FFCP PHASE1:Mm9::chrX:20527671..20527719,-: Difference between revisions
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{{FFCP|EntrezGene=13712|HGNC=|MCL_coexpression_id=1|UniProt=P41969,C7C6A8|association_with_transcript=6bp_to_NM_007922,uc009suc.1,uc009sud.1_5end|description=CAGE_peak_1_at_Elk1_5end|id=chrX:20527671..20527719,-|ontology_enrichment_celltype=CL:0000055!2.08e-12!50;CL:0002319!6.71e-12!43;CL:0000221!1.64e-11!44;CL:0000133!1.64e-11!44;CL:0000393!1.37e-10!39;CL:0000211!1.37e-10!39;CL:0000540!2.59e-09!33;CL:0000047!2.59e-09!33;CL:0000031!2.59e-09!33;CL:0000404!2.59e-09!33;CL:0000117!3.75e-08!23;CL:0000337!3.75e-08!23|ontology_enrichment_celltype_v019_2=CL:0002319,6.71e-12,43;CL:0000221,1.64e-11,44;CL:0000133,1.64e-11,44;CL:0000393,1.37e-10,39;CL:0000211,1.37e-10,39;CL:0000540,2.59e-09,33;CL:0000047,2.59e-09,33;CL:0000031,2.59e-09,33;CL:0000404,2.59e-09,33;CL:0000117,3.75e-08,23;CL:0000337,3.75e-08,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!5.36e-27!73;UBERON:0005743!5.36e-27!73;UBERON:0000073!3.02e-26!75;UBERON:0001016!3.02e-26!75;UBERON:0004121!1.62e-22!102;UBERON:0000924!1.62e-22!102;UBERON:0006601!1.62e-22!102;UBERON:0000955!8.70e-22!50;UBERON:0006238!8.70e-22!50;UBERON:0002616!3.83e-21!49;UBERON:0001049!2.19e-20!52;UBERON:0005068!2.19e-20!52;UBERON:0006241!2.19e-20!52;UBERON:0007135!2.19e-20!52;UBERON:0000033!4.47e-20!63;UBERON:0002346!1.80e-19!71;UBERON:0003075!1.80e-19!71;UBERON:0007284!1.80e-19!71;UBERON:0003056!1.72e-17!49;UBERON:0003080!7.30e-17!40;UBERON:0002791!2.31e-16!29;UBERON:0003528!2.31e-16!29;UBERON:0001893!2.31e-16!29;UBERON:0002780!2.77e-16!39;UBERON:0001890!2.77e-16!39;UBERON:0006240!2.77e-16!39;UBERON:0002020!5.61e-16!34;UBERON:0000956!1.05e-13!21;UBERON:0001869!1.05e-13!21;UBERON:0000203!1.05e-13!21;UBERON:0000153!7.75e-12!94;UBERON:0002619!1.56e-11!17;UBERON:0007811!7.80e-10!86;UBERON:0000025!4.17e-09!114;UBERON:0002021!6.32e-08!10;UBERON:0000411!6.32e-08!10;UBERON:0001950!6.32e-08!10;UBERON:0004111!1.07e-07!122|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.36e-27,73;UBERON:0001016,3.02e-26,75;UBERON:0004121,6.29e-24,95;UBERON:0000924,6.29e-24,95;UBERON:0006601,6.29e-24,95;UBERON:0002346,1.97e-21,64;UBERON:0003075,1.97e-21,64;UBERON:0007284,1.97e-21,64;UBERON:0000073,3.91e-21,54;UBERON:0000955,1.20e-20,47;UBERON:0006238,1.20e-20,47;UBERON:0001049,2.19e-20,52;UBERON:0005068,2.19e-20,52;UBERON:0006241,2.19e-20,52;UBERON:0007135,2.19e-20,52;UBERON:0002616,5.20e-20,46;UBERON:0010371,3.61e-19,73;UBERON:0003056,1.72e-17,49;UBERON:0010314,3.54e-17,92;UBERON:0003080,7.30e-17,40;UBERON:0003528,2.31e-16,29;UBERON:0002791,2.31e-16,29;UBERON:0001893,2.31e-16,29;UBERON:0002780,2.77e-16,39;UBERON:0001890,2.77e-16,39;UBERON:0006240,2.77e-16,39;UBERON:0002020,5.61e-16,34;UBERON:0000956,1.05e-13,21;UBERON:0001869,1.05e-13,21;UBERON:0000203,1.05e-13,21;UBERON:0002619,1.56e-11,17;UBERON:0000025,4.17e-09,114;UBERON:0002021,6.32e-08,10;UBERON:0000411,6.32e-08,10;UBERON:0001950,6.32e-08,10;UBERON:0004111,1.07e-07,122|phase1_expression=15.8547358633746,0.697950815278722,0.454999239389536,0.30246421130683,0,4.02910252588535,1.63528848416868,13.8161956082487,7.88416844049334,7.0219357896598,7.53359060192222,10.2906085103984,16.2640693434645,13.5501623749446,4.99664642723494,4.25198061518635,4.19737126876888,13.7226041930833,12.8887567589394,13.580468857537,18.9646537036886,1.88652807281682,1.30599894569468,3.03985603307473,2.98232065387321,1.14846392823004,1.7230479846363,1.29282739611533,3.23039813075836,3.52842181663903,1.99557459589774,12.7006134691926,13.5314253268605,0,5.19932915552294,3.49092755252834,5.3084032628216,22.600708059793,8.5946887897618,9.42342739152837,25.8821854733646,23.2235464885872,23.3044969454954,37.1395613027953,35.1777951331715,28.816840089384,79.021525779152,31.6136476751647,35.1497892375155,37.3305406222624,24.4976237844384,50.3133975277401,7.3824346665404,7.97898356212479,12.7715643674136,27.2695002198104,26.3610764743656,17.0171790451556,37.8331781807448,38.0873505075864,36.7622214033584,35.5786758672589,32.9039074561122,46.7947852986327,48.4544517657817,68.9165711497717,27.5632101676932,36.1165207002261,40.8537072495402,37.9366686712051,42.4856421929792,27.4224945027651,19.8781686856452,42.0143441307292,42.3636981900605,51.4762520501612,30.8324466798288,31.1557104927858,29.7996674517112,43.2587023755036,35.6801810049398,32.8175423450759,22.3346399201105,25.3243174514256,28.4204740864867,24.7488011797881,21.6404954814636,24.0455285114638,11.2074766133112,23.1248973926764,18.2614627882057,6.88339101585109,2.719885334831,6.47643829965381,19.4932925234301,12.5447528387254,10.3928870897496,44.4823141928731,29.8753905293299,31.4472221314203,16.4786801138716,20.5322363862909,25.4805239706646,14.2213340630666,7.36069539438128,6.58735650235256,8.08839112023653,9.1347103775248,43.760502336372,22.2663208597237,19.7773272513395,18.5723941770406,16.1430848079241,11.4549206819993,19.9900802130698,22.3686532566822,10.3821886448437,28.6306726701425,18.5768215909474,21.0296904931632,18.3298460322127,10.1823803158397,3.7278352243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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:13712 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P41969,uniprot:C7C6A8 | |||
|association_with_transcript=6bp_to_NM_007922,uc009suc.1,uc009sud.1_5end | |||
|cluster_id=chrX:20527671..20527719,- | |||
|description=CAGE_peak_1_at_Elk1_5end | |||
|id=chrX:20527671..20527719,- | |||
|ontology_enrichment_celltype=CL:0000055!2.08e-12!50;CL:0002319!6.71e-12!43;CL:0000221!1.64e-11!44;CL:0000133!1.64e-11!44;CL:0000393!1.37e-10!39;CL:0000211!1.37e-10!39;CL:0000540!2.59e-09!33;CL:0000047!2.59e-09!33;CL:0000031!2.59e-09!33;CL:0000404!2.59e-09!33;CL:0000117!3.75e-08!23;CL:0000337!3.75e-08!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,6.71e-12,43;CL:0000221,1.64e-11,44;CL:0000133,1.64e-11,44;CL:0000393,1.37e-10,39;CL:0000211,1.37e-10,39;CL:0000540,2.59e-09,33;CL:0000047,2.59e-09,33;CL:0000031,2.59e-09,33;CL:0000404,2.59e-09,33;CL:0000117,3.75e-08,23;CL:0000337,3.75e-08,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.36e-27!73;UBERON:0005743!5.36e-27!73;UBERON:0000073!3.02e-26!75;UBERON:0001016!3.02e-26!75;UBERON:0004121!1.62e-22!102;UBERON:0000924!1.62e-22!102;UBERON:0006601!1.62e-22!102;UBERON:0000955!8.70e-22!50;UBERON:0006238!8.70e-22!50;UBERON:0002616!3.83e-21!49;UBERON:0001049!2.19e-20!52;UBERON:0005068!2.19e-20!52;UBERON:0006241!2.19e-20!52;UBERON:0007135!2.19e-20!52;UBERON:0000033!4.47e-20!63;UBERON:0002346!1.80e-19!71;UBERON:0003075!1.80e-19!71;UBERON:0007284!1.80e-19!71;UBERON:0003056!1.72e-17!49;UBERON:0003080!7.30e-17!40;UBERON:0002791!2.31e-16!29;UBERON:0003528!2.31e-16!29;UBERON:0001893!2.31e-16!29;UBERON:0002780!2.77e-16!39;UBERON:0001890!2.77e-16!39;UBERON:0006240!2.77e-16!39;UBERON:0002020!5.61e-16!34;UBERON:0000956!1.05e-13!21;UBERON:0001869!1.05e-13!21;UBERON:0000203!1.05e-13!21;UBERON:0000153!7.75e-12!94;UBERON:0002619!1.56e-11!17;UBERON:0007811!7.80e-10!86;UBERON:0000025!4.17e-09!114;UBERON:0002021!6.32e-08!10;UBERON:0000411!6.32e-08!10;UBERON:0001950!6.32e-08!10;UBERON:0004111!1.07e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.36e-27,73;UBERON:0001016,3.02e-26,75;UBERON:0004121,6.29e-24,95;UBERON:0000924,6.29e-24,95;UBERON:0006601,6.29e-24,95;UBERON:0002346,1.97e-21,64;UBERON:0003075,1.97e-21,64;UBERON:0007284,1.97e-21,64;UBERON:0000073,3.91e-21,54;UBERON:0000955,1.20e-20,47;UBERON:0006238,1.20e-20,47;UBERON:0001049,2.19e-20,52;UBERON:0005068,2.19e-20,52;UBERON:0006241,2.19e-20,52;UBERON:0007135,2.19e-20,52;UBERON:0002616,5.20e-20,46;UBERON:0010371,3.61e-19,73;UBERON:0003056,1.72e-17,49;UBERON:0010314,3.54e-17,92;UBERON:0003080,7.30e-17,40;UBERON:0003528,2.31e-16,29;UBERON:0002791,2.31e-16,29;UBERON:0001893,2.31e-16,29;UBERON:0002780,2.77e-16,39;UBERON:0001890,2.77e-16,39;UBERON:0006240,2.77e-16,39;UBERON:0002020,5.61e-16,34;UBERON:0000956,1.05e-13,21;UBERON:0001869,1.05e-13,21;UBERON:0000203,1.05e-13,21;UBERON:0002619,1.56e-11,17;UBERON:0000025,4.17e-09,114;UBERON:0002021,6.32e-08,10;UBERON:0000411,6.32e-08,10;UBERON:0001950,6.32e-08,10;UBERON:0004111,1.07e-07,122 | |||
|phase1_expression=15.8547358633746,0.697950815278722,0.454999239389536,0.30246421130683,0,4.02910252588535,1.63528848416868,13.8161956082487,7.88416844049334,7.0219357896598,7.53359060192222,10.2906085103984,16.2640693434645,13.5501623749446,4.99664642723494,4.25198061518635,4.19737126876888,13.7226041930833,12.8887567589394,13.580468857537,18.9646537036886,1.88652807281682,1.30599894569468,3.03985603307473,2.98232065387321,1.14846392823004,1.7230479846363,1.29282739611533,3.23039813075836,3.52842181663903,1.99557459589774,12.7006134691926,13.5314253268605,0,5.19932915552294,3.49092755252834,5.3084032628216,22.600708059793,8.5946887897618,9.42342739152837,25.8821854733646,23.2235464885872,23.3044969454954,37.1395613027953,35.1777951331715,28.816840089384,79.021525779152,31.6136476751647,35.1497892375155,37.3305406222624,24.4976237844384,50.3133975277401,7.3824346665404,7.97898356212479,12.7715643674136,27.2695002198104,26.3610764743656,17.0171790451556,37.8331781807448,38.0873505075864,36.7622214033584,35.5786758672589,32.9039074561122,46.7947852986327,48.4544517657817,68.9165711497717,27.5632101676932,36.1165207002261,40.8537072495402,37.9366686712051,42.4856421929792,27.4224945027651,19.8781686856452,42.0143441307292,42.3636981900605,51.4762520501612,30.8324466798288,31.1557104927858,29.7996674517112,43.2587023755036,35.6801810049398,32.8175423450759,22.3346399201105,25.3243174514256,28.4204740864867,24.7488011797881,21.6404954814636,24.0455285114638,11.2074766133112,23.1248973926764,18.2614627882057,6.88339101585109,2.719885334831,6.47643829965381,19.4932925234301,12.5447528387254,10.3928870897496,44.4823141928731,29.8753905293299,31.4472221314203,16.4786801138716,20.5322363862909,25.4805239706646,14.2213340630666,7.36069539438128,6.58735650235256,8.08839112023653,9.1347103775248,43.760502336372,22.2663208597237,19.7773272513395,18.5723941770406,16.1430848079241,11.4549206819993,19.9900802130698,22.3686532566822,10.3821886448437,28.6306726701425,18.5768215909474,21.0296904931632,18.3298460322127,10.1823803158397,3.72783522436244,67.9251449066789,63.6717988712903,7.15279754584056,5.15205035375457,1.79970819298022,3.93917703926501,46.435098215495,63.1350831889705,59.5601629014977,79.4377143278703,93.591857382901,46.3367339367819,60.8404736504091,21.2844270447161,19.5318943857846,12.8888606801174,16.2040229032585,25.3734863777272,17.012755728077,24.8485739131382,25.4691142142358,30.2762421223409,28.5693596235215,29.3286397871951,26.6464471861186,31.2573589752621,39.9013829154099,30.791446728691,19.5084201860542,23.6340161841758,27.5119211552512,25.516984914585,21.2966665495788,2.80885274925294,4.63226232806487,5.39910648851626,20.5054514810147,22.2799756982041,16.3856475929524,27.2256445922992,19.0861304794982,18.9748548851475,19.5328513590343,20.9253253091703,17.0477399856067,18.4307031903098,20.5209330098869,22.1317850060186,23.0995980132025,23.9309625667245,18.788898626452,95.0510567509855,42.4996049126445,0.991256348951394,7.40461586657924,21.5421133040586,21.3657738111603,20.747661272857,16.1346819698674,16.2335972006755,12.935342575654,6.64340686162316,9.88193728344065,9.55073793441024,15.1206918751275,10.1381325301942,11.6846523125049,8.86166004486246,6.37252074413975,28.8295209448684,19.4222471436539,20.2873924211545,20.9760867680674,19.9771061782655,18.7262639107151,19.9827457312653,15.203845241899,12.2459007716272,11.8461277364928,11.2651998293117,8.3422552858047,10.614185736113,7.87017393346988,8.31726497692862,11.0941493486112,8.14802725700543,13.5217184601881,18.9698215326791,8.23684239564244,8.62609239164127,13.3970741160661,15.9139213288426,11.8712072635143,10.0462551572271,14.473305640901,17.1820466854942,17.8121927064256,21.8373068432315,24.7827825231775,18.3058393665032,25.7959636460396,23.5663204477154,16.7814937157707,25.2216230569906,23.9181864820677,22.8020319180207,16.5501947862895,15.5416483679306,16.6346417368738,34.6819953060326,33.1782467129413,17.7035138286853,13.7968373152366,31.1468144576316,29.8889800810118,32.4591191845817,25.2470927204373,19.5615096038079,23.4263246577983,31.2363926712558,31.0659437338318,32.7514050901119,30.5722653251939,20.2405350837447,27.179794785752,33.994748903401,60.4084074872997,30.0912980641529,22.7923972694087,21.9897395127328,32.9940245945071,14.6019652173959,17.7229864393136,12.3952658355548,10.5618844663303,16.832207894204,13.5271465095328,13.6966995379157,14.9048829085777,10.3384239731569,14.2216541071117,5.27093042874994,8.25084345985495,25.5329704315341,19.8067203434441,24.3194325511578,19.9333442579381,25.0049729435606,22.4744710178609,20.2395295340609,21.312546438022,13.6109590676952,11.0152676849186,12.1290618930229,30.8337293000568,23.0894130175145,21.5920271242798,15.6377770644109,17.5630762727216,10.7847909553045,31.1514507377656,10.423123728669,20.2259130603958,13.3340059706192,5.08594833912666,8.61173634642459,9.60868327467395,9.68877050964975,8.6769900440668,9.25939824489639,17.184071124272,23.8833675153757,23.1784192524607,14.90473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| |||
|short_description=p1@Elk1 | |||
}} |
Revision as of 05:48, 6 August 2015
Short description: | p1@Elk1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Elk1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 6bp_to_NM_007922, uc009suc.1, uc009sud.1_5end |
EntrezGene: | 13712 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 6.71e-12 | 43 |
ectodermal cell | 1.64e-11 | 44 |
neurectodermal cell | 1.64e-11 | 44 |
electrically responsive cell | 1.37e-10 | 39 |
electrically active cell | 1.37e-10 | 39 |
neuron | 2.59e-09 | 33 |
neuronal stem cell | 2.59e-09 | 33 |
neuroblast | 2.59e-09 | 33 |
electrically signaling cell | 2.59e-09 | 33 |
CNS neuron (sensu Vertebrata) | 3.75e-08 | 23 |
neuroblast (sensu Vertebrata) | 3.75e-08 | 23 |