14;UBERON:0000118!4.46e-10!14;UBERON:0003056!6.81e-08!49;UBERON:0002346!1.96e-07!71;UBERON:0003075!1.96e-07!71;UBERON:0007284!1.96e-07!71;UBERON:0002021!1.99e-07!10;UBERON:0000411!1.99e-07!10;UBERON:0001950!1.99e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0002048,1.72e-11,14;UBERON:0000117,1.72e-11,14;UBERON:0000171,1.72e-11,14;UBERON:0000170,1.72e-11,14;UBERON:0005597,1.72e-11,14;UBERON:0000118,1.72e-11,14;UBERON:0002021,2.09e-08,10;UBERON:0000411,2.09e-08,10;UBERON:0001950,2.09e-08,10;UBERON:0005153,3.22e-08,17;UBERON:0005178,3.22e-08,17;UBERON:0005181,3.22e-08,17;UBERON:0002224,3.22e-08,17;UBERON:0000915,3.22e-08,17;UBERON:0008947,3.22e-08,17;UBERON:0003258,3.22e-08,17;UBERON:0000956,3.72e-07,21;UBERON:0001869,3.72e-07,21;UBERON:0000203,3.72e-07,21;UBERON:0002346,5.18e-07,64;UBERON:0003075,5.18e-07,64;UBERON:0007284,5.18e-07,64;UBERON:0003056,6.18e-07,49|phase1_expression=1.44133962394315,0,0,0,0,0,0,0,0,0,0,0,0,0,0.666219523631325,1.01237633694913,0,0,0,0,1.27564935226605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.02869817521847,4.35920804243913,10.6457116253775,3.12956537739216,0,0.439372365468944,0,0.699932108126813,0,0,0,0,0.771778308107841,0,0.515672092277442,2.02316460859598,0,0,1.35537812827653,1.77858959222228,0,0,0,0.898800331555214,0.384218305321555,2.17748185847803,1.4850653216486,2.10324961351382,2.85650984403804,1.32521124570968,2.81728838194394,1.53352753629178,3.67687514644008,0,0.127687338085188,0,0.527545150920775,0.274462930807229,0.52091337055676,0.558365998002762,1.68828783009504,0.45839474333043,5.00868595305235,3.27454865837937,2.05039390407831,0.075726193333184,0.0755715601067855,0.289864488701678,0.860423876981386,0,0,0,0,0.421333260395256,0.511290967734173,0.779358013808606,1.41335829804136,3.80277233397037,1.28326477414318,5.09610479413291,0,0,0,0,0.45673551887624,2.84831672011889,0,2.60227990149204,2.13125834818499,0.461230994512117,0.452167921657868,0.470354828542819,0,0,0.578397427679647,0,2.26473589926373,0.662524555381181,0.484875253135222,0,0.585561594023094,1.04723353406728,0,0,0,0,0.149790639404823,0.915001205637253,2.76439574648302,2.60736480288415,3.83573185995496,0.41557608911912,1.46017136760982,2.85150218780886,0.870848794270651,0,0.420883711772948,3.6433724029557,4.13823787980251,3.42118046630164,3.91832526372859,2.99360596265843,1.66547836370305,2.52994656311268,2.32833033665114,0.431135985865684,2.26927296201383,1.40760899331159,2.6303487891309,1.94633074457919,2.089512999133,2.67516777330327,3.98068533636986,0,0,0,2.07125772535502,2.57978665979206,1.44049649168812,2.3674473558521,1.18058539048442,0.925602677324269,1.39520366850245,0,0.934122738937356,0.658239399653922,0,0,0.146199987425332,0.658650345873152,0,0,1.54356918568927,0,0,3.62590025909898,5.80591679651096,1.9330119198314,1.00841762311671,0.667134131534611,0.760902504450237,0,0.494096864172033,0.502670417600539,0,0.58489226135736,0,0.432276099749388,0,0.758671603812327,2.28497025219458,1.1270773567308,3.05476991767971,1.55161989734101,1.8936671370386,1.39120381673366,0.147610147979602,0,0.246794327843601,0,0.83422552858047,0.786235980452812,0.449724224769707,0.608580364165509,0,0.25462585178142,0.287696137450811,0.162135226775035,0,0,0.744281895337007,0.312037673114561,0,0,0,4.98833613449833,6.82169082373745,5.86673915191293,5.60158783058121,5.16318546234705,5.3602002381381,4.99891645860629,8.58588050574315,7.25121662888479,5.75808193086815,5.42146213435456,4.58817281204066,7.59813920209941,4.05017364028232,0,0,0,0,1.28440471990234,0.703270119553219,1.3114795630134,1.26235463602186,0.631016438832513,1.17131623288992,0.215423397732799,0.477937595905104,0.222798674082394,0.566153061577665,0.404810701674894,1.46127928955656,1.18586333383957,5.14114106274891,1.13552068166615,4.45164009168138,5.04949573996086,2.63952196756057,0,1.69946445308487,1.51161778482376,0.943025398779491,0.295301892880773,0.614870295887855,0.258428293168221,1.09060118843252,0.356497378384721,0,1.05418608574999,0,0.340439605753788,3.06103859853227,0.776152102696527,4.07240366560025,2.48276327099183,2.85390108163313,1.97458824722545,1.522324745573,0,0.42366414172764,0,0.49465875882444,1.29171541356724,1.62844897306021,1.07435109602823,0.820704498725306,0.291480836629851,1.11255181206306,0.512612642393558,3.09580301944834,2.22233432843654,0.565105371014073,0.546776910884101,0.686334519619568,0,0,0,0.954670618015114,3.95419991976419,4.26970880966382,2.91614420218863,3.97267762427491,2.40198820120795,3.64133735239016,1.32245529160537,1.04702376793612,0.518459893167171,0,0,1.79419855252775,0.66183396182839,1.16670713006429,1.29159823477731,0.675824501963113,1.76035857968631,0.5208175393758,0,0.241584120826006,0.288030006257865,0.316011120628178,1.01362607645082,0.616265742988964,0,0.358053391334963,0.198681354781265,0.360586348559907,0,0,0.0762068066549998,0,0.194915761479505,0,0,0.226730383615211,0,0,0,5.21611903886914,3.75364950902364,2.93042598827624,0.428736758158132,0,9.03602948187307,3.22227665555024,8.59343270159095,7.38968684077857,3.42541259885321,7.55393897389701,5.40018000185445,5.85417564191487,4.53142408984205,6.73088405277366,1.24544817101012,1.99512436700516,3.92687293234509,2.18796045361465,0.838452650511929,0.735374033800057,2.889207461421,2.26638562962784,1.92551525755089,2.02157769411038,1.52087579934144,2.07488975524684,2.52832070168682,2.04880487695582,1.95280594449085,4.28664322154766,1.73826488917283,1.35036454324594,1.23625770240992,1.61918812147837,3.08582327146874,3.54951612318675,2.38436189947321,2.32554266611726,2.07040636913727,2.03075058940024,2.19513567447327,3.94604567156764,2.44447404922551,3.36685362994643,2.84724043498018,1.87158516513571,4.09231043169689,2.16911577660352,3.47231899766054,1.24905288968973,3.04111090979031,1.93383948643468,1.53030665655075,1.76473135295612,1.15933917810211|short_description=p3@Sema3a}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:20346
|HGNC=
|MCL_coexpression_id=2416
|TSSclassifier=NA
|UniProt=uniprot:O08665
|association_with_transcript=78bp_to_ENSMUST00000030714,NM_009152,uc008wmc.2_5end
|cluster_id=chr5:13399387..13399415,+
|description=CAGE_peak_3_at_Sema3a_5end
|id=chr5:13399387..13399415,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002048!4.46e-10!14;UBERON:0000117!4.46e-10!14;UBERON:0000171!4.46e-10!14;UBERON:0000170!4.46e-10!14;UBERON:0005597!4.46e-10!14;UBERON:0000118!4.46e-10!14;UBERON:0003056!6.81e-08!49;UBERON:0002346!1.96e-07!71;UBERON:0003075!1.96e-07!71;UBERON:0007284!1.96e-07!71;UBERON:0002021!1.99e-07!10;UBERON:0000411!1.99e-07!10;UBERON:0001950!1.99e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0002048,1.72e-11,14;UBERON:0000117,1.72e-11,14;UBERON:0000171,1.72e-11,14;UBERON:0000170,1.72e-11,14;UBERON:0005597,1.72e-11,14;UBERON:0000118,1.72e-11,14;UBERON:0002021,2.09e-08,10;UBERON:0000411,2.09e-08,10;UBERON:0001950,2.09e-08,10;UBERON:0005153,3.22e-08,17;UBERON:0005178,3.22e-08,17;UBERON:0005181,3.22e-08,17;UBERON:0002224,3.22e-08,17;UBERON:0000915,3.22e-08,17;UBERON:0008947,3.22e-08,17;UBERON:0003258,3.22e-08,17;UBERON:0000956,3.72e-07,21;UBERON:0001869,3.72e-07,21;UBERON:0000203,3.72e-07,21;UBERON:0002346,5.18e-07,64;UBERON:0003075,5.18e-07,64;UBERON:0007284,5.18e-07,64;UBERON:0003056,6.18e-07,49
|phase1_expression=1.44133962394315,0,0,0,0,0,0,0,0,0,0,0,0,0,0.666219523631325,1.01237633694913,0,0,0,0,1.27564935226605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.02869817521847,4.35920804243913,10.6457116253775,3.12956537739216,0,0.439372365468944,0,0.699932108126813,0,0,0,0,0.771778308107841,0,0.515672092277442,2.02316460859598,0,0,1.35537812827653,1.77858959222228,0,0,0,0.898800331555214,0.384218305321555,2.17748185847803,1.4850653216486,2.10324961351382,2.85650984403804,1.32521124570968,2.81728838194394,1.53352753629178,3.67687514644008,0,0.127687338085188,0,0.527545150920775,0.274462930807229,0.52091337055676,0.558365998002762,1.68828783009504,0.45839474333043,5.00868595305235,3.27454865837937,2.05039390407831,0.075726193333184,0.0755715601067855,0.289864488701678,0.860423876981386,0,0,0,0,0.421333260395256,0.511290967734173,0.779358013808606,1.41335829804136,3.80277233397037,1.28326477414318,5.09610479413291,0,0,0,0,0.45673551887624,2.84831672011889,0,2.60227990149204,2.13125834818499,0.461230994512117,0.452167921657868,0.470354828542819,0,0,0.578397427679647,0,2.26473589926373,0.662524555381181,0.484875253135222,0,0.585561594023094,1.04723353406728,0,0,0,0,0.149790639404823,0.915001205637253,2.76439574648302,2.60736480288415,3.83573185995496,0.41557608911912,1.46017136760982,2.85150218780886,0.870848794270651,0,0.420883711772948,3.6433724029557,4.13823787980251,3.42118046630164,3.91832526372859,2.99360596265843,1.66547836370305,2.52994656311268,2.32833033665114,0.431135985865684,2.26927296201383,1.40760899331159,2.6303487891309,1.94633074457919,2.089512999133,2.67516777330327,3.98068533636986,0,0,0,2.07125772535502,2.57978665979206,1.44049649168812,2.3674473558521,1.18058539048442,0.925602677324269,1.39520366850245,0,0.934122738937356,0.658239399653922,0,0,0.146199987425332,0.658650345873152,0,0,1.54356918568927,0,0,3.62590025909898,5.80591679651096,1.9330119198314,1.00841762311671,0.667134131534611,0.760902504450237,0,0.494096864172033,0.502670417600539,0,0.58489226135736,0,0.432276099749388,0,0.758671603812327,2.28497025219458,1.1270773567308,3.05476991767971,1.55161989734101,1.8936671370386,1.39120381673366,0.147610147979602,0,0.246794327843601,0,0.83422552858047,0.786235980452812,0.449724224769707,0.608580364165509,0,0.25462585178142,0.287696137450811,0.162135226775035,0,0,0.744281895337007,0.312037673114561,0,0,0,4.98833613449833,6.82169082373745,5.86673915191293,5.60158783058121,5.16318546234705,5.3602002381381,4.99891645860629,8.58588050574315,7.25121662888479,5.75808193086815,5.42146213435456,4.58817281204066,7.59813920209941,4.05017364028232,0,0,0,0,1.28440471990234,0.703270119553219,1.3114795630134,1.26235463602186,0.631016438832513,1.17131623288992,0.215423397732799,0.477937595905104,0.222798674082394,0.566153061577665,0.404810701674894,1.46127928955656,1.18586333383957,5.14114106274891,1.13552068166615,4.45164009168138,5.04949573996086,2.63952196756057,0,1.69946445308487,1.51161778482376,0.943025398779491,0.295301892880773,0.614870295887855,0.258428293168221,1.09060118843252,0.356497378384721,0,1.05418608574999,0,0.340439605753788,3.06103859853227,0.776152102696527,4.07240366560025,2.48276327099183,2.85390108163313,1.97458824722545,1.522324745573,0,0.42366414172764,0,0.49465875882444,1.29171541356724,1.62844897306021,1.07435109602823,0.820704498725306,0.291480836629851,1.11255181206306,0.512612642393558,3.09580301944834,2.22233432843654,0.565105371014073,0.546776910884101,0.686334519619568,0,0,0,0.954670618015114,3.95419991976419,4.26970880966382,2.91614420218863,3.97267762427491,2.40198820120795,3.64133735239016,1.32245529160537,1.04702376793612,0.518459893167171,0,0,1.79419855252775,0.66183396182839,1.16670713006429,1.29159823477731,0.675824501963113,1.76035857968631,0.5208175393758,0,0.241584120826006,0.288030006257865,0.316011120628178,1.01362607645082,0.616265742988964,0,0.358053391334963,0.198681354781265,0.360586348559907,0,0,0.0762068066549998,0,0.194915761479505,0,0,0.226730383615211,0,0,0,5.21611903886914,3.75364950902364,2.93042598827624,0.428736758158132,0,9.03602948187307,3.22227665555024,8.59343270159095,7.38968684077857,3.42541259885321,7.55393897389701,5.40018000185445,5.85417564191487,4.53142408984205,6.73088405277366,1.24544817101012,1.99512436700516,3.92687293234509,2.18796045361465,0.838452650511929,0.735374033800057,2.889207461421,2.26638562962784,1.92551525755089,2.02157769411038,1.52087579934144,2.07488975524684,2.52832070168682,2.04880487695582,1.95280594449085,4.28664322154766,1.73826488917283,1.35036454324594,1.23625770240992,1.61918812147837,3.08582327146874,3.54951612318675,2.38436189947321,2.32554266611726,2.07040636913727,2.03075058940024,2.19513567447327,3.94604567156764,2.44447404922551,3.36685362994643,2.84724043498018,1.87158516513571,4.09231043169689,2.16911577660352,3.47231899766054,1.24905288968973,3.04111090979031,1.93383948643468,1.53030665655075,1.76473135295612,1.15933917810211
|short_description=p3@Sema3a
}}

Revision as of 09:27, 6 August 2015

Short description:p3@Sema3a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Sema3a_5end
Coexpression cluster:MCL_coexpression_mm9:2416
Association with transcript: 78bp_to_ENSMUST00000030714, NM_009152, uc008wmc.2_5end
EntrezGene:20346
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Sema3a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.01
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.28
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D84.03
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D94.36
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B310.65
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.13
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.70
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.77
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C32.02
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.36
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.18
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.49
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.10
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.33
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.82
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.53
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.53
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.27
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.46
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.01
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.27
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.05
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.41
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G63.80
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H92.85
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C52.60
adrenal gland, embryo E16.CNhs11004.1254-43D62.13
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.58
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F52.26
bone (os femoris), neonate N16.CNhs11225.1525-43A60.66
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I21.05
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F12.76
cortex, adult.CNhs10473.12-14D52.61
cortex, neonate N30.CNhs11107.1392-42F23.84
diencephalon, adult.CNhs10482.20-12F20.42
diencephalon, neonate N30.CNhs11201.1388-42B21.46
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.85
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.87
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C63.64
eyeball, embryo E14.CNhs10521.399-16E24.14
eyeball, embryo E15.CNhs10593.426-16C93.42
eyeball, embryo E17.CNhs11023.1261-18D43.92
eyeball, neonate N00.CNhs11207.633-15C62.99
eyeball, neonate N01.CNhs11140.1532-43E71.67
eyeball, neonate N02.CNhs11205.1551-44G82.53
eyeball, neonate N16.CNhs11188.777-19A22.33
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H22.27
forelimb, embryo E13.CNhs10589.384-1E21.41
forelimb, embryo E14.CNhs10577.413-26A82.63
forelimb, embryo E15.CNhs11007.437-20E71.95
forelimb, embryo E17.CNhs10598.1517-43C42.09
forelimb, embryo E18.CNhs11008.1520-43B52.68
gonad, embryo E13.CNhs11044.1564-45I63.98
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E92.07
heart, embryo E12.CNhs11015.353-12F52.58
heart, embryo E13.CNhs11013.376-3I91.44
heart, embryo E14.CNhs10597.403-26D42.37
heart, embryo E15.CNhs11017.431-16C81.18
heart, embryo E16.CNhs11021.457-17C60.93
heart, embryo E17.CNhs11025.479-18E51.40
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.93
heart, neonate N03.CNhs11221.1349-25I20.66
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.66
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G11.54
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I53.63
intestine, embryo E13.CNhs11010.381-16D55.81
intestine, embryo E15.CNhs10602.976-16D81.93
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.76
kidney, embryo E15.CNhs10997.434-16F82.28
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I23.05
kidney, embryo E18.CNhs11001.1288-20C71.55
kidney, neonate N00.CNhs11214.646-21G71.89
kidney, neonate N10.CNhs11206.758-6D51.39
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.83
liver, embryo E13.CNhs10524.378-3H60.79
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.61
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B14.99
lung, embryo E12.CNhs10522.354-16G26.82
lung, embryo E14.CNhs10604.404-26F85.87
lung, embryo E15.CNhs11020.432-17C55.60
lung, embryo E16.CNhs10998.458-17B65.16
lung, embryo E17.CNhs10605.480-44A65.36
lung, embryo E18.CNhs10583.1287-20I65.00
lung, neonate N00.CNhs11224.640-42C68.59
lung, neonate N06.CNhs11212.683-20E57.25
lung, neonate N07.CNhs11111.715-19A35.76
lung, neonate N10.CNhs11219.750-23E65.42
lung, neonate N20.CNhs11109.822-18A44.59
lung, neonate N25.CNhs11119.1359-25C77.60
lung, neonate N30.CNhs11133.1394-42H24.05
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C21.28
medulla oblongata, neonate N30.CNhs11200.1396-42A30.70
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.31
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.26
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.46
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I95.14
ovary, adult.CNhs10507.91-2I71.14
ovary, embryo E18.CNhs11040.505-44H74.45
ovary, neonate N00.CNhs11217.1299-22I45.05
oviduct, adult pregnant day01.CNhs10500.988-6G62.64
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.70
pancreas, embryo E15.CNhs11042.1556-45F21.51
pancreas, embryo E16.CNhs11003.460-26E50.94
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E63.06
pituitary gland, embryo E13.CNhs11009.370-44C70.78
pituitary gland, embryo E14.CNhs11037.398-44A54.07
pituitary gland, embryo E15.CNhs10592.427-16B92.48
pituitary gland, embryo E16.CNhs11036.449-43F62.85
pituitary gland, embryo E17.CNhs11039.1265-44F51.97
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G41.29
skin, neonate N03.CNhs11215.662-22H31.63
skin, neonate N06.CNhs11097.693-20I51.07
skin, neonate N10.CNhs11108.762-6C40.82
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C91.11
spleen, adult.CNhs10465.25-2G20.51
spleen, embryo E16.CNhs11035.461-43C13.10
spleen, embryo E18.CNhs11011.1271-21F22.22
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H10.55
spleen, neonate N25.CNhs11099.1354-25G30.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E33.95
stomach, embryo E15.CNhs10603.1252-16G84.27
stomach, embryo E16.CNhs11022.459-17D42.92
stomach, embryo E17.CNhs11006.1035-18D53.97
stomach, embryo E18.CNhs10999.1286-20C62.40
stomach, neonate N03.CNhs11193.1340-24B83.64
stomach, neonate N07.CNhs11210.718-18A91.32
stomach, neonate N25.CNhs11104.1355-25E41.05
stomach, neonate N30.CNhs11134.1386-42I10.52
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.79
testis, embryo E15.CNhs11034.443-27C50.66
testis, embryo E16.CNhs11033.470-26G51.17
testis, embryo E17.CNhs11029.486-18I51.29
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B71.76
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I41.01
thymus, embryo E15.CNhs11005.430-45I20.62
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E45.22
uterus, adult pregnant day19.CNhs10497.590-15F53.75
uterus, adult.CNhs10509.92-27E52.93
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A19.04
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.22
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A38.59
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D77.39
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A43.43
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A57.55
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A65.40
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A75.85
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.53
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A96.73
whole body, embryo E11.CNhs11014.324-5I81.25
whole body, embryo E12.CNhs10587.857-27C92.00
whole body, embryo E13.CNhs10512.372-23H23.93
whole body, embryo E14.5.CNhs10578.420-27D22.19
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.95
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.62
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.55
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.33
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.20
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.95
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.44
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.85
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.87
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.09
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.17
whole body, embryo E17.5.CNhs10513.490-9F93.47
whole body, embryo E17.CNhs10517.475-3I51.25
whole body, embryo E18.CNhs10516.493-3B33.04
whole body, neonate N00.CNhs10525.657-19C21.93
whole body, neonate N01.CNhs10576.659-23C61.53
whole body, neonate N06.CNhs10515.692-21D11.76
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
lung1.72e-1114
respiratory tube1.72e-1114
respiration organ1.72e-1114
pair of lungs1.72e-1114
lung primordium1.72e-1114
lung bud1.72e-1114
occipital lobe2.09e-0810
visual cortex2.09e-0810
neocortex2.09e-0810
epithelial bud3.22e-0817
thoracic cavity element3.22e-0817
thoracic segment organ3.22e-0817
thoracic cavity3.22e-0817
thoracic segment of trunk3.22e-0817
respiratory primordium3.22e-0817
endoderm of foregut3.22e-0817
cerebral cortex3.72e-0721
cerebral hemisphere3.72e-0721
pallium3.72e-0721
neurectoderm5.18e-0764
neural plate5.18e-0764
presumptive neural plate5.18e-0764
pre-chordal neural plate6.18e-0749
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr5:13399387..13399415,%2B&oldid=4004860"