FFCP PHASE1:Mm9::chr2:112347135..112347141,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=29|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:112347135..112347141,+|id=chr2:112347135..112347141,+|ontology_enrichment_celltype=CL:0000791!3.70e-21!9;CL:0000789!3.70e-21!9;CL:0002420!3.70e-21!9;CL:0002419!3.70e-21!9;CL:0000790!3.70e-21!9;CL:0000084!2.49e-17!11;CL:0000827!2.49e-17!11;CL:0000838!6.84e-16!12;CL:0000624!1.43e-15!8;CL:0000542!1.13e-14!13;CL:0000051!1.13e-14!13;CL:0002031!2.67e-14!25;CL:0000738!3.17e-11!17;CL:0002087!3.17e-11!17;CL:0000988!4.45e-11!32;CL:0002032!4.45e-11!32;CL:0000037!4.45e-11!32;CL:0000566!4.45e-11!32;CL:0000837!4.45e-11!32;CL:0000815!4.39e-09!1;CL:0000792!4.39e-09!1;CL:0000625!7.41e-09!1;CL:0002320!1.48e-07!46;CL:0000134!1.48e-07!46|ontology_enrichment_celltype_v019_2=CL:0000791,3.75e-39,9;CL:0000789,3.75e-39,9;CL:0002420,3.75e-39,9;CL:0002419,3.75e-39,9;CL:0000790,3.75e-39,9;CL:0000084,3.07e-32,11;CL:0000827,3.07e-32,11;CL:0000838,1.21e-29,12;CL:0000542,1.91e-27,13;CL:0000051,1.91e-27,13;CL:0000624,2.39e-25,8;CL:0000815,3.06e-23,1;CL:0000792,3.06e-23,1;CL:0000625,1.39e-22,1;CL:0000738,3.13e-21,17;CL:0002087,3.13e-21,17;CL:0002031,9.61e-15,25;CL:0000988,1.03e-11,32;CL:0002032,1.03e-11,32;CL:0000037,1.03e-11,32;CL:0000837,1.03e-11,32;CL:0002320,2.15e-08,46;CL:0000134,2.15e-08,46;CL:0000219,2.91e-07,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!1.48e-07!46|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.15e-08,46|phase1_expression=0,0,0,0,0,0,0,5.93967287831251,0,0,0,0,0.856003649656029,1.13646523144697,0,0,0,0.157731082679119,0.274228867211478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45072428402269,1.00828139742739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136694227721025,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr2:112347135..112347141,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=29 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:112347135..112347141,+ | |||
|description=CAGE_peak_at_chr2:112347135..112347141,+ | |||
|id=chr2:112347135..112347141,+ | |||
|ontology_enrichment_celltype=CL:0000791!3.70e-21!9;CL:0000789!3.70e-21!9;CL:0002420!3.70e-21!9;CL:0002419!3.70e-21!9;CL:0000790!3.70e-21!9;CL:0000084!2.49e-17!11;CL:0000827!2.49e-17!11;CL:0000838!6.84e-16!12;CL:0000624!1.43e-15!8;CL:0000542!1.13e-14!13;CL:0000051!1.13e-14!13;CL:0002031!2.67e-14!25;CL:0000738!3.17e-11!17;CL:0002087!3.17e-11!17;CL:0000988!4.45e-11!32;CL:0002032!4.45e-11!32;CL:0000037!4.45e-11!32;CL:0000566!4.45e-11!32;CL:0000837!4.45e-11!32;CL:0000815!4.39e-09!1;CL:0000792!4.39e-09!1;CL:0000625!7.41e-09!1;CL:0002320!1.48e-07!46;CL:0000134!1.48e-07!46 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,3.75e-39,9;CL:0000789,3.75e-39,9;CL:0002420,3.75e-39,9;CL:0002419,3.75e-39,9;CL:0000790,3.75e-39,9;CL:0000084,3.07e-32,11;CL:0000827,3.07e-32,11;CL:0000838,1.21e-29,12;CL:0000542,1.91e-27,13;CL:0000051,1.91e-27,13;CL:0000624,2.39e-25,8;CL:0000815,3.06e-23,1;CL:0000792,3.06e-23,1;CL:0000625,1.39e-22,1;CL:0000738,3.13e-21,17;CL:0002087,3.13e-21,17;CL:0002031,9.61e-15,25;CL:0000988,1.03e-11,32;CL:0002032,1.03e-11,32;CL:0000037,1.03e-11,32;CL:0000837,1.03e-11,32;CL:0002320,2.15e-08,46;CL:0000134,2.15e-08,46;CL:0000219,2.91e-07,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!1.48e-07!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.15e-08,46 | |||
|phase1_expression=0,0,0,0,0,0,0,5.93967287831251,0,0,0,0,0.856003649656029,1.13646523144697,0,0,0,0.157731082679119,0.274228867211478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45072428402269,1.00828139742739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136694227721025,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr2:112347135..112347141,+ | |||
}} |
Latest revision as of 09:09, 6 August 2015
Short description: | p@chr2:112347135..112347141, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:112347135..112347141, + |
Coexpression cluster: | MCL_coexpression_mm9:29 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 3.75e-39 | 9 |
alpha-beta T cell | 3.75e-39 | 9 |
immature T cell | 3.75e-39 | 9 |
mature T cell | 3.75e-39 | 9 |
immature alpha-beta T cell | 3.75e-39 | 9 |
T cell | 3.07e-32 | 11 |
pro-T cell | 3.07e-32 | 11 |
lymphoid lineage restricted progenitor cell | 1.21e-29 | 12 |
lymphocyte | 1.91e-27 | 13 |
common lymphoid progenitor | 1.91e-27 | 13 |
CD4-positive, alpha-beta T cell | 2.39e-25 | 8 |
regulatory T cell | 3.06e-23 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 3.06e-23 | 1 |
CD8-positive, alpha-beta T cell | 1.39e-22 | 1 |
leukocyte | 3.13e-21 | 17 |
nongranular leukocyte | 3.13e-21 | 17 |
hematopoietic lineage restricted progenitor cell | 9.61e-15 | 25 |
hematopoietic cell | 1.03e-11 | 32 |
hematopoietic oligopotent progenitor cell | 1.03e-11 | 32 |
hematopoietic stem cell | 1.03e-11 | 32 |
hematopoietic multipotent progenitor cell | 1.03e-11 | 32 |
connective tissue cell | 2.15e-08 | 46 |
mesenchymal cell | 2.15e-08 | 46 |
motile cell | 2.91e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.15e-08 | 46 |