FFCP PHASE1:Mm9::chr5:121161622..121161701,-: Difference between revisions
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{{FFCP|EntrezGene=14357|HGNC=|UniProt=Q61010,Q5DTK6|association_with_transcript=0bp_to_NM_008052,uc008zhu.1_5end|description=CAGE_peak_1_at_Dtx1_5end|id=chr5:121161622..121161701,-|ontology_enrichment_celltype=CL:0000117!6.42e-13!23;CL:0000337!6.42e-13!23;CL:0000540!8.60e-07!33;CL:0000047!8.60e-07!33;CL:0000031!8.60e-07!33;CL:0000404!8.60e-07!33;CL:0002319!9.11e-07!43|ontology_enrichment_celltype_v019_2=CL:0000117,4.55e-13,23;CL:0000337,4.55e-13,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.12e-20!52;UBERON:0005068!1.12e-20!52;UBERON:0006241!1.12e-20!52;UBERON:0007135!1.12e-20!52;UBERON:0007811!6.07e-20!86;UBERON:0002346!8.21e-20!71;UBERON:0003075!8.21e-20!71;UBERON:0007284!8.21e-20!71;UBERON:0000033!2.72e-19!63;UBERON:0001017!4.76e-19!73;UBERON:0005743!4.76e-19!73;UBERON:0000955!6.00e-19!50;UBERON:0006238!6.00e-19!50;UBERON:0000153!8.92e-19!94;UBERON:0002616!1.38e-18!49;UBERON:0000073!1.56e-17!75;UBERON:0001016!1.56e-17!75;UBERON:0003056!2.43e-16!49;UBERON:0004121!3.41e-16!102;UBERON:0000924!3.41e-16!102;UBERON:0006601!3.41e-16!102;UBERON:0002020!3.68e-16!34;UBERON:0003080!1.74e-14!40;UBERON:0002780!6.74e-14!39;UBERON:0001890!6.74e-14!39;UBERON:0006240!6.74e-14!39;UBERON:0002791!2.92e-13!29;UBERON:0003528!2.92e-13!29;UBERON:0001893!2.92e-13!29;UBERON:0000956!2.99e-09!21;UBERON:0001869!2.99e-09!21;UBERON:0000203!2.99e-09!21;UBERON:0002619!1.93e-07!17;UBERON:0003076!5.00e-07!12;UBERON:0003057!5.00e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.69e-22,54;UBERON:0001049,6.26e-21,52;UBERON:0005068,6.26e-21,52;UBERON:0006241,6.26e-21,52;UBERON:0007135,6.26e-21,52;UBERON:0002346,8.12e-21,64;UBERON:0003075,8.12e-21,64;UBERON:0007284,8.12e-21,64;UBERON:0001017,8.16e-19,73;UBERON:0000955,1.28e-17,47;UBERON:0006238,1.28e-17,47;UBERON:0002616,2.94e-17,46;UBERON:0001016,3.25e-17,75;UBERON:0010371,1.53e-16,73;UBERON:0003056,1.55e-16,49;UBERON:0002020,2.37e-16,34;UBERON:0004121,4.58e-16,95;UBERON:0000924,4.58e-16,95;UBERON:0006601,4.58e-16,95;UBERON:0003080,1.18e-14,40;UBERON:0002780,4.64e-14,39;UBERON:0001890,4.64e-14,39;UBERON:0006240,4.64e-14,39;UBERON:0003528,2.05e-13,29;UBERON:0002791,2.05e-13,29;UBERON:0001893,2.05e-13,29;UBERON:0000956,2.37e-09,21;UBERON:0001869,2.37e-09,21;UBERON:0000203,2.37e-09,21;UBERON:0010314,2.50e-09,92;UBERON:0002619,1.61e-07,17;UBERON:0003076,4.24e-07,12;UBERON:0003057,4.24e-07,12|phase1_expression=3.36312578920067,0.697950815278722,0,0,0,0.16787927191189,0,72.9546777444906,6.335492496825,10.2988391581677,0.171217968225505,0.478632953972018,87.6547737247773,96.8618058802491,14.6568295198892,15.7930708564064,5.59649502502517,79.8119278356341,83.3655756322892,77.6633062790395,15.90309525825,0,0,2.07990149631429,1.83527424853736,0,0,0,2.47030445293286,4.28451220591882,0.221730510655305,0,0,15.8481681015439,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,11.7358701652206,13.9536100083486,13.1811709640683,7.77719596297134,7.97922603264566,8.62515386189829,104.360780967912,73.2615763431458,94.4423575590324,0,0,0,56.0416596581086,62.9499265333719,43.7343668419264,1.0165335962074,0,0,0.988866362566974,0,11.085204089181,35.348084089583,40.4389488003063,45.2269893411164,37.437843120546,45.4185065202048,39.977205912242,41.8918533315143,37.3797336971122,34.0110951045708,50.6533052597188,37.41239005896,36.2511418484735,54.8646956957606,63.7668875908795,50.007683573449,35.177057874174,37.1423322620909,35.1435969886663,56.2740598254705,51.111433406878,61.3254176765239,0.151452386666368,0.151143120213571,4.92769630792852,0.860423876981386,0,0.539703191637817,0,0,9.12888730856387,0,0.259786004602869,0,1.69012103732017,0,0,0,0,0,0,6.2801133845483,29.0010429684832,7.27366481417641,4.8575891494518,7.61163695780353,3.68984795609694,6.0289056221049,6.58496759959947,4.14699751387929,9.88779870937496,2.89198713839823,0,1.29413479957927,2.65009822152472,1.93950101254089,5.59175283654366,50.0655162889746,47.5444024466543,8.9409969323007,0,0,0,54.6735833827603,30.652540388848,100.523481690292,35.807809959609,42.7044813741652,47.7912502486988,40.8847982930749,6.72139801412087,3.98102305952298,1.26361379216837,3.78795340595653,7.93734702072493,12.8745178482745,23.5881390045007,22.1536082218501,45.856600427995,32.412771232067,31.5774811766286,10.8655415710387,2.37124792226126,3.78212160335639,5.10258260075452,4.16471891612392,3.05851974148158,2.43776516565517,2.67516777330327,2.18937693500343,0,0,0,0.621377317606506,0.234526059981096,0.36012412292203,1.89395788468168,0.787056926989615,0.925602677324269,1.16266972375204,1.3413670069981,1.05088808130453,0.658239399653922,1.14917224855367,1.94565142910054,1.90059983652932,0.878200461164203,1.20785776884335,39.5345103300559,74.2971301378434,20.8163833279793,2.11560453330835,0.853153002140936,2.09013004674395,3.8660238396628,3.02525286935014,2.89091456998331,4.37518940058886,4.74529061544512,3.29397909448022,3.01602250560323,3.78017296878187,4.28920991662064,5.39291645192533,4.32276099749388,2.58883655230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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:14357 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q61010,uniprot:Q5DTK6 | |||
|association_with_transcript=0bp_to_NM_008052,uc008zhu.1_5end | |||
|cluster_id=chr5:121161622..121161701,- | |||
|description=CAGE_peak_1_at_Dtx1_5end | |||
|id=chr5:121161622..121161701,- | |||
|ontology_enrichment_celltype=CL:0000117!6.42e-13!23;CL:0000337!6.42e-13!23;CL:0000540!8.60e-07!33;CL:0000047!8.60e-07!33;CL:0000031!8.60e-07!33;CL:0000404!8.60e-07!33;CL:0002319!9.11e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.55e-13,23;CL:0000337,4.55e-13,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.12e-20!52;UBERON:0005068!1.12e-20!52;UBERON:0006241!1.12e-20!52;UBERON:0007135!1.12e-20!52;UBERON:0007811!6.07e-20!86;UBERON:0002346!8.21e-20!71;UBERON:0003075!8.21e-20!71;UBERON:0007284!8.21e-20!71;UBERON:0000033!2.72e-19!63;UBERON:0001017!4.76e-19!73;UBERON:0005743!4.76e-19!73;UBERON:0000955!6.00e-19!50;UBERON:0006238!6.00e-19!50;UBERON:0000153!8.92e-19!94;UBERON:0002616!1.38e-18!49;UBERON:0000073!1.56e-17!75;UBERON:0001016!1.56e-17!75;UBERON:0003056!2.43e-16!49;UBERON:0004121!3.41e-16!102;UBERON:0000924!3.41e-16!102;UBERON:0006601!3.41e-16!102;UBERON:0002020!3.68e-16!34;UBERON:0003080!1.74e-14!40;UBERON:0002780!6.74e-14!39;UBERON:0001890!6.74e-14!39;UBERON:0006240!6.74e-14!39;UBERON:0002791!2.92e-13!29;UBERON:0003528!2.92e-13!29;UBERON:0001893!2.92e-13!29;UBERON:0000956!2.99e-09!21;UBERON:0001869!2.99e-09!21;UBERON:0000203!2.99e-09!21;UBERON:0002619!1.93e-07!17;UBERON:0003076!5.00e-07!12;UBERON:0003057!5.00e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.69e-22,54;UBERON:0001049,6.26e-21,52;UBERON:0005068,6.26e-21,52;UBERON:0006241,6.26e-21,52;UBERON:0007135,6.26e-21,52;UBERON:0002346,8.12e-21,64;UBERON:0003075,8.12e-21,64;UBERON:0007284,8.12e-21,64;UBERON:0001017,8.16e-19,73;UBERON:0000955,1.28e-17,47;UBERON:0006238,1.28e-17,47;UBERON:0002616,2.94e-17,46;UBERON:0001016,3.25e-17,75;UBERON:0010371,1.53e-16,73;UBERON:0003056,1.55e-16,49;UBERON:0002020,2.37e-16,34;UBERON:0004121,4.58e-16,95;UBERON:0000924,4.58e-16,95;UBERON:0006601,4.58e-16,95;UBERON:0003080,1.18e-14,40;UBERON:0002780,4.64e-14,39;UBERON:0001890,4.64e-14,39;UBERON:0006240,4.64e-14,39;UBERON:0003528,2.05e-13,29;UBERON:0002791,2.05e-13,29;UBERON:0001893,2.05e-13,29;UBERON:0000956,2.37e-09,21;UBERON:0001869,2.37e-09,21;UBERON:0000203,2.37e-09,21;UBERON:0010314,2.50e-09,92;UBERON:0002619,1.61e-07,17;UBERON:0003076,4.24e-07,12;UBERON:0003057,4.24e-07,12 | |||
|phase1_expression=3.36312578920067,0.697950815278722,0,0,0,0.16787927191189,0,72.9546777444906,6.335492496825,10.2988391581677,0.171217968225505,0.478632953972018,87.6547737247773,96.8618058802491,14.6568295198892,15.7930708564064,5.59649502502517,79.8119278356341,83.3655756322892,77.6633062790395,15.90309525825,0,0,2.07990149631429,1.83527424853736,0,0,0,2.47030445293286,4.28451220591882,0.221730510655305,0,0,15.8481681015439,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,11.7358701652206,13.9536100083486,13.1811709640683,7.77719596297134,7.97922603264566,8.62515386189829,104.360780967912,73.2615763431458,94.4423575590324,0,0,0,56.0416596581086,62.9499265333719,43.7343668419264,1.0165335962074,0,0,0.988866362566974,0,11.085204089181,35.348084089583,40.4389488003063,45.2269893411164,37.437843120546,45.4185065202048,39.977205912242,41.8918533315143,37.3797336971122,34.0110951045708,50.6533052597188,37.41239005896,36.2511418484735,54.8646956957606,63.7668875908795,50.007683573449,35.177057874174,37.1423322620909,35.1435969886663,56.2740598254705,51.111433406878,61.3254176765239,0.151452386666368,0.151143120213571,4.92769630792852,0.860423876981386,0,0.539703191637817,0,0,9.12888730856387,0,0.259786004602869,0,1.69012103732017,0,0,0,0,0,0,6.2801133845483,29.0010429684832,7.27366481417641,4.8575891494518,7.61163695780353,3.68984795609694,6.0289056221049,6.58496759959947,4.14699751387929,9.88779870937496,2.89198713839823,0,1.29413479957927,2.65009822152472,1.93950101254089,5.59175283654366,50.0655162889746,47.5444024466543,8.9409969323007,0,0,0,54.6735833827603,30.652540388848,100.523481690292,35.807809959609,42.7044813741652,47.7912502486988,40.8847982930749,6.72139801412087,3.98102305952298,1.26361379216837,3.78795340595653,7.93734702072493,12.8745178482745,23.5881390045007,22.1536082218501,45.856600427995,32.412771232067,31.5774811766286,10.8655415710387,2.37124792226126,3.78212160335639,5.10258260075452,4.16471891612392,3.05851974148158,2.43776516565517,2.67516777330327,2.18937693500343,0,0,0,0.621377317606506,0.234526059981096,0.36012412292203,1.89395788468168,0.787056926989615,0.925602677324269,1.16266972375204,1.3413670069981,1.05088808130453,0.658239399653922,1.14917224855367,1.94565142910054,1.90059983652932,0.878200461164203,1.20785776884335,39.5345103300559,74.2971301378434,20.8163833279793,2.11560453330835,0.853153002140936,2.09013004674395,3.8660238396628,3.02525286935014,2.89091456998331,4.37518940058886,4.74529061544512,3.29397909448022,3.01602250560323,3.78017296878187,4.28920991662064,5.39291645192533,4.32276099749388,2.58883655230677,5.50036912763937,3.08470984046268,2.25415471346161,3.46207257337034,2.32742984601151,2.17421041659988,0.948548056863859,0.442830443938806,0.470996183524124,0.246794327843601,0,0.166845105716094,0.589676985339609,0.224862112384854,0,0.241177159752417,0,0.287696137450811,0,0,1.43768206527355,0.372140947668503,0.936113019343682,1.01031551178845,0.538192240565737,0,6.83586803616437,1.32643988239339,2.28150967018836,1.69745085775188,0.704070744865506,2.84760637651087,2.38043640886014,1.56106918286239,1.41871629695572,0.8858587585951,2.55127629851979,4.42430949732493,4.14443956478149,2.89298117163023,0,0,2.45882136509518,2.20749397043786,42.7064569367527,45.009287651406,0,1.00988370881749,0.94652465824877,1.17131623288992,2.80050417052639,0,0.668396022247182,0.849229592366497,4.04810701674894,1.46127928955656,1.97643888973262,28.5975971615408,7.09700426041343,9.25941139069727,9.93610452056814,16.1670720513085,30.5313818181915,2.18502572539483,1.209294227859,1.88605079755898,1.47650946440386,3.07435147943927,0.516856586336442,1.81766864738753,1.78248689192361,5.37262488490887,13.7044191147498,22.6898195146011,25.5329704315341,3.78128297465751,6.20921682157222,6.64444808597936,7.98031051390231,8.38333442729732,8.39200005070817,17.9634319977614,10.560226862867,58.4656515584144,1.7642271844397,0.65954501176592,2.9063596805263,2.23157822234177,1.3130957840345,1.64140899745061,6.12109756922687,52.8462110729953,39.6420443451018,1.03193433981611,0.370389054739423,3.57900068308913,14.8996708215917,25.394377225924,0,0,0.138199973804424,1.90934123603023,2.53068794864908,7.1161813494397,4.10420295122845,3.13632444021703,4.58561383866973,2.56242258131159,5.37247462214684,3.66458318777641,4.79575401179634,4.97071450469541,16.3470952218415,6.87776111802302,10.2584264083401,18.2784117043405,18.2115351103601,19.767866682421,35.9113150256007,39.191519838029,63.3350440331293,34.5465292781189,27.0748205882394,5.37218905067903,18.6507198066951,29.0672008776461,27.1534520023592,25.2427640891149,20.0668168329078,28.9671033343125,23.6303243479324,15.044001042274,13.10757074466,14.1156659191577,13.2542717806063,13.8545051962074,5.14258369598903,2.0405734525369,1.33191572024439,1.34570784914214,1.67884616364078,10.0458588896739,11.8239959534245,7.69236821922513,1.2862102744744,2.50786052017682,32.7556068717899,39.5879703396172,33.227939779485,29.5587473631143,26.718218271055,42.3020582538232,29.0259675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| |||
|short_description=p1@Dtx1 | |||
}} |
Revision as of 04:37, 6 August 2015
Short description: | p1@Dtx1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Dtx1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_008052, uc008zhu.1_5end |
EntrezGene: | 14357 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.55e-13 | 23 |
neuroblast (sensu Vertebrata) | 4.55e-13 | 23 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 6.69e-22 | 54 |
neural tube | 6.26e-21 | 52 |
neural rod | 6.26e-21 | 52 |
future spinal cord | 6.26e-21 | 52 |
neural keel | 6.26e-21 | 52 |
neurectoderm | 8.12e-21 | 64 |
neural plate | 8.12e-21 | 64 |
presumptive neural plate | 8.12e-21 | 64 |
central nervous system | 8.16e-19 | 73 |
brain | 1.28e-17 | 47 |
future brain | 1.28e-17 | 47 |
regional part of brain | 2.94e-17 | 46 |
nervous system | 3.25e-17 | 75 |
ecto-epithelium | 1.53e-16 | 73 |
pre-chordal neural plate | 1.55e-16 | 49 |
gray matter | 2.37e-16 | 34 |
ectoderm-derived structure | 4.58e-16 | 95 |
ectoderm | 4.58e-16 | 95 |
presumptive ectoderm | 4.58e-16 | 95 |
anterior neural tube | 1.18e-14 | 40 |
regional part of forebrain | 4.64e-14 | 39 |
forebrain | 4.64e-14 | 39 |
future forebrain | 4.64e-14 | 39 |
brain grey matter | 2.05e-13 | 29 |
regional part of telencephalon | 2.05e-13 | 29 |
telencephalon | 2.05e-13 | 29 |
cerebral cortex | 2.37e-09 | 21 |
cerebral hemisphere | 2.37e-09 | 21 |
pallium | 2.37e-09 | 21 |
structure with developmental contribution from neural crest | 2.50e-09 | 92 |
regional part of cerebral cortex | 1.61e-07 | 17 |
posterior neural tube | 4.24e-07 | 12 |
chordal neural plate | 4.24e-07 | 12 |