FFCP PHASE1:Mm9::chr11:59661542..59661604,+: Difference between revisions
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{{FFCP|EntrezGene=103850|HGNC=|MCL_coexpression_id=347|UniProt=Q8VCE6|association_with_transcript=0bp_to_ENSMUST00000102695,NM_134029,uc007jfd.1_5end|description=CAGE_peak_1_at_Nt5m_5end|id=chr11:59661542..59661604,+|ontology_enrichment_celltype=CL:0000117!1.94e-11!23;CL:0000337!1.94e-11!23;CL:0000221!1.33e-10!44;CL:0000133!1.33e-10!44;CL:0002319!3.20e-10!43;CL:0000055!1.88e-08!50;CL:0000540!1.19e-07!33;CL:0000047!1.19e-07!33;CL:0000031!1.19e-07!33;CL:0000404!1.19e-07!33|ontology_enrichment_celltype_v019_2=CL:0000117,1.94e-11,23;CL:0000337,1.94e-11,23;CL:0000221,1.33e-10,44;CL:0000133,1.33e-10,44;CL:0002319,3.20e-10,43;CL:0000540,1.19e-07,33;CL:0000047,1.19e-07,33;CL:0000031,1.19e-07,33;CL:0000404,1.19e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.06e-25!73;UBERON:0005743!1.06e-25!73;UBERON:0000073!1.44e-24!75;UBERON:0001016!1.44e-24!75;UBERON:0001049!1.16e-23!52;UBERON:0005068!1.16e-23!52;UBERON:0006241!1.16e-23!52;UBERON:0007135!1.16e-23!52;UBERON:0002346!2.57e-23!71;UBERON:0003075!2.57e-23!71;UBERON:0007284!2.57e-23!71;UBERON:0004121!5.71e-23!102;UBERON:0000924!5.71e-23!102;UBERON:0006601!5.71e-23!102;UBERON:0000955!1.88e-22!50;UBERON:0006238!1.88e-22!50;UBERON:0000033!4.43e-22!63;UBERON:0002616!4.90e-22!49;UBERON:0002020!3.33e-17!34;UBERON:0003080!3.66e-16!40;UBERON:0003056!6.44e-16!49;UBERON:0002780!1.49e-15!39;UBERON:0001890!1.49e-15!39;UBERON:0006240!1.49e-15!39;UBERON:0002791!3.84e-14!29;UBERON:0003528!3.84e-14!29;UBERON:0001893!3.84e-14!29;UBERON:0007811!3.25e-12!86;UBERON:0000153!2.02e-10!94;UBERON:0000025!2.77e-10!114;UBERON:0004111!4.00e-10!122;UBERON:0000956!6.68e-10!21;UBERON:0001869!6.68e-10!21;UBERON:0000203!6.68e-10!21;UBERON:0002619!6.20e-09!17;UBERON:0003076!2.80e-08!12;UBERON:0003057!2.80e-08!12;UBERON:0000468!5.41e-08!333;UBERON:0000479!1.40e-07!349;UBERON:0002021!2.48e-07!10;UBERON:0000411!2.48e-07!10;UBERON:0001950!2.48e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0010314,2.35e-26,92;UBERON:0001017,1.06e-25,73;UBERON:0000073,2.41e-25,54;UBERON:0001016,1.44e-24,75;UBERON:0001049,1.15e-23,52;UBERON:0005068,1.15e-23,52;UBERON:0006241,1.15e-23,52;UBERON:0007135,1.15e-23,52;UBERON:0002346,2.54e-21,64;UBERON:0003075,2.54e-21,64;UBERON:0007284,2.54e-21,64;UBERON:0004121,9.52e-21,95;UBERON:0000924,9.52e-21,95;UBERON:0006601,9.52e-21,95;UBERON:0000955,2.80e-20,47;UBERON:0006238,2.80e-20,47;UBERON:0002616,7.15e-20,46;UBERON:0010371,9.69e-18,73;UBERON:0002020,3.33e-17,34;UBERON:0003080,3.65e-16,40;UBERON:0003056,6.43e-16,49;UBERON:0002780,1.48e-15,39;UBERON:0001890,1.48e-15,39;UBERON:0006240,1.48e-15,39;UBERON:0003528,3.84e-14,29;UBERON:0002791,3.84e-14,29;UBERON:0001893,3.84e-14,29;UBERON:0000025,2.76e-10,114;UBERON:0004111,4.00e-10,122;UBERON:0000956,6.68e-10,21;UBERON:0001869,6.68e-10,21;UBERON:0000203,6.68e-10,21;UBERON:0002619,6.19e-09,17;UBERON:0003076,2.80e-08,12;UBERON:0003057,2.80e-08,12;UBERON:0000479,1.29e-07,349;UBERON:0002021,2.48e-07,10;UBERON:0000411,2.48e-07,10;UBERON:0001950,2.48e-07,10|phase1_expression=6.72625157840135,3.14077866875425,1.81999695755814,9.37639055051173,8.5152274090879,2.68606835059024,5.84031601488814,2.96983643915625,0.563154888606667,0.936258105287974,2.56826952338257,2.55270908785077,4.62241970814255,5.24522414513984,4.99664642723494,2.22722794128809,1.39912375625629,3.94327706697797,3.01651753932625,5.09267582157636,5.44277056966847,3.97163804803541,6.26879493933445,1.91990907352088,2.2940928106717,3.44539178469012,2.15380998079537,2.37018355954478,2.66032787238923,4.78857246543868,3.10422714917427,5.08024538767705,1.84519436275371,0,4.62162591602039,3.65716219788683,5.10423390655923,0.418531630736908,0.7813353445238,0.523523743973798,0,2.73218193983378,0.971020706062307,3.14742044938943,4.46058497365864,5.13930906052708,15.6478268869608,15.6978112593922,8.12838876117546,11.0825042472342,7.27929392451885,14.3752564364972,2.68452169692378,3.62681071005672,4.03312558970957,2.82985379639542,3.15186783932632,4.64104883049698,13.3528864167335,8.99284664762456,13.9442908771359,4.06613438482959,3.55717918444456,8.09909745553259,10.8775299882367,4.2628806896766,14.6804054154018,11.9107674649682,7.25827286159344,6.21027316325777,6.94072372459561,26.5655415495537,17.6694832761291,7.10446635446733,6.42164655822184,5.51531271966013,26.4278114398533,18.386976684267,18.1255709242367,13.3205150607496,12.0763689555181,11.4600941522487,23.7305549151174,18.5711661310454,14.515833538797,15.6153150301044,15.8032565687004,10.2519695203915,3.86203585999239,3.77857800533928,2.02905142091174,7.74381489283248,4.0798280022465,6.47643829965381,1.94932925234301,3.13618820968135,2.80888840263504,2.72688516124892,2.33807404142582,4.94675404314476,9.01397886570755,5.13305909657271,15.2883143823987,0,3.46385665617943,3.29367825117628,2.02209778005913,2.8545969929765,1.8125651855302,7.57054909230606,4.3371331691534,6.69824052286711,10.3776973765226,10.7013074792362,7.52567725668511,7.6656620711102,4.6967043869531,3.4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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:103850 | |||
|HGNC= | |||
|MCL_coexpression_id=347 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8VCE6 | |||
|association_with_transcript=0bp_to_ENSMUST00000102695,NM_134029,uc007jfd.1_5end | |||
|cluster_id=chr11:59661542..59661604,+ | |||
|description=CAGE_peak_1_at_Nt5m_5end | |||
|id=chr11:59661542..59661604,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.94e-11!23;CL:0000337!1.94e-11!23;CL:0000221!1.33e-10!44;CL:0000133!1.33e-10!44;CL:0002319!3.20e-10!43;CL:0000055!1.88e-08!50;CL:0000540!1.19e-07!33;CL:0000047!1.19e-07!33;CL:0000031!1.19e-07!33;CL:0000404!1.19e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.94e-11,23;CL:0000337,1.94e-11,23;CL:0000221,1.33e-10,44;CL:0000133,1.33e-10,44;CL:0002319,3.20e-10,43;CL:0000540,1.19e-07,33;CL:0000047,1.19e-07,33;CL:0000031,1.19e-07,33;CL:0000404,1.19e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.06e-25!73;UBERON:0005743!1.06e-25!73;UBERON:0000073!1.44e-24!75;UBERON:0001016!1.44e-24!75;UBERON:0001049!1.16e-23!52;UBERON:0005068!1.16e-23!52;UBERON:0006241!1.16e-23!52;UBERON:0007135!1.16e-23!52;UBERON:0002346!2.57e-23!71;UBERON:0003075!2.57e-23!71;UBERON:0007284!2.57e-23!71;UBERON:0004121!5.71e-23!102;UBERON:0000924!5.71e-23!102;UBERON:0006601!5.71e-23!102;UBERON:0000955!1.88e-22!50;UBERON:0006238!1.88e-22!50;UBERON:0000033!4.43e-22!63;UBERON:0002616!4.90e-22!49;UBERON:0002020!3.33e-17!34;UBERON:0003080!3.66e-16!40;UBERON:0003056!6.44e-16!49;UBERON:0002780!1.49e-15!39;UBERON:0001890!1.49e-15!39;UBERON:0006240!1.49e-15!39;UBERON:0002791!3.84e-14!29;UBERON:0003528!3.84e-14!29;UBERON:0001893!3.84e-14!29;UBERON:0007811!3.25e-12!86;UBERON:0000153!2.02e-10!94;UBERON:0000025!2.77e-10!114;UBERON:0004111!4.00e-10!122;UBERON:0000956!6.68e-10!21;UBERON:0001869!6.68e-10!21;UBERON:0000203!6.68e-10!21;UBERON:0002619!6.20e-09!17;UBERON:0003076!2.80e-08!12;UBERON:0003057!2.80e-08!12;UBERON:0000468!5.41e-08!333;UBERON:0000479!1.40e-07!349;UBERON:0002021!2.48e-07!10;UBERON:0000411!2.48e-07!10;UBERON:0001950!2.48e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,2.35e-26,92;UBERON:0001017,1.06e-25,73;UBERON:0000073,2.41e-25,54;UBERON:0001016,1.44e-24,75;UBERON:0001049,1.15e-23,52;UBERON:0005068,1.15e-23,52;UBERON:0006241,1.15e-23,52;UBERON:0007135,1.15e-23,52;UBERON:0002346,2.54e-21,64;UBERON:0003075,2.54e-21,64;UBERON:0007284,2.54e-21,64;UBERON:0004121,9.52e-21,95;UBERON:0000924,9.52e-21,95;UBERON:0006601,9.52e-21,95;UBERON:0000955,2.80e-20,47;UBERON:0006238,2.80e-20,47;UBERON:0002616,7.15e-20,46;UBERON:0010371,9.69e-18,73;UBERON:0002020,3.33e-17,34;UBERON:0003080,3.65e-16,40;UBERON:0003056,6.43e-16,49;UBERON:0002780,1.48e-15,39;UBERON:0001890,1.48e-15,39;UBERON:0006240,1.48e-15,39;UBERON:0003528,3.84e-14,29;UBERON:0002791,3.84e-14,29;UBERON:0001893,3.84e-14,29;UBERON:0000025,2.76e-10,114;UBERON:0004111,4.00e-10,122;UBERON:0000956,6.68e-10,21;UBERON:0001869,6.68e-10,21;UBERON:0000203,6.68e-10,21;UBERON:0002619,6.19e-09,17;UBERON:0003076,2.80e-08,12;UBERON:0003057,2.80e-08,12;UBERON:0000479,1.29e-07,349;UBERON:0002021,2.48e-07,10;UBERON:0000411,2.48e-07,10;UBERON:0001950,2.48e-07,10 | |||
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| |||
|short_description=p1@Nt5m | |||
}} |
Revision as of 05:14, 6 August 2015
Short description: | p1@Nt5m |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Nt5m_5end |
Coexpression cluster: | MCL_coexpression_mm9:347 |
Association with transcript: | 0bp_to_ENSMUST00000102695, NM_134029, uc007jfd.1_5end |
EntrezGene: | 103850 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.94e-11 | 23 |
neuroblast (sensu Vertebrata) | 1.94e-11 | 23 |
ectodermal cell | 1.33e-10 | 44 |
neurectodermal cell | 1.33e-10 | 44 |
neural cell | 3.20e-10 | 43 |
neuron | 1.19e-07 | 33 |
neuronal stem cell | 1.19e-07 | 33 |
neuroblast | 1.19e-07 | 33 |
electrically signaling cell | 1.19e-07 | 33 |