FFCP PHASE1:Mm9::chr16:30310859..30310875,-: Difference between revisions
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{{FFCP|EntrezGene=14729|HGNC=|MCL_coexpression_id=1939|UniProt=Q9QZU3|association_with_transcript=0bp_to_ENSMUST00000061190,NM_008148,uc007ywo.1_5end|description=CAGE_peak_1_at_Gp5_5end|id=chr16:30310859..30310875,-|ontology_enrichment_celltype=CL:0000050!1.02e-07!9|ontology_enrichment_celltype_v019_2=CL:0000764,1.60e-09,3;CL:0000765,1.60e-09,3;CL:0000038,1.60e-09,3;CL:0000547,1.60e-09,3;CL:0000050,2.07e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:2531,1.60e-09,3;DOID:0060083,1.60e-09,3;DOID:1240,1.60e-09,3|ontology_enrichment_uberon=UBERON:0009569!9.98e-09!66;UBERON:0002048!3.19e-08!14;UBERON:0000117!3.19e-08!14;UBERON:0000171!3.19e-08!14;UBERON:0000170!3.19e-08!14;UBERON:0005597!3.19e-08!14;UBERON:0000118!3.19e-08!14|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.07e-10,6;UBERON:0004457,1.07e-10,6;UBERON:0000042,1.07e-10,6;UBERON:0004854,1.07e-10,6;UBERON:0009034,1.07e-10,6;UBERON:0002095,1.07e-10,6;UBERON:0004782,1.07e-10,6;UBERON:0003281,1.07e-10,6;UBERON:0009664,1.07e-10,6;UBERON:0002296,1.07e-10,6;UBERON:0005602,1.07e-10,6;UBERON:0001179,1.07e-10,6;UBERON:0006293,1.07e-10,6;UBERON:0009569,6.07e-10,66;UBERON:0005172,6.39e-09,49;UBERON:0005173,6.39e-09,49;UBERON:0002417,6.39e-09,49;UBERON:0000916,6.39e-09,49;UBERON:0003887,7.86e-09,10;UBERON:0002107,2.07e-08,22;UBERON:0007499,2.07e-08,22;UBERON:0006925,2.07e-08,22;UBERON:0009497,2.07e-08,22;UBERON:0000015,2.07e-08,22;UBERON:0002423,2.07e-08,22;UBERON:0006235,2.07e-08,22;UBERON:0008835,2.07e-08,22;UBERON:0003894,2.07e-08,22;UBERON:0004161,2.07e-08,22;UBERON:0008836,2.07e-08,22;UBERON:0009854,5.69e-08,23;UBERON:0009856,5.69e-08,23;UBERON:0005177,1.31e-07,79;UBERON:0002365,3.37e-07,25;UBERON:0002330,3.37e-07,25|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99865857089398,0.607425802169478,2.09868563438444,0.946386496074713,0.548457734422955,0.84877930359606,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,20.9560122241678,43.6695999185045,31.6963362030877,0,0,0,0.418531630736908,0,0,0,0.683045484958446,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0.191690942036473,0,0,0,0,0,0.182975287204819,0,0,0.56276261003168,0.15279824777681,0,0,0,0,0,0,0.860423876981386,0,0,0,0,2.66844398250329,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0.693941307064543,0.608930956624282,0.230615497256059,0.301445281105245,0.117588707135705,0,0,0.433798070759735,21.230653246797,0.485300549842228,7.72945314611377,1.45462575940567,0,0,0,0,0.239630249011841,0.599902730993408,0.127070227073065,0,0,0.125654352112864,0,0,0,0,0,4.47865094196335,0,0,0.520481771850815,0,0.180062129805349,0.150704817835715,0,0,0,0,0.646703978798527,0.189106080167819,0.175951124163949,0,0,0,0.205782136407943,0.59710280045548,0,0,0,2.69263504296152,0,0,0.23674473558521,0,0,0.465067889500816,0.268273401399619,0,0.16455984991348,0.164167464079095,0.243206428637567,0.146199987425332,0.658650345873152,0.268412837520744,0,0,0,0,0.426576501070468,0.464473343720877,0.128867461322093,0,0.22237804384487,0.190225626112559,0,0,0.251335208800269,0,0,0,0,0,0.189667900953082,0.114248512609729,0,0,0,0,0,0,0,0,0,9.67701613153345,8.64859578498093,6.52100125916076,6.6943840058206,6.51178331331525,5.60176873919124,8.34318798607351,5.67473293712624,3.0201755450689,0,0.372140947668503,0.312037673114561,0.252578877947112,0,0,3.14080423283228,1.13694847062291,0.325929952884052,0.509235257325564,0.234690248288502,0.335012514883631,0.714130922658041,1.56106918286239,0.472905432318573,0.664394068946325,0.318909537314974,0.81931657357869,0.690739927463582,1.3018415272336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0.485561272309963,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0,0,0,0,0,0.23467170806371,0.21183207086382,0,0,0,0.0603129249281559,0,0,0,0,11.1066072518604,0.206386867963223,1.11116716421827,10.1718966782533,3.00727300986255,3.43167259809784,0.169978429993855,0.279902904647316,0,0,0.790839983952838,0,0.108005340821801,0,0,0.134864346384821,0,0,0,0,0,0,0.330916980914195,0,0.129159823477731,0,0,0.13020438484395,0,0,0,0,0,0.205421914329655,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.798049746802062,0.682934423016537,1.21553358534147,0.209613162627982,0,0.666740183404846,0.412070114477788,0.320919209591815,0,0.50695859978048,0.188626341386076,0.468207537349412,0.384150914429216,0.516919220600519,0,0.231768651889711,0.192909220463705,1.23625770240992,0.883193520806384,0,0.532427418478012,0.476872379894642,0,0.564656282491984,0.25384382367503,0.548783918618318,0.263069711437843,0.407412341537585,0.561142271657738,0.474540072496697,0.788035859004508,1.22769312950907,0,0,0.249810577937946,1.16965804222704,1.50409737833809,0.191288332068843,1.54413993383661,1.15933917810211|short_description=p1@Gp5}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:14729 | |||
|HGNC= | |||
|MCL_coexpression_id=1939 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9QZU3 | |||
|association_with_transcript=0bp_to_ENSMUST00000061190,NM_008148,uc007ywo.1_5end | |||
|cluster_id=chr16:30310859..30310875,- | |||
|description=CAGE_peak_1_at_Gp5_5end | |||
|id=chr16:30310859..30310875,- | |||
|ontology_enrichment_celltype=CL:0000050!1.02e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,1.60e-09,3;CL:0000765,1.60e-09,3;CL:0000038,1.60e-09,3;CL:0000547,1.60e-09,3;CL:0000050,2.07e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.60e-09,3;DOID:0060083,1.60e-09,3;DOID:1240,1.60e-09,3 | |||
|ontology_enrichment_uberon=UBERON:0009569!9.98e-09!66;UBERON:0002048!3.19e-08!14;UBERON:0000117!3.19e-08!14;UBERON:0000171!3.19e-08!14;UBERON:0000170!3.19e-08!14;UBERON:0005597!3.19e-08!14;UBERON:0000118!3.19e-08!14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.07e-10,6;UBERON:0004457,1.07e-10,6;UBERON:0000042,1.07e-10,6;UBERON:0004854,1.07e-10,6;UBERON:0009034,1.07e-10,6;UBERON:0002095,1.07e-10,6;UBERON:0004782,1.07e-10,6;UBERON:0003281,1.07e-10,6;UBERON:0009664,1.07e-10,6;UBERON:0002296,1.07e-10,6;UBERON:0005602,1.07e-10,6;UBERON:0001179,1.07e-10,6;UBERON:0006293,1.07e-10,6;UBERON:0009569,6.07e-10,66;UBERON:0005172,6.39e-09,49;UBERON:0005173,6.39e-09,49;UBERON:0002417,6.39e-09,49;UBERON:0000916,6.39e-09,49;UBERON:0003887,7.86e-09,10;UBERON:0002107,2.07e-08,22;UBERON:0007499,2.07e-08,22;UBERON:0006925,2.07e-08,22;UBERON:0009497,2.07e-08,22;UBERON:0000015,2.07e-08,22;UBERON:0002423,2.07e-08,22;UBERON:0006235,2.07e-08,22;UBERON:0008835,2.07e-08,22;UBERON:0003894,2.07e-08,22;UBERON:0004161,2.07e-08,22;UBERON:0008836,2.07e-08,22;UBERON:0009854,5.69e-08,23;UBERON:0009856,5.69e-08,23;UBERON:0005177,1.31e-07,79;UBERON:0002365,3.37e-07,25;UBERON:0002330,3.37e-07,25 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99865857089398,0.607425802169478,2.09868563438444,0.946386496074713,0.548457734422955,0.84877930359606,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,20.9560122241678,43.6695999185045,31.6963362030877,0,0,0,0.418531630736908,0,0,0,0.683045484958446,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0.191690942036473,0,0,0,0,0,0.182975287204819,0,0,0.56276261003168,0.15279824777681,0,0,0,0,0,0,0.860423876981386,0,0,0,0,2.66844398250329,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0.693941307064543,0.608930956624282,0.230615497256059,0.301445281105245,0.117588707135705,0,0,0.433798070759735,21.230653246797,0.485300549842228,7.72945314611377,1.45462575940567,0,0,0,0,0.239630249011841,0.599902730993408,0.127070227073065,0,0,0.125654352112864,0,0,0,0,0,4.47865094196335,0,0,0.520481771850815,0,0.180062129805349,0.150704817835715,0,0,0,0,0.646703978798527,0.189106080167819,0.175951124163949,0,0,0,0.205782136407943,0.59710280045548,0,0,0,2.69263504296152,0,0,0.23674473558521,0,0,0.465067889500816,0.268273401399619,0,0.16455984991348,0.164167464079095,0.243206428637567,0.146199987425332,0.658650345873152,0.268412837520744,0,0,0,0,0.426576501070468,0.464473343720877,0.128867461322093,0,0.22237804384487,0.190225626112559,0,0,0.251335208800269,0,0,0,0,0,0.189667900953082,0.114248512609729,0,0,0,0,0,0,0,0,0,9.67701613153345,8.64859578498093,6.52100125916076,6.6943840058206,6.51178331331525,5.60176873919124,8.34318798607351,5.67473293712624,3.0201755450689,0,0.372140947668503,0.312037673114561,0.252578877947112,0,0,3.14080423283228,1.13694847062291,0.325929952884052,0.509235257325564,0.234690248288502,0.335012514883631,0.714130922658041,1.56106918286239,0.472905432318573,0.664394068946325,0.318909537314974,0.81931657357869,0.690739927463582,1.3018415272336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0.485561272309963,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0,0,0,0,0,0.23467170806371,0.21183207086382,0,0,0,0.0603129249281559,0,0,0,0,11.1066072518604,0.206386867963223,1.11116716421827,10.1718966782533,3.00727300986255,3.43167259809784,0.169978429993855,0.279902904647316,0,0,0.790839983952838,0,0.108005340821801,0,0,0.134864346384821,0,0,0,0,0,0,0.330916980914195,0,0.129159823477731,0,0,0.13020438484395,0,0,0,0,0,0.205421914329655,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.798049746802062,0.682934423016537,1.21553358534147,0.209613162627982,0,0.666740183404846,0.412070114477788,0.320919209591815,0,0.50695859978048,0.188626341386076,0.468207537349412,0.384150914429216,0.516919220600519,0,0.231768651889711,0.192909220463705,1.23625770240992,0.883193520806384,0,0.532427418478012,0.476872379894642,0,0.564656282491984,0.25384382367503,0.548783918618318,0.263069711437843,0.407412341537585,0.561142271657738,0.474540072496697,0.788035859004508,1.22769312950907,0,0,0.249810577937946,1.16965804222704,1.50409737833809,0.191288332068843,1.54413993383661,1.15933917810211 | |||
|short_description=p1@Gp5 | |||
}} |
Revision as of 06:58, 6 August 2015
Short description: | p1@Gp5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gp5_5end |
Coexpression cluster: | MCL_coexpression_mm9:1939 |
Association with transcript: | 0bp_to_ENSMUST00000061190, NM_008148, uc007ywo.1_5end |
EntrezGene: | 14729 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 1.60e-09 | 3 |
erythroblast | 1.60e-09 | 3 |
erythroid progenitor cell | 1.60e-09 | 3 |
proerythroblast | 1.60e-09 | 3 |
megakaryocyte-erythroid progenitor cell | 2.07e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
spleen | 1.07e-10 | 6 |
cavity lining | 1.07e-10 | 6 |
serous membrane | 1.07e-10 | 6 |
gastrointestinal system mesentery | 1.07e-10 | 6 |
stomach region | 1.07e-10 | 6 |
mesentery | 1.07e-10 | 6 |
gastrointestinal system serosa | 1.07e-10 | 6 |
mesentery of stomach | 1.07e-10 | 6 |
gut mesentery | 1.07e-10 | 6 |
dorsal mesentery | 1.07e-10 | 6 |
dorsal mesogastrium | 1.07e-10 | 6 |
peritoneal cavity | 1.07e-10 | 6 |
spleen primordium | 1.07e-10 | 6 |
subdivision of trunk | 6.07e-10 | 66 |
abdomen element | 6.39e-09 | 49 |
abdominal segment element | 6.39e-09 | 49 |
abdominal segment of trunk | 6.39e-09 | 49 |
abdomen | 6.39e-09 | 49 |
intraembryonic coelom | 7.86e-09 | 10 |
liver | 2.07e-08 | 22 |
epithelial sac | 2.07e-08 | 22 |
digestive gland | 2.07e-08 | 22 |
epithelium of foregut-midgut junction | 2.07e-08 | 22 |
anatomical boundary | 2.07e-08 | 22 |
hepatobiliary system | 2.07e-08 | 22 |
foregut-midgut junction | 2.07e-08 | 22 |
hepatic diverticulum | 2.07e-08 | 22 |
liver primordium | 2.07e-08 | 22 |
septum transversum | 2.07e-08 | 22 |
liver bud | 2.07e-08 | 22 |
digestive tract diverticulum | 5.69e-08 | 23 |
sac | 5.69e-08 | 23 |
trunk region element | 1.31e-07 | 79 |
exocrine gland | 3.37e-07 | 25 |
exocrine system | 3.37e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.60e-09 | 3 |
immune system cancer | 1.60e-09 | 3 |
leukemia | 1.60e-09 | 3 |