FFCP PHASE1:Mm9::chr13:88961187..88961196,+: Difference between revisions
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{{FFCP|EntrezGene=13612|HGNC=|MCL_coexpression_id=1|UniProt=|association_with_transcript=22bp_to_,-22bp_to_ENSMUST00000133761,ENSMUST00000137921_5end|description=CAGE_peak_9_at_Edil3_5end|id=chr13:88961187..88961196,+|ontology_enrichment_celltype=CL:0000117!1.25e-13!23;CL:0000337!1.25e-13!23;CL:0000540!3.91e-13!33;CL:0000047!3.91e-13!33;CL:0000031!3.91e-13!33;CL:0000404!3.91e-13!33;CL:0000393!1.38e-09!39;CL:0000211!1.38e-09!39;CL:0000221!2.14e-09!44;CL:0000133!2.14e-09!44;CL:0002319!3.02e-09!43|ontology_enrichment_celltype_v019_2=CL:0000117,1.30e-14,23;CL:0000337,1.30e-14,23;CL:0000540,7.94e-11,33;CL:0000047,7.94e-11,33;CL:0000031,7.94e-11,33;CL:0000404,7.94e-11,33;CL:0000393,1.09e-08,39;CL:0000211,1.09e-08,39;CL:0002610,1.75e-08,3;CL:0002614,7.73e-08,3;CL:0002319,1.33e-07,43;CL:0000221,2.31e-07,44;CL:0000133,2.31e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.22e-25!73;UBERON:0005743!1.22e-25!73;UBERON:0000073!2.49e-25!75;UBERON:0001016!2.49e-25!75;UBERON:0002346!3.24e-23!71;UBERON:0003075!3.24e-23!71;UBERON:0007284!3.24e-23!71;UBERON:0000033!6.66e-23!63;UBERON:0001049!1.18e-22!52;UBERON:0005068!1.18e-22!52;UBERON:0006241!1.18e-22!52;UBERON:0007135!1.18e-22!52;UBERON:0004121!1.54e-22!102;UBERON:0000924!1.54e-22!102;UBERON:0006601!1.54e-22!102;UBERON:0003056!1.22e-21!49;UBERON:0000955!1.75e-21!50;UBERON:0006238!1.75e-21!50;UBERON:0002020!5.87e-21!34;UBERON:0002616!8.63e-21!49;UBERON:0003080!2.02e-18!40;UBERON:0002780!1.66e-17!39;UBERON:0001890!1.66e-17!39;UBERON:0006240!1.66e-17!39;UBERON:0002791!3.04e-17!29;UBERON:0003528!3.04e-17!29;UBERON:0001893!3.04e-17!29;UBERON:0007811!2.45e-12!86;UBERON:0000153!9.00e-12!94;UBERON:0000956!2.68e-11!21;UBERON:0001869!2.68e-11!21;UBERON:0000203!2.68e-11!21;UBERON:0002021!3.96e-10!10;UBERON:0000411!3.96e-10!10;UBERON:0001950!3.96e-10!10;UBERON:0002619!8.10e-09!17;UBERON:0002420!2.44e-07!8;UBERON:0007245!2.44e-07!8;UBERON:0010009!2.44e-07!8;UBERON:0010011!2.44e-07!8;UBERON:0000454!2.44e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.10e-34,54;UBERON:0001017,1.42e-31,73;UBERON:0001016,1.54e-30,75;UBERON:0001049,2.05e-30,52;UBERON:0005068,2.05e-30,52;UBERON:0006241,2.05e-30,52;UBERON:0007135,2.05e-30,52;UBERON:0002020,1.93e-29,34;UBERON:0003528,9.32e-29,29;UBERON:0002791,9.32e-29,29;UBERON:0001893,9.32e-29,29;UBERON:0002616,3.23e-27,46;UBERON:0003080,6.55e-27,40;UBERON:0000955,1.64e-26,47;UBERON:0006238,1.64e-26,47;UBERON:0002346,2.25e-25,64;UBERON:0003075,2.25e-25,64;UBERON:0007284,2.25e-25,64;UBERON:0002780,6.11e-25,39;UBERON:0001890,6.11e-25,39;UBERON:0006240,6.11e-25,39;UBERON:0004121,3.65e-24,95;UBERON:0000924,3.65e-24,95;UBERON:0006601,3.65e-24,95;UBERON:0002021,1.61e-23,10;UBERON:0000411,1.61e-23,10;UBERON:0001950,1.61e-23,10;UBERON:0003056,6.29e-23,49;UBERON:0010371,2.00e-21,73;UBERON:0000956,1.01e-19,21;UBERON:0001869,1.01e-19,21;UBERON:0000203,1.01e-19,21;UBERON:0002619,1.58e-18,17;UBERON:0010314,1.26e-15,92;UBERON:0000025,2.39e-10,114;UBERON:0002950,3.05e-10,4;UBERON:0001891,3.05e-10,4;UBERON:0009616,3.05e-10,4;UBERON:0010286,3.05e-10,4;UBERON:0002420,4.57e-10,8;UBERON:0007245,4.57e-10,8;UBERON:0010009,4.57e-10,8;UBERON:0010011,4.57e-10,8;UBERON:0000454,4.57e-10,8;UBERON:0004111,2.99e-09,122;UBERON:0004684,1.75e-08,3;UBERON:0002275,1.75e-08,3;UBERON:0002038,7.73e-08,3;UBERON:0009663,7.73e-08,3;UBERON:0009661,7.73e-08,3;UBERON:0000125,7.73e-08,3;UBERON:0002308,7.73e-08,3;UBERON:0011216,2.87e-07,194|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61853168687678,0,1.90149421051854,1.35537812827653,0,0,0,0,0.299600110518405,0,0.829516898467821,1.62007125998029,0.420649922702764,0.856952953211411,0.883474163806454,0.489963196859816,0.0958454710182364,0,3.30347642998166,1.91531007127782,3.22573719838111,0.923204014111357,1.37231465403614,1.04182674111352,1.67509799400829,2.25105044012672,2.13917546887534,2.94628585473668,1.70846016958924,0.931997229126503,0,0.226714680320357,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0.150722640552623,0.23517741427141,0,0,0,0,0,0,0.484875253135222,0,0,0.41889341362691,0,0,0,0,3.2953940669061,3.66000482254901,0.502617408451458,1.73824320192276,1.79000820131231,1.87009240103604,2.10913641988085,0.305518091550949,0,0,0,0.260240885925407,0.689706313300419,0.900310649026746,0.150704817835715,0.408218994907967,0.384341160854549,0.562210347358373,1.29351685369508,0.646703978798527,0.378212160335639,0,0,0,0,0.205782136407943,0.398068533636986,0,0,0,0.207125772535502,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68231958851302,1.74937841044784,0,0,0.213288250535234,0.232236671860439,0,0.201683524623343,0.22237804384487,0.190225626112559,0,0,0,0,0.19496408711912,0,0,0,0,0,1.1270773567308,0,0,0,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0.476087281772027,0.195133647857799,0,0.221464689648775,0.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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:13612 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=22bp_to_,-22bp_to_ENSMUST00000133761,ENSMUST00000137921_5end | |||
|cluster_id=chr13:88961187..88961196,+ | |||
|description=CAGE_peak_9_at_Edil3_5end | |||
|id=chr13:88961187..88961196,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.25e-13!23;CL:0000337!1.25e-13!23;CL:0000540!3.91e-13!33;CL:0000047!3.91e-13!33;CL:0000031!3.91e-13!33;CL:0000404!3.91e-13!33;CL:0000393!1.38e-09!39;CL:0000211!1.38e-09!39;CL:0000221!2.14e-09!44;CL:0000133!2.14e-09!44;CL:0002319!3.02e-09!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.30e-14,23;CL:0000337,1.30e-14,23;CL:0000540,7.94e-11,33;CL:0000047,7.94e-11,33;CL:0000031,7.94e-11,33;CL:0000404,7.94e-11,33;CL:0000393,1.09e-08,39;CL:0000211,1.09e-08,39;CL:0002610,1.75e-08,3;CL:0002614,7.73e-08,3;CL:0002319,1.33e-07,43;CL:0000221,2.31e-07,44;CL:0000133,2.31e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.22e-25!73;UBERON:0005743!1.22e-25!73;UBERON:0000073!2.49e-25!75;UBERON:0001016!2.49e-25!75;UBERON:0002346!3.24e-23!71;UBERON:0003075!3.24e-23!71;UBERON:0007284!3.24e-23!71;UBERON:0000033!6.66e-23!63;UBERON:0001049!1.18e-22!52;UBERON:0005068!1.18e-22!52;UBERON:0006241!1.18e-22!52;UBERON:0007135!1.18e-22!52;UBERON:0004121!1.54e-22!102;UBERON:0000924!1.54e-22!102;UBERON:0006601!1.54e-22!102;UBERON:0003056!1.22e-21!49;UBERON:0000955!1.75e-21!50;UBERON:0006238!1.75e-21!50;UBERON:0002020!5.87e-21!34;UBERON:0002616!8.63e-21!49;UBERON:0003080!2.02e-18!40;UBERON:0002780!1.66e-17!39;UBERON:0001890!1.66e-17!39;UBERON:0006240!1.66e-17!39;UBERON:0002791!3.04e-17!29;UBERON:0003528!3.04e-17!29;UBERON:0001893!3.04e-17!29;UBERON:0007811!2.45e-12!86;UBERON:0000153!9.00e-12!94;UBERON:0000956!2.68e-11!21;UBERON:0001869!2.68e-11!21;UBERON:0000203!2.68e-11!21;UBERON:0002021!3.96e-10!10;UBERON:0000411!3.96e-10!10;UBERON:0001950!3.96e-10!10;UBERON:0002619!8.10e-09!17;UBERON:0002420!2.44e-07!8;UBERON:0007245!2.44e-07!8;UBERON:0010009!2.44e-07!8;UBERON:0010011!2.44e-07!8;UBERON:0000454!2.44e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.10e-34,54;UBERON:0001017,1.42e-31,73;UBERON:0001016,1.54e-30,75;UBERON:0001049,2.05e-30,52;UBERON:0005068,2.05e-30,52;UBERON:0006241,2.05e-30,52;UBERON:0007135,2.05e-30,52;UBERON:0002020,1.93e-29,34;UBERON:0003528,9.32e-29,29;UBERON:0002791,9.32e-29,29;UBERON:0001893,9.32e-29,29;UBERON:0002616,3.23e-27,46;UBERON:0003080,6.55e-27,40;UBERON:0000955,1.64e-26,47;UBERON:0006238,1.64e-26,47;UBERON:0002346,2.25e-25,64;UBERON:0003075,2.25e-25,64;UBERON:0007284,2.25e-25,64;UBERON:0002780,6.11e-25,39;UBERON:0001890,6.11e-25,39;UBERON:0006240,6.11e-25,39;UBERON:0004121,3.65e-24,95;UBERON:0000924,3.65e-24,95;UBERON:0006601,3.65e-24,95;UBERON:0002021,1.61e-23,10;UBERON:0000411,1.61e-23,10;UBERON:0001950,1.61e-23,10;UBERON:0003056,6.29e-23,49;UBERON:0010371,2.00e-21,73;UBERON:0000956,1.01e-19,21;UBERON:0001869,1.01e-19,21;UBERON:0000203,1.01e-19,21;UBERON:0002619,1.58e-18,17;UBERON:0010314,1.26e-15,92;UBERON:0000025,2.39e-10,114;UBERON:0002950,3.05e-10,4;UBERON:0001891,3.05e-10,4;UBERON:0009616,3.05e-10,4;UBERON:0010286,3.05e-10,4;UBERON:0002420,4.57e-10,8;UBERON:0007245,4.57e-10,8;UBERON:0010009,4.57e-10,8;UBERON:0010011,4.57e-10,8;UBERON:0000454,4.57e-10,8;UBERON:0004111,2.99e-09,122;UBERON:0004684,1.75e-08,3;UBERON:0002275,1.75e-08,3;UBERON:0002038,7.73e-08,3;UBERON:0009663,7.73e-08,3;UBERON:0009661,7.73e-08,3;UBERON:0000125,7.73e-08,3;UBERON:0002308,7.73e-08,3;UBERON:0011216,2.87e-07,194 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61853168687678,0,1.90149421051854,1.35537812827653,0,0,0,0,0.299600110518405,0,0.829516898467821,1.62007125998029,0.420649922702764,0.856952953211411,0.883474163806454,0.489963196859816,0.0958454710182364,0,3.30347642998166,1.91531007127782,3.22573719838111,0.923204014111357,1.37231465403614,1.04182674111352,1.67509799400829,2.25105044012672,2.13917546887534,2.94628585473668,1.70846016958924,0.931997229126503,0,0.226714680320357,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0.150722640552623,0.23517741427141,0,0,0,0,0,0,0.484875253135222,0,0,0.41889341362691,0,0,0,0,3.2953940669061,3.66000482254901,0.502617408451458,1.73824320192276,1.79000820131231,1.87009240103604,2.10913641988085,0.305518091550949,0,0,0,0.260240885925407,0.689706313300419,0.900310649026746,0.150704817835715,0.408218994907967,0.384341160854549,0.562210347358373,1.29351685369508,0.646703978798527,0.378212160335639,0,0,0,0,0.205782136407943,0.398068533636986,0,0,0,0.207125772535502,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68231958851302,1.74937841044784,0,0,0.213288250535234,0.232236671860439,0,0.201683524623343,0.22237804384487,0.190225626112559,0,0,0,0,0.19496408711912,0,0,0,0,0,1.1270773567308,0,0,0,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0.476087281772027,0.195133647857799,0,0.221464689648775,0.478364305972461,0.163863314715738,0,0.144649058581512,0,0,0,0,2.0871576698413,1.17211686592203,0.491804836130026,0,0,0.390438744296638,0,0.477937595905104,0.445597348164788,0.283076530788832,0.404810701674894,1.16902343164525,0,0.963963949265421,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517434735131018,0.643011105094777,0,0.535106452806212,0.329098041204242,0,0,0,0,0,0,0,0,0,0,2.03967832211561,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0.216010681643603,0,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0,0,0,0,0,0,0,1.12950368523413,1.84130094602871,2.86447756719698,2.23409137046794,2.74033007908257,3.0215755895588,6.07520250208625,2.2516060161211,2.26571204492102,2.07104124700728,0.103787347584177,1.19707462020309,0.512200817262403,0.243106717068294,0,0.183843508450014,0,0.206035057238894,0.320919209591815,0,0.25347929989024,0.188626341386076,0.280924522409647,0.256100609619477,0.516919220600519,0,0.347652977834566,0.38581844092741,0.824171801606613,0,0.342869252385415,0,0.238436189947321,0.145346416632329,0.282328141245992,0.25384382367503,0.548783918618318,0,0.407412341537585,0,0.593175090620871,0.197008964751127,0.409231043169689,0.309873682371932,0.578719832943424,0.499621155875892,0,0,0.382576664137687,0.220591419119515,0 | |||
|short_description=p9@Edil3 | |||
}} |
Revision as of 09:24, 6 August 2015
Short description: | p9@Edil3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Edil3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 22bp_to_, -22bp_to_ENSMUST00000133761, ENSMUST00000137921_5end |
EntrezGene: | 13612 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.30e-14 | 23 |
neuroblast (sensu Vertebrata) | 1.30e-14 | 23 |
neuron | 7.94e-11 | 33 |
neuronal stem cell | 7.94e-11 | 33 |
neuroblast | 7.94e-11 | 33 |
electrically signaling cell | 7.94e-11 | 33 |
electrically responsive cell | 1.09e-08 | 39 |
electrically active cell | 1.09e-08 | 39 |
raphe nuclei neuron | 1.75e-08 | 3 |
neuron of the substantia nigra | 7.73e-08 | 3 |
neural cell | 1.33e-07 | 43 |
ectodermal cell | 2.31e-07 | 44 |
neurectodermal cell | 2.31e-07 | 44 |