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FFCP PHASE1:Mm9::chr6:92431636..92431640,-: Difference between revisions

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{{FFCP|EntrezGene=243548|HGNC=|UniProt=Q80Y24,A7YQ68|association_with_transcript=-250bp_to_ENSMUST00000113445,NM_001134460,uc009cyx.2_5end|description=CAGE_peak_9_at_Prickle2_5end|id=chr6:92431636..92431640,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002021!1.63e-08!10;UBERON:0000411!1.63e-08!10;UBERON:0001950!1.63e-08!10;UBERON:0000025!6.40e-08!114;UBERON:0002020!7.45e-08!34;UBERON:0004111!8.06e-08!122;UBERON:0001049!8.75e-08!52;UBERON:0005068!8.75e-08!52;UBERON:0006241!8.75e-08!52;UBERON:0007135!8.75e-08!52;UBERON:0001017!1.97e-07!73;UBERON:0005743!1.97e-07!73;UBERON:0000955!3.03e-07!50;UBERON:0006238!3.03e-07!50;UBERON:0002619!8.63e-07!17;UBERON:0000073!9.09e-07!75;UBERON:0001016!9.09e-07!75;UBERON:0002616!9.36e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0002021,3.51e-26,10;UBERON:0000411,3.51e-26,10;UBERON:0001950,3.51e-26,10;UBERON:0002619,1.03e-17,17;UBERON:0000956,6.86e-14,21;UBERON:0001869,6.86e-14,21;UBERON:0000203,6.86e-14,21;UBERON:0003080,6.10e-12,40;UBERON:0003528,2.86e-11,29;UBERON:0002791,2.86e-11,29;UBERON:0001893,2.86e-11,29;UBERON:0000955,3.09e-11,47;UBERON:0006238,3.09e-11,47;UBERON:0002020,7.08e-11,34;UBERON:0002780,9.62e-11,39;UBERON:0001890,9.62e-11,39;UBERON:0006240,9.62e-11,39;UBERON:0000073,1.72e-10,54;UBERON:0002616,6.01e-10,46;UBERON:0001049,1.05e-09,52;UBERON:0005068,1.05e-09,52;UBERON:0006241,1.05e-09,52;UBERON:0007135,1.05e-09,52;UBERON:0003056,3.89e-09,49;UBERON:0000025,4.56e-09,114;UBERON:0004111,4.09e-08,122;UBERON:0001017,7.35e-08,73;UBERON:0001016,1.51e-07,75;UBERON:0002346,3.13e-07,64;UBERON:0003075,3.13e-07,64;UBERON:0007284,3.13e-07,64|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.850432901510698,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.405507724878058,0.183546752161682,0,0,0,0,0,0,0,0,0,0.257259436035947,0.286533439938757,0,0,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,0.103689612308478,0,0,0.571301968807607,0.441737081903227,0.122490799214954,0.191690942036473,0.919218786610021,1.10115880999389,0.383062014255563,0.153606533256243,0,0.0914876436024097,0.52091337055676,0.279182999001381,0.56276261003168,1.37518422999129,0.294628585473668,1.28134512719193,0.372798891650601,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,1.28326477414318,2.54805239706646,0,0,0,0,0.45673551887624,0,0.29688427812965,0.173485326766136,0.304465478312141,0,0,0.23517741427141,0.125666591329675,0,0,0,0.323533699894818,0,0.484875253135222,0,0.585561594023094,0,0,0,0,0,1.04853447583376,0.457500602818626,0.753926112677186,0.521472960576829,2.55715457330331,1.45451631191692,1.29793010454206,0.509196819251581,0,0,0,0.130120442962704,0,0.180062129805349,0,0.340182495756639,0.12811372028485,0.468508622798644,0.258703370739016,0,0.378212160335639,0.175951124163949,0.219195732427575,1.11218899690239,0,0.205782136407943,0.995171334092466,0,0,0,0.828503090142008,0.234526059981096,0.540186184383045,1.18372367792605,0.196764231747404,0.308534225774757,1.16266972375204,1.07309360559848,0.116765342367169,0.329119699826961,0.164167464079095,0.243206428637567,0.146199987425332,0.219550115291051,0.536825675041487,1.68231958851302,0.308713837137853,0,0,1.2797295032114,0.696710015581316,0.644337306610467,0.403367049246685,0.444756087689741,0,0,0.329397909448022,0.251335208800269,0,0.19496408711912,0,0.216138049874694,0,0,0.342745537829186,2.25415471346161,0,0.387904974335251,0.420814919341911,0.316182685621286,0.147610147979602,0,0,0,0,0.196558995113203,0.224862112384854,0,0,0,0.287696137450811,0.162135226775035,0,0,1.11642284300551,0,0.252578877947112,0,0,0.739012760666419,0.189491411770485,0,0.509235257325564,0,0.502518772325447,0.238043640886014,0.585400943573396,1.10344600874334,1.32878813789265,0.797273843287435,1.63863314715738,2.59027472798843,2.31438493730419,0,0,0,0,0.321101179975584,0.820481806145422,0,0.504941854408746,0.315508219416257,0,0.646270193198397,0.238968797952552,0.222798674082394,0.283076530788832,0,0.584511715822624,0,1.92792789853084,0.141940085208269,0.35613120733451,0.977321756121456,0.494910368917606,0,0.728341908464944,0.302323556964751,0,0,0,0.516856586336442,0.363533729477506,0,0,0,0,0.680879211507576,0,0,0,0,0.535106452806212,0.164549020602121,0.304464949114599,0,0.42366414172764,0.220528398054962,0.49465875882444,0.161464426695906,0.844380948994182,0.835606408021955,0,0.291480836629851,0.556275906031529,0,0.619160603889667,0.370389054739423,0,0,0.228778173206523,0,0,0,0.954670618015114,0.316335993581135,0.203319467126849,0.432021363287205,0,0.218362563746178,0.674321731924103,0.495920734352016,0,0,0,0,0.598066184175915,0.496375471371293,0,0.645799117388655,0.675824501963113,0.704143431874524,0.5208175393758,0.209718688851422,0.483168241652012,0.288030006257865,0,0,0,0,0.179026695667481,0,0,0,0.100966449948148,0,0,0,0,0,0.226730383615211,0,0,0,0.386379188064381,0,0.549454872801795,0.214368379079066,0,2.25900737046827,1.38097570952153,2.29158205375759,5.84300819968538,2.74033007908257,1.5107877947794,1.35004500046361,1.35096360967266,1.81256963593682,1.55328093525546,0,0.798049746802062,0.512200817262403,0.243106717068294,0.209613162627982,0,0.222246727801615,0,0,0.252697211763798,0,0,0.280924522409647,0.320125762024346,0.34461281373368,1.42888107384922,0.231768651889711,0,0,0,1.02860775715625,0.70990322463735,0.238436189947321,0.436039249896986,0.470546902076653,0.507687647350059,0.548783918618318,0,0.135804113845862,0,0.711810108745045,0.29551344712669,0.409231043169689,0.309873682371932,0,0.249810577937946,0,0.859484216193193,0.191288332068843,0.220591419119515,0.463735671240843|short_description=p9@Prickle2}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:243548
|HGNC=
|TSSclassifier=NA
|UniProt=uniprot:Q80Y24,uniprot:A7YQ68
|association_with_transcript=-250bp_to_ENSMUST00000113445,NM_001134460,uc009cyx.2_5end
|cluster_id=chr6:92431636..92431640,-
|description=CAGE_peak_9_at_Prickle2_5end
|id=chr6:92431636..92431640,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002021!1.63e-08!10;UBERON:0000411!1.63e-08!10;UBERON:0001950!1.63e-08!10;UBERON:0000025!6.40e-08!114;UBERON:0002020!7.45e-08!34;UBERON:0004111!8.06e-08!122;UBERON:0001049!8.75e-08!52;UBERON:0005068!8.75e-08!52;UBERON:0006241!8.75e-08!52;UBERON:0007135!8.75e-08!52;UBERON:0001017!1.97e-07!73;UBERON:0005743!1.97e-07!73;UBERON:0000955!3.03e-07!50;UBERON:0006238!3.03e-07!50;UBERON:0002619!8.63e-07!17;UBERON:0000073!9.09e-07!75;UBERON:0001016!9.09e-07!75;UBERON:0002616!9.36e-07!49
|ontology_enrichment_uberon_v019_2=UBERON:0002021,3.51e-26,10;UBERON:0000411,3.51e-26,10;UBERON:0001950,3.51e-26,10;UBERON:0002619,1.03e-17,17;UBERON:0000956,6.86e-14,21;UBERON:0001869,6.86e-14,21;UBERON:0000203,6.86e-14,21;UBERON:0003080,6.10e-12,40;UBERON:0003528,2.86e-11,29;UBERON:0002791,2.86e-11,29;UBERON:0001893,2.86e-11,29;UBERON:0000955,3.09e-11,47;UBERON:0006238,3.09e-11,47;UBERON:0002020,7.08e-11,34;UBERON:0002780,9.62e-11,39;UBERON:0001890,9.62e-11,39;UBERON:0006240,9.62e-11,39;UBERON:0000073,1.72e-10,54;UBERON:0002616,6.01e-10,46;UBERON:0001049,1.05e-09,52;UBERON:0005068,1.05e-09,52;UBERON:0006241,1.05e-09,52;UBERON:0007135,1.05e-09,52;UBERON:0003056,3.89e-09,49;UBERON:0000025,4.56e-09,114;UBERON:0004111,4.09e-08,122;UBERON:0001017,7.35e-08,73;UBERON:0001016,1.51e-07,75;UBERON:0002346,3.13e-07,64;UBERON:0003075,3.13e-07,64;UBERON:0007284,3.13e-07,64
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.850432901510698,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.405507724878058,0.183546752161682,0,0,0,0,0,0,0,0,0,0.257259436035947,0.286533439938757,0,0,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,0.103689612308478,0,0,0.571301968807607,0.441737081903227,0.122490799214954,0.191690942036473,0.919218786610021,1.10115880999389,0.383062014255563,0.153606533256243,0,0.0914876436024097,0.52091337055676,0.279182999001381,0.56276261003168,1.37518422999129,0.294628585473668,1.28134512719193,0.372798891650601,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,1.28326477414318,2.54805239706646,0,0,0,0,0.45673551887624,0,0.29688427812965,0.173485326766136,0.304465478312141,0,0,0.23517741427141,0.125666591329675,0,0,0,0.323533699894818,0,0.484875253135222,0,0.585561594023094,0,0,0,0,0,1.04853447583376,0.457500602818626,0.753926112677186,0.521472960576829,2.55715457330331,1.45451631191692,1.29793010454206,0.509196819251581,0,0,0,0.130120442962704,0,0.180062129805349,0,0.340182495756639,0.12811372028485,0.468508622798644,0.258703370739016,0,0.378212160335639,0.175951124163949,0.219195732427575,1.11218899690239,0,0.205782136407943,0.995171334092466,0,0,0,0.828503090142008,0.234526059981096,0.540186184383045,1.18372367792605,0.196764231747404,0.308534225774757,1.16266972375204,1.07309360559848,0.116765342367169,0.329119699826961,0.164167464079095,0.243206428637567,0.146199987425332,0.219550115291051,0.536825675041487,1.68231958851302,0.308713837137853,0,0,1.2797295032114,0.696710015581316,0.644337306610467,0.403367049246685,0.444756087689741,0,0,0.329397909448022,0.251335208800269,0,0.19496408711912,0,0.216138049874694,0,0,0.342745537829186,2.25415471346161,0,0.387904974335251,0.420814919341911,0.316182685621286,0.147610147979602,0,0,0,0,0.196558995113203,0.224862112384854,0,0,0,0.287696137450811,0.162135226775035,0,0,1.11642284300551,0,0.252578877947112,0,0,0.739012760666419,0.189491411770485,0,0.509235257325564,0,0.502518772325447,0.238043640886014,0.585400943573396,1.10344600874334,1.32878813789265,0.797273843287435,1.63863314715738,2.59027472798843,2.31438493730419,0,0,0,0,0.321101179975584,0.820481806145422,0,0.504941854408746,0.315508219416257,0,0.646270193198397,0.238968797952552,0.222798674082394,0.283076530788832,0,0.584511715822624,0,1.92792789853084,0.141940085208269,0.35613120733451,0.977321756121456,0.494910368917606,0,0.728341908464944,0.302323556964751,0,0,0,0.516856586336442,0.363533729477506,0,0,0,0,0.680879211507576,0,0,0,0,0.535106452806212,0.164549020602121,0.304464949114599,0,0.42366414172764,0.220528398054962,0.49465875882444,0.161464426695906,0.844380948994182,0.835606408021955,0,0.291480836629851,0.556275906031529,0,0.619160603889667,0.370389054739423,0,0,0.228778173206523,0,0,0,0.954670618015114,0.316335993581135,0.203319467126849,0.432021363287205,0,0.218362563746178,0.674321731924103,0.495920734352016,0,0,0,0,0.598066184175915,0.496375471371293,0,0.645799117388655,0.675824501963113,0.704143431874524,0.5208175393758,0.209718688851422,0.483168241652012,0.288030006257865,0,0,0,0,0.179026695667481,0,0,0,0.100966449948148,0,0,0,0,0,0.226730383615211,0,0,0,0.386379188064381,0,0.549454872801795,0.214368379079066,0,2.25900737046827,1.38097570952153,2.29158205375759,5.84300819968538,2.74033007908257,1.5107877947794,1.35004500046361,1.35096360967266,1.81256963593682,1.55328093525546,0,0.798049746802062,0.512200817262403,0.243106717068294,0.209613162627982,0,0.222246727801615,0,0,0.252697211763798,0,0,0.280924522409647,0.320125762024346,0.34461281373368,1.42888107384922,0.231768651889711,0,0,0,1.02860775715625,0.70990322463735,0.238436189947321,0.436039249896986,0.470546902076653,0.507687647350059,0.548783918618318,0,0.135804113845862,0,0.711810108745045,0.29551344712669,0.409231043169689,0.309873682371932,0,0.249810577937946,0,0.859484216193193,0.191288332068843,0.220591419119515,0.463735671240843
|short_description=p9@Prickle2
}}

Revision as of 08:13, 6 August 2015

Short description:p9@Prickle2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_9_at_Prickle2_5end
Coexpression cluster:NA
Association with transcript: -250bp_to_ENSMUST00000113445, NM_001134460, uc009cyx.2_5end
EntrezGene:243548
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p9@Prickle2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.85
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.41
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.38
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.38
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.05
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.75
cortex, adult.CNhs10473.12-14D50.52
cortex, neonate N30.CNhs11107.1392-42F22.56
diencephalon, adult.CNhs10482.20-12F21.45
diencephalon, neonate N30.CNhs11201.1388-42B21.30
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.51
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.34
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.47
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I61.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.83
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D41.18
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E51.16
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.24
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.54
hippocampus, adult.CNhs10478.13-16E81.68
hippocampus, neonate N00.CNhs11228.627-43G10.31
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.28
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.42
kidney, neonate N10.CNhs11206.758-6D50.32
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H21.12
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.74
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E51.10
lung, neonate N07.CNhs11111.715-19A31.33
lung, neonate N10.CNhs11219.750-23E60.80
lung, neonate N20.CNhs11109.822-18A41.64
lung, neonate N25.CNhs11119.1359-25C72.59
lung, neonate N30.CNhs11133.1394-42H22.31
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.32
medulla oblongata, neonate N30.CNhs11200.1396-42A30.82
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I91.93
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.98
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.84
skin, neonate N06.CNhs11097.693-20I50.84
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.56
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.67
stomach, neonate N07.CNhs11210.718-18A90.50
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.60
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.65
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B70.70
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.26
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D75.84
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.81
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
occipital lobe3.51e-2610
visual cortex3.51e-2610
neocortex3.51e-2610
regional part of cerebral cortex1.03e-1717
cerebral cortex6.86e-1421
cerebral hemisphere6.86e-1421
pallium6.86e-1421
anterior neural tube6.10e-1240
brain grey matter2.86e-1129
regional part of telencephalon2.86e-1129
telencephalon2.86e-1129
brain3.09e-1147
future brain3.09e-1147
gray matter7.08e-1134
regional part of forebrain9.62e-1139
forebrain9.62e-1139
future forebrain9.62e-1139
regional part of nervous system1.72e-1054
regional part of brain6.01e-1046
neural tube1.05e-0952
neural rod1.05e-0952
future spinal cord1.05e-0952
neural keel1.05e-0952
pre-chordal neural plate3.89e-0949
tube4.56e-09114
anatomical conduit4.09e-08122
central nervous system7.35e-0873
nervous system1.51e-0775
neurectoderm3.13e-0764
neural plate3.13e-0764
presumptive neural plate3.13e-0764
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