FFCP PHASE1:Mm9::chr3:27588597..27588602,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr3:27588597..27588602,+|id=chr3:27588597..27588602,+|ontology_enrichment_celltype=CL:0000355!1.74e-10!9;CL:0000049!4.97e-09!19|ontology_enrichment_celltype_v019_2=CL:0000213,5.62e-10,1;CL:0002078,5.62e-10,1;CL:0000115,5.62e-10,1;CL:0002262,5.62e-10,1;CL:1000398,5.62e-10,1;CL:0000355,1.91e-09,9|ontology_enrichment_disease=DOID:0060100!1.05e-12!3;DOID:4045!1.05e-12!3|ontology_enrichment_disease_v019_2=DOID:0060100,5.70e-27,3;DOID:4045,5.70e-27,3;DOID:0050686,7.46e-14,6|ontology_enrichment_uberon=UBERON:0001134!1.74e-10!9;UBERON:0002036!1.74e-10!9;UBERON:0002385!1.74e-10!9;UBERON:0000486!1.74e-10!9;UBERON:0001015!1.74e-10!9;UBERON:0004290!1.74e-10!9;UBERON:0003082!1.74e-10!9;UBERON:0000383!2.06e-09!10;UBERON:0002329!1.56e-08!11;UBERON:0003077!1.56e-08!11;UBERON:0003059!1.56e-08!11;UBERON:0007282!1.56e-08!11;UBERON:0009618!1.56e-08!11;UBERON:0007285!1.56e-08!11;UBERON:0002204!2.65e-08!32;UBERON:0000055!3.74e-07!5;UBERON:0001981!3.74e-07!5;UBERON:0002049!3.74e-07!5;UBERON:0007500!3.74e-07!5;UBERON:0007798!3.74e-07!5;UBERON:0004537!3.74e-07!5;UBERON:0006965!3.74e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0002394,5.62e-10,1;UBERON:0001281,5.62e-10,1;UBERON:0000353,5.62e-10,1;UBERON:0003497,5.62e-10,1;UBERON:0003909,5.62e-10,1;UBERON:0003928,5.62e-10,1;UBERON:0003835,5.62e-10,1;UBERON:0003513,5.62e-10,1;UBERON:0001280,5.62e-10,1;UBERON:0004647,5.62e-10,1;UBERON:0002294,5.62e-10,1;UBERON:0001173,5.62e-10,1;UBERON:0004912,5.62e-10,1;UBERON:0005171,5.62e-10,1;UBERON:0001134,1.91e-09,9;UBERON:0002036,1.91e-09,9;UBERON:0002385,1.91e-09,9;UBERON:0000486,1.91e-09,9;UBERON:0007503,1.91e-09,9;UBERON:0001015,1.91e-09,9;UBERON:0002329,1.91e-09,9;UBERON:0003082,1.91e-09,9;UBERON:0003059,1.91e-09,9;UBERON:0007282,1.91e-09,9;UBERON:0004290,1.91e-09,9;UBERON:0009618,1.91e-09,9;UBERON:0000383,1.47e-08,10;UBERON:0007524,7.85e-08,11;UBERON:0003077,7.85e-08,11;UBERON:0007285,7.85e-08,11;UBERON:0002204,6.89e-07,32|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42438965179803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.76678467663217,3.1253413780952,1.0470474879476,16.4704816648684,3.41522742479223,2.42755176515577,0.251793635951155,0.202753862439029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73918693221007,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.479260498023681,2.39961092397363,0.254140454146129,0,0,0,0,0,0,0,0,0,0,0,0.130120442962704,0,0,0,0,0,0,0,0,0,0,0,0.278047249225598,0,0,0,0.702213187313235,1.28673953557358,1.13665399758237,0,0,0.36012412292203,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr3:27588597..27588602,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr3:27588597..27588602,+ | |||
|description=CAGE_peak_at_chr3:27588597..27588602,+ | |||
|id=chr3:27588597..27588602,+ | |||
|ontology_enrichment_celltype=CL:0000355!1.74e-10!9;CL:0000049!4.97e-09!19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000213,5.62e-10,1;CL:0002078,5.62e-10,1;CL:0000115,5.62e-10,1;CL:0002262,5.62e-10,1;CL:1000398,5.62e-10,1;CL:0000355,1.91e-09,9 | |||
|ontology_enrichment_disease=DOID:0060100!1.05e-12!3;DOID:4045!1.05e-12!3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,5.70e-27,3;DOID:4045,5.70e-27,3;DOID:0050686,7.46e-14,6 | |||
|ontology_enrichment_uberon=UBERON:0001134!1.74e-10!9;UBERON:0002036!1.74e-10!9;UBERON:0002385!1.74e-10!9;UBERON:0000486!1.74e-10!9;UBERON:0001015!1.74e-10!9;UBERON:0004290!1.74e-10!9;UBERON:0003082!1.74e-10!9;UBERON:0000383!2.06e-09!10;UBERON:0002329!1.56e-08!11;UBERON:0003077!1.56e-08!11;UBERON:0003059!1.56e-08!11;UBERON:0007282!1.56e-08!11;UBERON:0009618!1.56e-08!11;UBERON:0007285!1.56e-08!11;UBERON:0002204!2.65e-08!32;UBERON:0000055!3.74e-07!5;UBERON:0001981!3.74e-07!5;UBERON:0002049!3.74e-07!5;UBERON:0007500!3.74e-07!5;UBERON:0007798!3.74e-07!5;UBERON:0004537!3.74e-07!5;UBERON:0006965!3.74e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,5.62e-10,1;UBERON:0001281,5.62e-10,1;UBERON:0000353,5.62e-10,1;UBERON:0003497,5.62e-10,1;UBERON:0003909,5.62e-10,1;UBERON:0003928,5.62e-10,1;UBERON:0003835,5.62e-10,1;UBERON:0003513,5.62e-10,1;UBERON:0001280,5.62e-10,1;UBERON:0004647,5.62e-10,1;UBERON:0002294,5.62e-10,1;UBERON:0001173,5.62e-10,1;UBERON:0004912,5.62e-10,1;UBERON:0005171,5.62e-10,1;UBERON:0001134,1.91e-09,9;UBERON:0002036,1.91e-09,9;UBERON:0002385,1.91e-09,9;UBERON:0000486,1.91e-09,9;UBERON:0007503,1.91e-09,9;UBERON:0001015,1.91e-09,9;UBERON:0002329,1.91e-09,9;UBERON:0003082,1.91e-09,9;UBERON:0003059,1.91e-09,9;UBERON:0007282,1.91e-09,9;UBERON:0004290,1.91e-09,9;UBERON:0009618,1.91e-09,9;UBERON:0000383,1.47e-08,10;UBERON:0007524,7.85e-08,11;UBERON:0003077,7.85e-08,11;UBERON:0007285,7.85e-08,11;UBERON:0002204,6.89e-07,32 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42438965179803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.76678467663217,3.1253413780952,1.0470474879476,16.4704816648684,3.41522742479223,2.42755176515577,0.251793635951155,0.202753862439029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73918693221007,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.479260498023681,2.39961092397363,0.254140454146129,0,0,0,0,0,0,0,0,0,0,0,0.130120442962704,0,0,0,0,0,0,0,0,0,0,0,0.278047249225598,0,0,0,0.702213187313235,1.28673953557358,1.13665399758237,0,0,0.36012412292203,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr3:27588597..27588602,+ | |||
}} |
Latest revision as of 08:28, 6 August 2015
Short description: | p@chr3:27588597..27588602, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:27588597..27588602, + |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lining cell | 5.62e-10 | 1 |
meso-epithelial cell | 5.62e-10 | 1 |
endothelial cell | 5.62e-10 | 1 |
endothelial cell of sinusoid | 5.62e-10 | 1 |
endothelial cell of hepatic sinusoid | 5.62e-10 | 1 |
multi-potent skeletal muscle stem cell | 1.91e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
bile duct | 5.62e-10 | 1 |
hepatic sinusoid | 5.62e-10 | 1 |
parenchyma | 5.62e-10 | 1 |
abdomen blood vessel | 5.62e-10 | 1 |
sinusoid | 5.62e-10 | 1 |
digestive system duct | 5.62e-10 | 1 |
abdominal segment blood vessel | 5.62e-10 | 1 |
trunk blood vessel | 5.62e-10 | 1 |
liver parenchyma | 5.62e-10 | 1 |
liver lobule | 5.62e-10 | 1 |
biliary system | 5.62e-10 | 1 |
biliary tree | 5.62e-10 | 1 |
biliary bud | 5.62e-10 | 1 |
hepatic duct | 5.62e-10 | 1 |
skeletal muscle tissue | 1.91e-09 | 9 |
striated muscle tissue | 1.91e-09 | 9 |
muscle tissue | 1.91e-09 | 9 |
multilaminar epithelium | 1.91e-09 | 9 |
epithelial vesicle | 1.91e-09 | 9 |
musculature | 1.91e-09 | 9 |
somite | 1.91e-09 | 9 |
myotome | 1.91e-09 | 9 |
presomitic mesoderm | 1.91e-09 | 9 |
presumptive segmental plate | 1.91e-09 | 9 |
dermomyotome | 1.91e-09 | 9 |
trunk paraxial mesoderm | 1.91e-09 | 9 |
musculature of body | 1.47e-08 | 10 |
dense mesenchyme tissue | 7.85e-08 | 11 |
paraxial mesoderm | 7.85e-08 | 11 |
presumptive paraxial mesoderm | 7.85e-08 | 11 |
musculoskeletal system | 6.89e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 5.70e-27 | 3 |
muscle cancer | 5.70e-27 | 3 |
organ system cancer | 7.46e-14 | 6 |