FFCP PHASE1:Mm9::chr5:125956196..125956230,+: Difference between revisions
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{{FFCP|EntrezGene=78894|HGNC=|MCL_coexpression_id=28|UniProt=Q9D2R0|association_with_transcript=12bp_to_,-12bp_to_ENSMUST00000031445,NM_030210,uc008zrs.1_5end|description=CAGE_peak_2_at_Aacs_5end|id=chr5:125956196..125956230,+|ontology_enrichment_celltype=CL:0000055!2.47e-14!50;CL:0002321!5.15e-14!70;CL:0000220!5.15e-14!70;CL:0002319!5.67e-12!43;CL:0000221!1.10e-11!44;CL:0000133!1.10e-11!44;CL:0002371!3.48e-11!118;CL:0000548!7.74e-10!115;CL:0000004!7.74e-10!115;CL:0000255!7.74e-10!115;CL:0000144!1.21e-09!121;CL:0000012!1.21e-09!121;CL:0000117!2.41e-09!23;CL:0000337!2.41e-09!23;CL:0000393!2.69e-09!39;CL:0000211!2.69e-09!39;CL:0000723!1.38e-08!91;CL:0000048!1.38e-08!91;CL:0000540!1.12e-07!33;CL:0000047!1.12e-07!33;CL:0000031!1.12e-07!33;CL:0000404!1.12e-07!33|ontology_enrichment_celltype_v019_2=CL:0002321,4.89e-14,70;CL:0002319,5.65e-12,43;CL:0000221,1.10e-11,44;CL:0000133,1.10e-11,44;CL:0000117,2.41e-09,23;CL:0000337,2.41e-09,23;CL:0000393,2.68e-09,39;CL:0000211,2.68e-09,39;CL:0000723,1.41e-08,91;CL:0000048,1.41e-08,91;CL:0000540,1.12e-07,33;CL:0000047,1.12e-07,33;CL:0000031,1.12e-07,33;CL:0000404,1.12e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.49e-14!75;UBERON:0001016!1.49e-14!75;UBERON:0004121!2.41e-14!102;UBERON:0000924!2.41e-14!102;UBERON:0006601!2.41e-14!102;UBERON:0001017!6.07e-14!73;UBERON:0005743!6.07e-14!73;UBERON:0002020!1.46e-11!34;UBERON:0001049!1.66e-11!52;UBERON:0005068!1.66e-11!52;UBERON:0006241!1.66e-11!52;UBERON:0007135!1.66e-11!52;UBERON:0002346!4.06e-11!71;UBERON:0003075!4.06e-11!71;UBERON:0007284!4.06e-11!71;UBERON:0002616!1.02e-09!49;UBERON:0000955!2.85e-09!50;UBERON:0006238!2.85e-09!50;UBERON:0002791!7.02e-09!29;UBERON:0003528!7.02e-09!29;UBERON:0001893!7.02e-09!29;UBERON:0002780!4.66e-08!39;UBERON:0001890!4.66e-08!39;UBERON:0006240!4.66e-08!39;UBERON:0003056!5.31e-08!49;UBERON:0000033!5.33e-08!63;UBERON:0003080!5.86e-08!40;UBERON:0000956!4.38e-07!21;UBERON:0001869!4.38e-07!21;UBERON:0000203!4.38e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.48e-14,75;UBERON:0004121,3.26e-14,95;UBERON:0000924,3.26e-14,95;UBERON:0006601,3.26e-14,95;UBERON:0001017,6.06e-14,73;UBERON:0000073,3.06e-12,54;UBERON:0010371,1.43e-11,73;UBERON:0002020,1.45e-11,34;UBERON:0001049,1.66e-11,52;UBERON:0005068,1.66e-11,52;UBERON:0006241,1.66e-11,52;UBERON:0007135,1.66e-11,52;UBERON:0002346,3.60e-11,64;UBERON:0003075,3.60e-11,64;UBERON:0007284,3.60e-11,64;UBERON:0002616,5.52e-09,46;UBERON:0003528,7.00e-09,29;UBERON:0002791,7.00e-09,29;UBERON:0001893,7.00e-09,29;UBERON:0000955,1.52e-08,47;UBERON:0006238,1.52e-08,47;UBERON:0002780,4.65e-08,39;UBERON:0001890,4.65e-08,39;UBERON:0006240,4.65e-08,39;UBERON:0003056,5.30e-08,49;UBERON:0003080,5.85e-08,40;UBERON:0000956,4.38e-07,21;UBERON:0001869,4.38e-07,21;UBERON:0000203,4.38e-07,21|phase1_expression=3.52327463630547,2.79180326111489,3.63999391511629,1.81478526784098,0.500895729946347,5.20425742926858,6.07392865548367,2.96983643915625,7.46180227403834,4.21316147379588,3.25314139628459,3.58974715479014,1.54080656938085,1.92324885321794,2.6648780945253,3.44207954562704,4.89693314689703,5.36285681109004,4.2505474417779,3.81950686618227,3.31668831589172,4.56738375524072,6.79119451761232,4.7997726838022,3.89995777814189,3.44539178469012,3.87685796543167,3.01659725760245,6.08074942260396,4.03248207615889,4.43461021310609,5.08024538767705,5.53558308826113,15.8481681015439,1.1554064790051,3.65716219788683,1.22501613757421,14.2300754450549,9.37602413428561,15.1821885752402,14.7057872007754,13.6609096991689,15.0508209439658,6.54663453473002,5.5757312170733,5.32285581268876,10.1710874765245,11.3373081317832,9.22681967484782,6.9994763666742,9.51907667052465,8.62515386189829,4.19456515144341,1.45072428402269,2.35265659399725,6.68874533693462,4.58453503902011,6.18806510732931,7.28339259094552,7.40587370980846,5.70448263155561,12.5372476865579,8.00365316500025,5.84934816232909,9.88866362566974,5.6838409195688,8.68840320503374,8.4528027170742,4.87341177849845,6.75029691658453,6.09942387919008,10.2834354385369,11.9269012113871,4.77714116938321,5.07980996396653,9.19218786610021,7.70811166995721,4.34136949489638,5.68344173048101,10.0233578674947,10.1551284398675,5.2091337055676,7.53794097303729,5.06486349028512,5.34793867218835,8.54422897873636,10.2507610175354,10.6247684120421,6.73963120665338,5.06329452715463,3.18850937571846,13.7667820317022,5.439770669662,9.17495425784289,18.1937396885347,8.51251085484938,6.88177658645584,2.21559419351475,3.89679006904303,2.12003744706204,3.38024207464033,12.8326477414318,5.09610479413291,7.11066703153331,8.44315059943735,7.60079596425296,8.08839112023653,2.16949371466214,1.8125651855302,4.60170631100957,5.20455980298408,3.95805121805784,3.68984795609694,2.71300752994721,2.23418543557839,13.3206586809456,3.95511948374998,10.2665543413137,4.42305275974937,3.07357014900077,2.87093973998512,1.45462575940567,3.72783522436244,2.63502717310392,5.02672096352292,2.55457055208591,0.9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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:78894 | |||
|HGNC= | |||
|MCL_coexpression_id=28 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9D2R0 | |||
|association_with_transcript=12bp_to_,-12bp_to_ENSMUST00000031445,NM_030210,uc008zrs.1_5end | |||
|cluster_id=chr5:125956196..125956230,+ | |||
|description=CAGE_peak_2_at_Aacs_5end | |||
|id=chr5:125956196..125956230,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.47e-14!50;CL:0002321!5.15e-14!70;CL:0000220!5.15e-14!70;CL:0002319!5.67e-12!43;CL:0000221!1.10e-11!44;CL:0000133!1.10e-11!44;CL:0002371!3.48e-11!118;CL:0000548!7.74e-10!115;CL:0000004!7.74e-10!115;CL:0000255!7.74e-10!115;CL:0000144!1.21e-09!121;CL:0000012!1.21e-09!121;CL:0000117!2.41e-09!23;CL:0000337!2.41e-09!23;CL:0000393!2.69e-09!39;CL:0000211!2.69e-09!39;CL:0000723!1.38e-08!91;CL:0000048!1.38e-08!91;CL:0000540!1.12e-07!33;CL:0000047!1.12e-07!33;CL:0000031!1.12e-07!33;CL:0000404!1.12e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,4.89e-14,70;CL:0002319,5.65e-12,43;CL:0000221,1.10e-11,44;CL:0000133,1.10e-11,44;CL:0000117,2.41e-09,23;CL:0000337,2.41e-09,23;CL:0000393,2.68e-09,39;CL:0000211,2.68e-09,39;CL:0000723,1.41e-08,91;CL:0000048,1.41e-08,91;CL:0000540,1.12e-07,33;CL:0000047,1.12e-07,33;CL:0000031,1.12e-07,33;CL:0000404,1.12e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.49e-14!75;UBERON:0001016!1.49e-14!75;UBERON:0004121!2.41e-14!102;UBERON:0000924!2.41e-14!102;UBERON:0006601!2.41e-14!102;UBERON:0001017!6.07e-14!73;UBERON:0005743!6.07e-14!73;UBERON:0002020!1.46e-11!34;UBERON:0001049!1.66e-11!52;UBERON:0005068!1.66e-11!52;UBERON:0006241!1.66e-11!52;UBERON:0007135!1.66e-11!52;UBERON:0002346!4.06e-11!71;UBERON:0003075!4.06e-11!71;UBERON:0007284!4.06e-11!71;UBERON:0002616!1.02e-09!49;UBERON:0000955!2.85e-09!50;UBERON:0006238!2.85e-09!50;UBERON:0002791!7.02e-09!29;UBERON:0003528!7.02e-09!29;UBERON:0001893!7.02e-09!29;UBERON:0002780!4.66e-08!39;UBERON:0001890!4.66e-08!39;UBERON:0006240!4.66e-08!39;UBERON:0003056!5.31e-08!49;UBERON:0000033!5.33e-08!63;UBERON:0003080!5.86e-08!40;UBERON:0000956!4.38e-07!21;UBERON:0001869!4.38e-07!21;UBERON:0000203!4.38e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.48e-14,75;UBERON:0004121,3.26e-14,95;UBERON:0000924,3.26e-14,95;UBERON:0006601,3.26e-14,95;UBERON:0001017,6.06e-14,73;UBERON:0000073,3.06e-12,54;UBERON:0010371,1.43e-11,73;UBERON:0002020,1.45e-11,34;UBERON:0001049,1.66e-11,52;UBERON:0005068,1.66e-11,52;UBERON:0006241,1.66e-11,52;UBERON:0007135,1.66e-11,52;UBERON:0002346,3.60e-11,64;UBERON:0003075,3.60e-11,64;UBERON:0007284,3.60e-11,64;UBERON:0002616,5.52e-09,46;UBERON:0003528,7.00e-09,29;UBERON:0002791,7.00e-09,29;UBERON:0001893,7.00e-09,29;UBERON:0000955,1.52e-08,47;UBERON:0006238,1.52e-08,47;UBERON:0002780,4.65e-08,39;UBERON:0001890,4.65e-08,39;UBERON:0006240,4.65e-08,39;UBERON:0003056,5.30e-08,49;UBERON:0003080,5.85e-08,40;UBERON:0000956,4.38e-07,21;UBERON:0001869,4.38e-07,21;UBERON:0000203,4.38e-07,21 | |||
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| |||
|short_description=p2@Aacs | |||
}} |
Revision as of 08:16, 6 August 2015
Short description: | p2@Aacs |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Aacs_5end |
Coexpression cluster: | MCL_coexpression_mm9:28 |
Association with transcript: | 12bp_to_, -12bp_to_ENSMUST00000031445, NM_030210, uc008zrs.1_5end |
EntrezGene: | 78894 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 4.89e-14 | 70 |
neural cell | 5.65e-12 | 43 |
ectodermal cell | 1.10e-11 | 44 |
neurectodermal cell | 1.10e-11 | 44 |
CNS neuron (sensu Vertebrata) | 2.41e-09 | 23 |
neuroblast (sensu Vertebrata) | 2.41e-09 | 23 |
electrically responsive cell | 2.68e-09 | 39 |
electrically active cell | 2.68e-09 | 39 |
somatic stem cell | 1.41e-08 | 91 |
multi fate stem cell | 1.41e-08 | 91 |
neuron | 1.12e-07 | 33 |
neuronal stem cell | 1.12e-07 | 33 |
neuroblast | 1.12e-07 | 33 |
electrically signaling cell | 1.12e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
nervous system | 1.48e-14 | 75 |
ectoderm-derived structure | 3.26e-14 | 95 |
ectoderm | 3.26e-14 | 95 |
presumptive ectoderm | 3.26e-14 | 95 |
central nervous system | 6.06e-14 | 73 |
regional part of nervous system | 3.06e-12 | 54 |
ecto-epithelium | 1.43e-11 | 73 |
gray matter | 1.45e-11 | 34 |
neural tube | 1.66e-11 | 52 |
neural rod | 1.66e-11 | 52 |
future spinal cord | 1.66e-11 | 52 |
neural keel | 1.66e-11 | 52 |
neurectoderm | 3.60e-11 | 64 |
neural plate | 3.60e-11 | 64 |
presumptive neural plate | 3.60e-11 | 64 |
regional part of brain | 5.52e-09 | 46 |
brain grey matter | 7.00e-09 | 29 |
regional part of telencephalon | 7.00e-09 | 29 |
telencephalon | 7.00e-09 | 29 |
brain | 1.52e-08 | 47 |
future brain | 1.52e-08 | 47 |
regional part of forebrain | 4.65e-08 | 39 |
forebrain | 4.65e-08 | 39 |
future forebrain | 4.65e-08 | 39 |
pre-chordal neural plate | 5.30e-08 | 49 |
anterior neural tube | 5.85e-08 | 40 |
cerebral cortex | 4.38e-07 | 21 |
cerebral hemisphere | 4.38e-07 | 21 |
pallium | 4.38e-07 | 21 |