FFCP PHASE1:Mm9::chr2:112105891..112105917,+: Difference between revisions
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{{FFCP|EntrezGene=107723|HGNC=|MCL_coexpression_id=177|UniProt=Q3V0N8|association_with_transcript=-64bp_to_ENSMUST00000110991_5end|description=CAGE_peak_5_at_Slc12a6_5end|id=chr2:112105891..112105917,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003081!2.11e-10!88;UBERON:0002371!2.81e-08!16;UBERON:0001474!3.14e-08!22;UBERON:0004765!3.14e-08!22;UBERON:0001434!3.14e-08!22;UBERON:0002204!3.88e-08!32;UBERON:0002390!7.56e-08!45;UBERON:0003061!7.56e-08!45;UBERON:0002193!1.10e-07!48|ontology_enrichment_uberon_v019_2=UBERON:0003081,3.41e-10,87;UBERON:0002371,2.07e-08,16;UBERON:0001474,3.06e-08,22;UBERON:0004765,3.06e-08,22;UBERON:0001434,3.06e-08,22;UBERON:0002204,3.57e-08,32;UBERON:0002390,5.02e-08,45;UBERON:0003061,5.02e-08,45;UBERON:0000926,5.93e-08,120;UBERON:0004120,5.93e-08,120;UBERON:0006603,5.93e-08,120;UBERON:0002193,6.83e-08,48;UBERON:0002405,6.83e-08,48|phase1_expression=0.80074423552397,0.348975407639361,0,1.20985684522732,2.00358291978539,0.16787927191189,0.934450562382103,10.8463591690924,0.84473233291,0.936258105287974,0.513653904676515,0.558405112967355,10.2720437958723,9.70366466850871,4.99664642723494,5.4668322195253,2.09868563438444,17.0349569293448,16.8650753335059,25.0389894560838,3.14660173558958,2.97872853602656,3.91799683708403,1.91990907352088,0.45881856213434,0.57423196411502,1.7230479846363,0.861884930743556,0.190023419456374,0.252030129759931,0.443461021310609,0.635030673459631,0,0,0,0.498703936075477,0.408338712524738,30.9713406745312,17.1893775795236,17.7998072951091,30.5880373776127,43.7149110373405,27.1885797697446,0.629484089877886,0.709638518536602,0.367093504323363,0,1.96222640742402,2.19686182734472,2.72201858703997,1.39986421625363,1.43752564364972,16.1071301815427,13.0565185562042,7.73015738027667,3.08711323243136,1.43266719969378,5.15672092277442,0.404632921719196,1.05798195854407,0,0.338844532069132,0.889294796111139,7.19919773825119,9.88866362566974,2.1314403448383,3.29560121570245,3.07374644257244,0.725827286159344,0.945041568321835,1.05162480675691,1.99955689082663,0.662605622854841,0.122490799214954,0.766763768145891,1.83843757322004,3.30347642998166,3.44755812830007,2.15049146558741,0.263772575460388,0.457438218012048,0.52091337055676,3.90856198601933,2.8138130501584,1.5279824777681,2.65165726926301,1.70846016958924,0.931997229126503,0.832988126665025,1.51143120213571,11.0148505706638,3.44169550792555,0,1.07940638327563,1.94932925234301,1.34408066129201,3.08977724289854,1.02258193546835,1.03914401841148,1.06001872353102,1.26759077799012,1.28326477414318,0,0,1.08245520505607,0.760079596425296,1.51657333504435,1.48439043634778,10.616453229534,3.85949561568544,0.693941307064543,0.608930956624282,1.38369298353635,1.95939432718409,1.76383060703557,2.01066546127481,1.73036477414062,2.74738778147832,7.07688441559899,3.07357014900077,5.07935492458905,2.90925151881133,1.86391761218122,3.51336956413857,4.39838084308256,1.27728527604296,3.95389910869537,4.19931911695385,4.3203877204842,2.24685959107234,3.20250421973039,1.38219787324151,1.04294592115366,2.55715457330331,2.0778804455956,3.24482526135515,2.03678727700633,4.97627882440372,1.76905930903572,1.47309299120532,1.43132487258974,1.14951052216736,1.26043490863744,2.41127708537144,1.49680298132921,1.2811372028485,1.49922759295566,4.13925393182425,0.215567992932842,0.567318240503458,0.351902248327898,0.876782929710299,2.50242524303038,1.0447564995665,2.67516777330327,1.19420560091096,6.31991868581911,6.43369767786788,4.54661599032948,0.621377317606506,2.34526059981096,2.52086886045421,3.31442629819294,2.75469924446365,2.1597395804233,2.79040733700489,4.29237442239391,2.45207218971056,2.63295759861569,3.94001913789829,3.97237166774693,2.77779976108131,4.83010253640311,6.30770168173747,2.73376933133365,1.02904612379284,0.330418782983798,0.793351699990633,0.426576501070468,0.928946687441754,1.15980715189884,1.4117846723634,0.889512175379481,0.190225626112559,0,0.658795818896044,0.502670417600539,0.795825888164603,1.36474860983384,1.79763881730844,1.94524244887225,0.796565093017469,0.758671603812327,0.456994050438915,2.25415471346161,0.407302655690628,1.16371492300575,1.47285221769669,2.65593455921881,2.36176236767363,2.82597710114475,1.85095745882701,2.07516838961004,1.00107063429656,0.982794975566015,1.12431056192427,0.405720242777006,2.17059443777175,1.52775511068852,2.01387296215567,2.59416362840057,1.64736847912849,2.87536413054709,2.23284568601102,1.87222603868736,2.02063102357689,1.79397413521912,0.964887042726734,5.72734889516475,0.757965647081939,0.814824882210129,0.169745085775188,2.11221223459652,1.34005005953453,2.14239276797412,1.75620283072019,2.67979744980525,2.6575762757853,1.91345722388985,5.40748938561935,3.28101465545202,6.219909519005,13.5712155545345,5.4390568381871,0.491764273019036,1.93155722413313,2.56880943980467,1.75817529888305,0.983609672260053,3.02965112645248,2.2085575359138,0.78087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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:107723 | |||
|HGNC= | |||
|MCL_coexpression_id=177 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q3V0N8 | |||
|association_with_transcript=-64bp_to_ENSMUST00000110991_5end | |||
|cluster_id=chr2:112105891..112105917,+ | |||
|description=CAGE_peak_5_at_Slc12a6_5end | |||
|id=chr2:112105891..112105917,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!2.11e-10!88;UBERON:0002371!2.81e-08!16;UBERON:0001474!3.14e-08!22;UBERON:0004765!3.14e-08!22;UBERON:0001434!3.14e-08!22;UBERON:0002204!3.88e-08!32;UBERON:0002390!7.56e-08!45;UBERON:0003061!7.56e-08!45;UBERON:0002193!1.10e-07!48 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,3.41e-10,87;UBERON:0002371,2.07e-08,16;UBERON:0001474,3.06e-08,22;UBERON:0004765,3.06e-08,22;UBERON:0001434,3.06e-08,22;UBERON:0002204,3.57e-08,32;UBERON:0002390,5.02e-08,45;UBERON:0003061,5.02e-08,45;UBERON:0000926,5.93e-08,120;UBERON:0004120,5.93e-08,120;UBERON:0006603,5.93e-08,120;UBERON:0002193,6.83e-08,48;UBERON:0002405,6.83e-08,48 | |||
|phase1_expression=0.80074423552397,0.348975407639361,0,1.20985684522732,2.00358291978539,0.16787927191189,0.934450562382103,10.8463591690924,0.84473233291,0.936258105287974,0.513653904676515,0.558405112967355,10.2720437958723,9.70366466850871,4.99664642723494,5.4668322195253,2.09868563438444,17.0349569293448,16.8650753335059,25.0389894560838,3.14660173558958,2.97872853602656,3.91799683708403,1.91990907352088,0.45881856213434,0.57423196411502,1.7230479846363,0.861884930743556,0.190023419456374,0.252030129759931,0.443461021310609,0.635030673459631,0,0,0,0.498703936075477,0.408338712524738,30.9713406745312,17.1893775795236,17.7998072951091,30.5880373776127,43.7149110373405,27.1885797697446,0.629484089877886,0.709638518536602,0.367093504323363,0,1.96222640742402,2.19686182734472,2.72201858703997,1.39986421625363,1.43752564364972,16.1071301815427,13.0565185562042,7.73015738027667,3.08711323243136,1.43266719969378,5.15672092277442,0.404632921719196,1.05798195854407,0,0.338844532069132,0.889294796111139,7.19919773825119,9.88866362566974,2.1314403448383,3.29560121570245,3.07374644257244,0.725827286159344,0.945041568321835,1.05162480675691,1.99955689082663,0.662605622854841,0.122490799214954,0.766763768145891,1.83843757322004,3.30347642998166,3.44755812830007,2.15049146558741,0.263772575460388,0.457438218012048,0.52091337055676,3.90856198601933,2.8138130501584,1.5279824777681,2.65165726926301,1.70846016958924,0.931997229126503,0.832988126665025,1.51143120213571,11.0148505706638,3.44169550792555,0,1.07940638327563,1.94932925234301,1.34408066129201,3.08977724289854,1.02258193546835,1.03914401841148,1.06001872353102,1.26759077799012,1.28326477414318,0,0,1.08245520505607,0.760079596425296,1.51657333504435,1.48439043634778,10.616453229534,3.85949561568544,0.693941307064543,0.608930956624282,1.38369298353635,1.95939432718409,1.76383060703557,2.01066546127481,1.73036477414062,2.74738778147832,7.07688441559899,3.07357014900077,5.07935492458905,2.90925151881133,1.86391761218122,3.51336956413857,4.39838084308256,1.27728527604296,3.95389910869537,4.19931911695385,4.3203877204842,2.24685959107234,3.20250421973039,1.38219787324151,1.04294592115366,2.55715457330331,2.0778804455956,3.24482526135515,2.03678727700633,4.97627882440372,1.76905930903572,1.47309299120532,1.43132487258974,1.14951052216736,1.26043490863744,2.41127708537144,1.49680298132921,1.2811372028485,1.49922759295566,4.13925393182425,0.215567992932842,0.567318240503458,0.351902248327898,0.876782929710299,2.50242524303038,1.0447564995665,2.67516777330327,1.19420560091096,6.31991868581911,6.43369767786788,4.54661599032948,0.621377317606506,2.34526059981096,2.52086886045421,3.31442629819294,2.75469924446365,2.1597395804233,2.79040733700489,4.29237442239391,2.45207218971056,2.63295759861569,3.94001913789829,3.97237166774693,2.77779976108131,4.83010253640311,6.30770168173747,2.73376933133365,1.02904612379284,0.330418782983798,0.793351699990633,0.426576501070468,0.928946687441754,1.15980715189884,1.4117846723634,0.889512175379481,0.190225626112559,0,0.658795818896044,0.502670417600539,0.795825888164603,1.36474860983384,1.79763881730844,1.94524244887225,0.796565093017469,0.758671603812327,0.456994050438915,2.25415471346161,0.407302655690628,1.16371492300575,1.47285221769669,2.65593455921881,2.36176236767363,2.82597710114475,1.85095745882701,2.07516838961004,1.00107063429656,0.982794975566015,1.12431056192427,0.405720242777006,2.17059443777175,1.52775511068852,2.01387296215567,2.59416362840057,1.64736847912849,2.87536413054709,2.23284568601102,1.87222603868736,2.02063102357689,1.79397413521912,0.964887042726734,5.72734889516475,0.757965647081939,0.814824882210129,0.169745085775188,2.11221223459652,1.34005005953453,2.14239276797412,1.75620283072019,2.67979744980525,2.6575762757853,1.91345722388985,5.40748938561935,3.28101465545202,6.219909519005,13.5712155545345,5.4390568381871,0.491764273019036,1.93155722413313,2.56880943980467,1.75817529888305,0.983609672260053,3.02965112645248,2.2085575359138,0.780877488593277,2.58508077279359,1.91175038362042,4.67877215573028,3.67999490025482,1.61924280669958,2.04579100537918,2.76701444562566,2.24924921495265,2.41298144854057,1.06839362200353,0.488660878060728,2.63952196756057,6.63725691699814,0,0.302323556964751,0.943025398779491,0.885905678642318,1.53717573971964,1.29214146584111,1.09060118843252,0.356497378384721,1.26414703174326,0,4.12542172992747,2.38307724027652,0.900305470156551,1.94038025674132,1.71469628025274,1.24138163549592,0.713475270408282,1.31639216481697,1.2178597964584,1.17335854031855,1.0591603543191,0.882113592219848,1.15420377059036,1.61464426695906,0.844380948994182,0.477489376012546,0.984845398470368,0.874442509889552,2.59595422814714,7.17657699350981,2.27025554759545,3.51869602002452,4.1441060541032,4.51090951479383,6.17701067657611,8.32894306969891,5.318155188299,6.90999869022119,0,1.26534397432454,0.609958401380546,0.972048067396211,0.836353184057875,1.31017538247707,1.61837215661785,1.57041565878138,1.0470237679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| |||
|short_description=p5@Slc12a6 | |||
}} |
Revision as of 08:58, 6 August 2015
Short description: | p5@Slc12a6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Slc12a6_5end |
Coexpression cluster: | MCL_coexpression_mm9:177 |
Association with transcript: | -64bp_to_ENSMUST00000110991_5end |
EntrezGene: | 107723 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 3.41e-10 | 87 |
bone marrow | 2.07e-08 | 16 |
bone element | 3.06e-08 | 22 |
skeletal element | 3.06e-08 | 22 |
skeletal system | 3.06e-08 | 22 |
musculoskeletal system | 3.57e-08 | 32 |
hematopoietic system | 5.02e-08 | 45 |
blood island | 5.02e-08 | 45 |
mesoderm | 5.93e-08 | 120 |
mesoderm-derived structure | 5.93e-08 | 120 |
presumptive mesoderm | 5.93e-08 | 120 |
hemolymphoid system | 6.83e-08 | 48 |
immune system | 6.83e-08 | 48 |