FFCP PHASE1:Mm9::chr5:125870471..125870484,-: Difference between revisions
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{{FFCP|EntrezGene=22190|HGNC=|MCL_coexpression_id=99|UniProt=P0CG50|association_with_transcript=-84bp_to_NM_019639,uc012edr.1_5end|description=CAGE_peak_7_at_Ubc_5end|id=chr5:125870471..125870484,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000182,1.86e-09,5;CL:0000068,2.16e-08,3;CL:0002202,2.16e-08,3;CL:0000069,2.16e-08,3;CL:0002632,2.16e-08,3;CL:0002368,2.16e-08,3;CL:0000307,2.16e-08,3;CL:0000377,2.16e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003914!1.42e-08!47|ontology_enrichment_uberon_v019_2=UBERON:0003126,2.16e-08,3;UBERON:0001005,2.16e-08,3;UBERON:0007196,2.16e-08,3;UBERON:0001558,2.16e-08,3;UBERON:0002107,7.62e-07,22;UBERON:0007499,7.62e-07,22;UBERON:0006925,7.62e-07,22;UBERON:0009497,7.62e-07,22;UBERON:0000015,7.62e-07,22;UBERON:0002423,7.62e-07,22;UBERON:0006235,7.62e-07,22;UBERON:0008835,7.62e-07,22;UBERON:0003894,7.62e-07,22;UBERON:0004161,7.62e-07,22;UBERON:0008836,7.62e-07,22;UBERON:0003104,9.90e-07,61;UBERON:0009142,9.90e-07,61|phase1_expression=0.480446541314382,0.348975407639361,0.454999239389536,0,0,0.671517087647559,0,0,0.281577444303333,0.234064526321993,0,0.0797721589953364,0,0,0,0,0,0,0,0,0.935476191661768,0,0,0,0,0,0.430761996159075,0.215471232685889,0,0,0,0,0,0,0.288851619751275,0,0,0.418531630736908,0,0,1.17646297606203,0.683045484958446,0,0.251793635951155,0.912392380975631,0,0,0.436050312760893,0.219686182734472,0.58328969722285,0.699932108126813,1.43752564364972,0,0,0,1.54355661621568,0.573066879877513,1.03134418455488,0,0,0,0.677689064138264,0.889294796111139,1.3498495759221,0,4.2628806896766,0.898800331555214,0.768436610643109,0,0,0,0.285650984403804,0.662605622854841,0,0,0,0,0.127687338085188,0,0,0,0,0.837548997004143,0.56276261003168,0.61119299110724,0,0.142371680799103,0,0.530083353332288,0.151143120213571,5.79728977403356,1.72084775396277,34.6785380190953,2.15881276655127,1.29955283489534,0.896053774194671,0.140444420131752,0,0,0,0,0,0,0,1.08245520505607,2.02687892380079,1.51657333504435,0.68510327831436,0,1.1875371125186,0.173485326766136,0.913396434936424,0.691846491768175,0.904335843315735,0.823120949949934,0.753999547978053,0.494389935468748,0.86759614151947,3.5384422077995,0.323533699894818,0.441683036920787,1.45462575940567,0,0,0,0,0.838705871541442,2.39961092397363,1.01656181658452,0.149790639404823,0,0.125654352112864,0,0.511430914660661,0.20778804455956,0.486723789203273,0.509196819251581,0.746441823660558,0.758168275301024,0.631325567659422,0,0,0.180062129805349,0,0.272145996605311,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0.702213187313235,0.257347907114715,2.55747149456033,0.414251545071004,0.234526059981096,0.36012412292203,0.23674473558521,0.196764231747404,0.308534225774757,0,0.268273401399619,0.583826711835847,0.822799249567402,0.492502392237286,0.891756905004413,0.730999937126662,1.09775057645525,2.14730270016595,0.210289948564127,0.102904612379284,0.991256348951394,0.264450566663544,0,0,0.257734922644187,0,0,0,0,0.164698954724011,0,0.198956472041151,0,0,0,0.199141273254367,0.189667900953082,0.114248512609729,0,0,0,0.210407459670956,0.505892296994058,0.590440591918409,1.255989822731,0.987177311374404,0.592905254174298,0,0,0,0.202860121388503,0.482354319504834,0,0,1.13494658742525,0.274561413188081,0,0.744281895337007,0.312037673114561,1.26289438973556,3.94674309748207,0.964887042726734,0.184753190166605,0.189491411770485,0,0,0.234690248288502,0.167506257441816,0.238043640886014,0.390267295715598,0,0.664394068946325,0.478364305972461,0.491589944147214,0.172684981865896,0.433947175744535,0,1.08781136763742,0.491764273019036,0,0.481651769963376,0.586058432961016,0,7.06918596172244,0.94652465824877,0,0.646270193198397,1.67278158566786,0.668396022247182,1.13230612315533,0.404810701674894,0.292255857911312,0.395287777946524,0,0.567760340833074,0.178065603667255,0.651547837414304,0.659880491890142,0,0,0,0,0,0,0.258428293168221,0,0.356497378384721,0,0,0,0.340439605753788,0,0,0.214337035031592,0,0,0.164549020602121,0.304464949114599,0,0,0,0.49465875882444,0.484393280087717,0.0603129249281559,0.238744688006273,0.164140899745061,0.582961673259701,0.927126510052548,0,0.206386867963223,0,0,0,0,0.849892149969277,0.69975726161829,2.9021994498929,0,0,0.609958401380546,0,0.209088296014469,0.436725127492355,0.134864346384821,0.495920734352016,0,0.90730481304255,0,21.9840246086834,0.299033092087958,0.165458490457098,0.194451188344048,0.387479470433193,0.506868376472335,0.352071715937262,0,0.209718688851422,0,7.4887801627045,0.316011120628178,0,0,0,0,0.198681354781265,0,0.147689527174577,0,0,0,0.0974578807397524,0.0962118416403295,0.116876902181569,0,0,0,0.167884616364078,1.35232715822533,0.750729901804728,0.549454872801795,0.214368379079066,0,0.564751842617067,0,0,0,0,0,0.675022500231806,0,0,0.51776031175182,0,0,0,0,0.209613162627982,0.367687016900028,0.222246727801615,0,0.320919209591815,0,0,0.188626341386076,0.187283014939765,0,0.114870937911227,0,0.115884325944855,0.192909220463705,0,0,0.342869252385415,0.354951612318675,0.238436189947321,0,0.0941093804153306,0.0846146078916765,0.365855945745545,0,0,0.561142271657738,0.118635018124174,0.0985044823755635,0.409231043169689,0,0,0,0.233931608445408,0.429742108096597,0.765153328275374,0,0|short_description=p7@Ubc}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:22190 | |||
|HGNC= | |||
|MCL_coexpression_id=99 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P0CG50 | |||
|association_with_transcript=-84bp_to_NM_019639,uc012edr.1_5end | |||
|cluster_id=chr5:125870471..125870484,- | |||
|description=CAGE_peak_7_at_Ubc_5end | |||
|id=chr5:125870471..125870484,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.86e-09,5;CL:0000068,2.16e-08,3;CL:0002202,2.16e-08,3;CL:0000069,2.16e-08,3;CL:0002632,2.16e-08,3;CL:0002368,2.16e-08,3;CL:0000307,2.16e-08,3;CL:0000377,2.16e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!1.42e-08!47 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,2.16e-08,3;UBERON:0001005,2.16e-08,3;UBERON:0007196,2.16e-08,3;UBERON:0001558,2.16e-08,3;UBERON:0002107,7.62e-07,22;UBERON:0007499,7.62e-07,22;UBERON:0006925,7.62e-07,22;UBERON:0009497,7.62e-07,22;UBERON:0000015,7.62e-07,22;UBERON:0002423,7.62e-07,22;UBERON:0006235,7.62e-07,22;UBERON:0008835,7.62e-07,22;UBERON:0003894,7.62e-07,22;UBERON:0004161,7.62e-07,22;UBERON:0008836,7.62e-07,22;UBERON:0003104,9.90e-07,61;UBERON:0009142,9.90e-07,61 | |||
|phase1_expression=0.480446541314382,0.348975407639361,0.454999239389536,0,0,0.671517087647559,0,0,0.281577444303333,0.234064526321993,0,0.0797721589953364,0,0,0,0,0,0,0,0,0.935476191661768,0,0,0,0,0,0.430761996159075,0.215471232685889,0,0,0,0,0,0,0.288851619751275,0,0,0.418531630736908,0,0,1.17646297606203,0.683045484958446,0,0.251793635951155,0.912392380975631,0,0,0.436050312760893,0.219686182734472,0.58328969722285,0.699932108126813,1.43752564364972,0,0,0,1.54355661621568,0.573066879877513,1.03134418455488,0,0,0,0.677689064138264,0.889294796111139,1.3498495759221,0,4.2628806896766,0.898800331555214,0.768436610643109,0,0,0,0.285650984403804,0.662605622854841,0,0,0,0,0.127687338085188,0,0,0,0,0.837548997004143,0.56276261003168,0.61119299110724,0,0.142371680799103,0,0.530083353332288,0.151143120213571,5.79728977403356,1.72084775396277,34.6785380190953,2.15881276655127,1.29955283489534,0.896053774194671,0.140444420131752,0,0,0,0,0,0,0,1.08245520505607,2.02687892380079,1.51657333504435,0.68510327831436,0,1.1875371125186,0.173485326766136,0.913396434936424,0.691846491768175,0.904335843315735,0.823120949949934,0.753999547978053,0.494389935468748,0.86759614151947,3.5384422077995,0.323533699894818,0.441683036920787,1.45462575940567,0,0,0,0,0.838705871541442,2.39961092397363,1.01656181658452,0.149790639404823,0,0.125654352112864,0,0.511430914660661,0.20778804455956,0.486723789203273,0.509196819251581,0.746441823660558,0.758168275301024,0.631325567659422,0,0,0.180062129805349,0,0.272145996605311,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0.702213187313235,0.257347907114715,2.55747149456033,0.414251545071004,0.234526059981096,0.36012412292203,0.23674473558521,0.196764231747404,0.308534225774757,0,0.268273401399619,0.583826711835847,0.822799249567402,0.492502392237286,0.891756905004413,0.730999937126662,1.09775057645525,2.14730270016595,0.210289948564127,0.102904612379284,0.991256348951394,0.264450566663544,0,0,0.257734922644187,0,0,0,0,0.164698954724011,0,0.198956472041151,0,0,0,0.199141273254367,0.189667900953082,0.114248512609729,0,0,0,0.210407459670956,0.505892296994058,0.590440591918409,1.255989822731,0.987177311374404,0.592905254174298,0,0,0,0.202860121388503,0.482354319504834,0,0,1.13494658742525,0.274561413188081,0,0.744281895337007,0.312037673114561,1.26289438973556,3.94674309748207,0.964887042726734,0.184753190166605,0.189491411770485,0,0,0.234690248288502,0.167506257441816,0.238043640886014,0.390267295715598,0,0.664394068946325,0.478364305972461,0.491589944147214,0.172684981865896,0.433947175744535,0,1.08781136763742,0.491764273019036,0,0.481651769963376,0.586058432961016,0,7.06918596172244,0.94652465824877,0,0.646270193198397,1.67278158566786,0.668396022247182,1.13230612315533,0.404810701674894,0.292255857911312,0.395287777946524,0,0.567760340833074,0.178065603667255,0.651547837414304,0.659880491890142,0,0,0,0,0,0,0.258428293168221,0,0.356497378384721,0,0,0,0.340439605753788,0,0,0.214337035031592,0,0,0.164549020602121,0.304464949114599,0,0,0,0.49465875882444,0.484393280087717,0.0603129249281559,0.238744688006273,0.164140899745061,0.582961673259701,0.927126510052548,0,0.206386867963223,0,0,0,0,0.849892149969277,0.69975726161829,2.9021994498929,0,0,0.609958401380546,0,0.209088296014469,0.436725127492355,0.134864346384821,0.495920734352016,0,0.90730481304255,0,21.9840246086834,0.299033092087958,0.165458490457098,0.194451188344048,0.387479470433193,0.506868376472335,0.352071715937262,0,0.209718688851422,0,7.4887801627045,0.316011120628178,0,0,0,0,0.198681354781265,0,0.147689527174577,0,0,0,0.0974578807397524,0.0962118416403295,0.116876902181569,0,0,0,0.167884616364078,1.35232715822533,0.750729901804728,0.549454872801795,0.214368379079066,0,0.564751842617067,0,0,0,0,0,0.675022500231806,0,0,0.51776031175182,0,0,0,0,0.209613162627982,0.367687016900028,0.222246727801615,0,0.320919209591815,0,0,0.188626341386076,0.187283014939765,0,0.114870937911227,0,0.115884325944855,0.192909220463705,0,0,0.342869252385415,0.354951612318675,0.238436189947321,0,0.0941093804153306,0.0846146078916765,0.365855945745545,0,0,0.561142271657738,0.118635018124174,0.0985044823755635,0.409231043169689,0,0,0,0.233931608445408,0.429742108096597,0.765153328275374,0,0 | |||
|short_description=p7@Ubc | |||
}} |
Revision as of 08:12, 6 August 2015
Short description: | p7@Ubc |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Ubc_5end |
Coexpression cluster: | MCL_coexpression_mm9:99 |
Association with transcript: | -84bp_to_NM_019639, uc012edr.1_5end |
EntrezGene: | 22190 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.86e-09 | 5 |
duct epithelial cell | 2.16e-08 | 3 |
epithelial cell of tracheobronchial tree | 2.16e-08 | 3 |
branched duct epithelial cell | 2.16e-08 | 3 |
epithelial cell of lower respiratory tract | 2.16e-08 | 3 |
respiratory epithelial cell | 2.16e-08 | 3 |
tracheal epithelial cell | 2.16e-08 | 3 |
tracheoblast | 2.16e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
trachea | 2.16e-08 | 3 |
respiratory airway | 2.16e-08 | 3 |
tracheobronchial tree | 2.16e-08 | 3 |
lower respiratory tract | 2.16e-08 | 3 |
liver | 7.62e-07 | 22 |
epithelial sac | 7.62e-07 | 22 |
digestive gland | 7.62e-07 | 22 |
epithelium of foregut-midgut junction | 7.62e-07 | 22 |
anatomical boundary | 7.62e-07 | 22 |
hepatobiliary system | 7.62e-07 | 22 |
foregut-midgut junction | 7.62e-07 | 22 |
hepatic diverticulum | 7.62e-07 | 22 |
liver primordium | 7.62e-07 | 22 |
septum transversum | 7.62e-07 | 22 |
liver bud | 7.62e-07 | 22 |
mesenchyme | 9.90e-07 | 61 |
entire embryonic mesenchyme | 9.90e-07 | 61 |