Personal tools

FFCP PHASE1:Mm9::chr11:58816476..58816483,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
Line 1: Line 1:
{{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=19|UniProt=|association_with_transcript=64bp_to_ENSMUST00000101162,ENSMUST00000162526_5end|description=CAGE_peak_3_at_ENSMUST00000101162_5end,CAGE_peak_3_at_ENSMUST00000162526_5end|id=chr11:58816476..58816483,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!3.89e-59!18;UBERON:0000948!3.89e-59!18;UBERON:0005498!3.89e-59!18;UBERON:0004140!3.89e-59!18;UBERON:0009881!3.89e-59!18;UBERON:0004141!3.89e-59!18;UBERON:0003084!3.89e-59!18;UBERON:0007005!3.89e-59!18;UBERON:0004139!3.89e-59!18;UBERON:0004291!3.89e-59!18;UBERON:0004535!5.84e-46!23;UBERON:0001009!5.84e-46!23;UBERON:0004872!1.46e-31!33;UBERON:0003103!7.65e-24!43;UBERON:0003914!1.14e-21!47;UBERON:0003081!9.66e-11!88;UBERON:0000025!3.48e-09!114;UBERON:0004111!1.89e-08!122|ontology_enrichment_uberon_v019_2=UBERON:0007100,8.31e-53,18;UBERON:0000948,8.31e-53,18;UBERON:0005498,8.31e-53,18;UBERON:0004140,8.31e-53,18;UBERON:0009881,8.31e-53,18;UBERON:0004141,8.31e-53,18;UBERON:0003084,8.31e-53,18;UBERON:0007005,8.31e-53,18;UBERON:0004139,8.31e-53,18;UBERON:0004291,8.31e-53,18;UBERON:0004535,3.06e-41,23;UBERON:0001009,3.06e-41,23;UBERON:0004872,1.34e-28,33;UBERON:0003103,8.03e-22,43;UBERON:0003914,6.49e-20,47;UBERON:0003081,1.95e-10,87;UBERON:0010314,7.96e-10,92;UBERON:0000025,9.12e-08,114;UBERON:0000926,2.47e-07,120;UBERON:0004120,2.47e-07,120;UBERON:0006603,2.47e-07,120;UBERON:0004111,3.37e-07,122|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469052119962192,1.08037236876609,0.473489471170421,2.75469924446365,1.54267112887378,2.32533944750408,1.07309360559848,1.98501082024188,3.12663714835613,1.31333971263276,1.37816976227955,1.46199987425332,1.53685080703735,0.805238512562231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.237270036248348,0,0,0,0,0,0,0,0,0,0|short_description=p3@ENSMUST00000101162,p3@ENSMUST00000162526}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=
|HGNC=
|MCL_coexpression_id=19
|TSSclassifier=NA
|UniProt=
|association_with_transcript=64bp_to_ENSMUST00000101162,ENSMUST00000162526_5end
|cluster_id=chr11:58816476..58816483,+
|description=CAGE_peak_3_at_ENSMUST00000101162_5end,CAGE_peak_3_at_ENSMUST00000162526_5end
|id=chr11:58816476..58816483,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0007100!3.89e-59!18;UBERON:0000948!3.89e-59!18;UBERON:0005498!3.89e-59!18;UBERON:0004140!3.89e-59!18;UBERON:0009881!3.89e-59!18;UBERON:0004141!3.89e-59!18;UBERON:0003084!3.89e-59!18;UBERON:0007005!3.89e-59!18;UBERON:0004139!3.89e-59!18;UBERON:0004291!3.89e-59!18;UBERON:0004535!5.84e-46!23;UBERON:0001009!5.84e-46!23;UBERON:0004872!1.46e-31!33;UBERON:0003103!7.65e-24!43;UBERON:0003914!1.14e-21!47;UBERON:0003081!9.66e-11!88;UBERON:0000025!3.48e-09!114;UBERON:0004111!1.89e-08!122
|ontology_enrichment_uberon_v019_2=UBERON:0007100,8.31e-53,18;UBERON:0000948,8.31e-53,18;UBERON:0005498,8.31e-53,18;UBERON:0004140,8.31e-53,18;UBERON:0009881,8.31e-53,18;UBERON:0004141,8.31e-53,18;UBERON:0003084,8.31e-53,18;UBERON:0007005,8.31e-53,18;UBERON:0004139,8.31e-53,18;UBERON:0004291,8.31e-53,18;UBERON:0004535,3.06e-41,23;UBERON:0001009,3.06e-41,23;UBERON:0004872,1.34e-28,33;UBERON:0003103,8.03e-22,43;UBERON:0003914,6.49e-20,47;UBERON:0003081,1.95e-10,87;UBERON:0010314,7.96e-10,92;UBERON:0000025,9.12e-08,114;UBERON:0000926,2.47e-07,120;UBERON:0004120,2.47e-07,120;UBERON:0006603,2.47e-07,120;UBERON:0004111,3.37e-07,122
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469052119962192,1.08037236876609,0.473489471170421,2.75469924446365,1.54267112887378,2.32533944750408,1.07309360559848,1.98501082024188,3.12663714835613,1.31333971263276,1.37816976227955,1.46199987425332,1.53685080703735,0.805238512562231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.237270036248348,0,0,0,0,0,0,0,0,0,0
|short_description=p3@ENSMUST00000101162,p3@ENSMUST00000162526
}}

Latest revision as of 04:34, 6 August 2015

Short description:p3@ENSMUST00000101162, p3@ENSMUST00000162526
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_ENSMUST00000101162_5end, CAGE_peak_3_at_ENSMUST00000162526_5end
Coexpression cluster:MCL_coexpression_mm9:19
Association with transcript: 64bp_to_ENSMUST00000101162, ENSMUST00000162526_5end
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser


Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression




0.0
0.5
1.0
1.5
2.0
2.5
3.0
3.5




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data