FFCP PHASE1:Mm9::chr5:120953602..120953636,-: Difference between revisions
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{{FFCP|EntrezGene=71772|HGNC=|MCL_coexpression_id=641|UniProt=Q3TCN2|association_with_transcript=0bp_to_ENSMUST00000031597,ENSMUST00000131831,ENSMUST00000151361,NM_023625,uc008zhh.2,uc008zhi.2_5end|description=CAGE_peak_1_at_Plbd2_5end|id=chr5:120953602..120953636,-|ontology_enrichment_celltype=CL:0000333!1.45e-07!10;CL:0000095!1.45e-07!10;CL:0000243!1.45e-07!10;CL:0000123!1.45e-07!10;CL:0000125!1.45e-07!10;CL:0000030!1.45e-07!10;CL:0000339!1.45e-07!10|ontology_enrichment_celltype_v019_2=CL:0000333,1.45e-07,10;CL:0000095,1.45e-07,10;CL:0000243,1.45e-07,10;CL:0000123,1.45e-07,10;CL:0000125,1.45e-07,10;CL:0000030,1.45e-07,10;CL:0000339,1.45e-07,10|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004111!3.55e-08!122;UBERON:0000025!9.07e-08!114;UBERON:0000480!3.01e-07!308;UBERON:0000467!3.01e-07!308;UBERON:0002050!7.55e-07!317;UBERON:0005423!7.55e-07!317|ontology_enrichment_uberon_v019_2=UBERON:0004111,3.55e-08,122;UBERON:0000025,9.07e-08,114|phase1_expression=35.3928952101595,22.6834014965585,30.4849490390989,20.2651021575576,31.0555352566735,21.9921846204576,17.9881733258555,12.9123323441576,19.9919985455367,18.0229685267935,26.7100030431788,36.1367880248874,13.353656934634,13.2004807652686,28.3143297543313,17.2103977281352,18.1886088313318,24.1328556499052,20.1558217400436,20.7950929381035,63.1871645822448,17.6737893137576,10.9703911438353,23.198901305044,25.0056116363215,21.2465826722557,21.1073378117947,19.1769397090441,19.5724122040065,24.6989527164732,20.6209374909433,23.4961349180064,27.0628506537211,15.8481681015439,17.6199488048278,22.9403810594719,23.2753066139101,7.95210098400125,8.5946887897618,3.14114246384279,3.52938892818609,4.09827290975067,5.82612423637384,75.5380907853464,79.8850218009775,82.0453982162716,229.240663893975,95.4950184946356,191.346665161725,158.265937846467,99.9503050405088,129.377307928474,18.456086666351,12.3311564141929,12.7715643674136,63.028561828807,85.960031981627,73.7411091956743,19.624696703381,21.6886301501533,21.5502677192101,137.909724552137,166.298126872783,325.763697655866,303.581973308061,373.002060346703,189.347269847632,204.788356736389,17.0050964185903,13.7706057098324,15.3537221786509,51.4171771926846,43.0693654855646,12.8615339175702,9.68039257284187,14.7075005857603,68.271846219621,58.3531135049308,55.6055650387601,19.5191705840687,18.6634792948916,18.7528813400434,70.0749327493466,64.1549375436115,50.1178252707937,31.2306300602088,32.1759998605973,28.519115211271,69.516645479863,91.2148730488901,58.2627622290372,104.971712991729,129.194553404473,90.6701361951533,143.600588255935,118.727125080794,46.9084363240051,48.2317812895903,52.9963449389852,46.9941634098752,39.0136272781405,48.7640614174408,66.2493623237279,56.8853362522665,22.0820861831438,19.0019899106324,27.8038444758131,48.2997811211624,22.7865337609511,65.6114254666525,31.2273588179045,39.5805121805784,41.5107895060905,34.3647620459979,45.7420070757892,72.8866229712118,64.765081546406,55.670752414166,32.7305904221453,43.8388163357479,40.8556809151728,25.2135131630315,26.0948465705371,39.2326267995473,50.4766563420427,22.9911349687732,17.4930081778644,20.3966928537759,20.7124470129095,61.1145808771677,48.952564501593,23.7486725493314,52.842593338452,47.5630750634415,52.1547991844496,47.536690078853,45.725874368792,41.8007421249913,67.4769765017911,45.4554408714784,19.5180664444056,19.5416788768452,20.5270827978098,19.7423311364787,28.643366142709,22.8042422107033,31.4837794520689,35.7010651619842,21.7723672862171,21.3689870589636,23.4014995138052,33.5369470614189,25.8583941779806,26.8154168222068,25.7227670509929,32.6416197582329,11.2354109970118,11.0659600059328,22.1647529528562,25.2693442493312,25.0942884179773,25.3887506660031,25.0949419720323,26.3664070541521,27.6138132068407,23.2533944750408,28.9735273511589,39.1163896930018,35.7094874312253,36.6093444896382,50.019455489793,50.4389956617396,45.4468738652475,48.4485171724942,46.6843685812362,25.0058208081661,24.1205711578173,19.3048913664387,21.5421133040586,23.2236671860439,23.5827454219431,27.4289593487746,29.3539017875229,39.9473814836374,25.6245693234036,52.8683644664075,53.5343994744574,56.3046815876457,65.5079332720244,20.6728463990471,22.0460810872188,30.2694735346638,24.0878234210414,26.8484004632863,30.4310886317317,23.2162513743658,32.1961128698259,44.3258381706813,54.8893142238553,56.8299069721468,48.5126069029848,67.1280571734595,87.1570723636218,18.1861165230543,17.6903095601883,12.5922782935518,16.6345299538572,26.5294875727659,27.7542178441748,38.5512824184086,57.3958702783625,45.8517560024096,35.9420516318386,74.4281895337007,61.4714216035684,69.96434919135,61.353915424494,102.278026529034,43.2322464989855,21.0335467065238,21.1854469374634,26.6499784667045,23.7037150771387,24.7909261013887,37.3728516191042,50.5396147951699,34.3644614151496,44.5144026194038,52.1417093509983,43.0960517702391,48.6971648861826,45.8537515703392,146.267545421094,153.925308520695,35.8987919303896,35.3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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:71772 | |||
|HGNC= | |||
|MCL_coexpression_id=641 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q3TCN2 | |||
|association_with_transcript=0bp_to_ENSMUST00000031597,ENSMUST00000131831,ENSMUST00000151361,NM_023625,uc008zhh.2,uc008zhi.2_5end | |||
|cluster_id=chr5:120953602..120953636,- | |||
|description=CAGE_peak_1_at_Plbd2_5end | |||
|id=chr5:120953602..120953636,- | |||
|ontology_enrichment_celltype=CL:0000333!1.45e-07!10;CL:0000095!1.45e-07!10;CL:0000243!1.45e-07!10;CL:0000123!1.45e-07!10;CL:0000125!1.45e-07!10;CL:0000030!1.45e-07!10;CL:0000339!1.45e-07!10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000333,1.45e-07,10;CL:0000095,1.45e-07,10;CL:0000243,1.45e-07,10;CL:0000123,1.45e-07,10;CL:0000125,1.45e-07,10;CL:0000030,1.45e-07,10;CL:0000339,1.45e-07,10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004111!3.55e-08!122;UBERON:0000025!9.07e-08!114;UBERON:0000480!3.01e-07!308;UBERON:0000467!3.01e-07!308;UBERON:0002050!7.55e-07!317;UBERON:0005423!7.55e-07!317 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004111,3.55e-08,122;UBERON:0000025,9.07e-08,114 | |||
|phase1_expression=35.3928952101595,22.6834014965585,30.4849490390989,20.2651021575576,31.0555352566735,21.9921846204576,17.9881733258555,12.9123323441576,19.9919985455367,18.0229685267935,26.7100030431788,36.1367880248874,13.353656934634,13.2004807652686,28.3143297543313,17.2103977281352,18.1886088313318,24.1328556499052,20.1558217400436,20.7950929381035,63.1871645822448,17.6737893137576,10.9703911438353,23.198901305044,25.0056116363215,21.2465826722557,21.1073378117947,19.1769397090441,19.5724122040065,24.6989527164732,20.6209374909433,23.4961349180064,27.0628506537211,15.8481681015439,17.6199488048278,22.9403810594719,23.2753066139101,7.95210098400125,8.5946887897618,3.14114246384279,3.52938892818609,4.09827290975067,5.82612423637384,75.5380907853464,79.8850218009775,82.0453982162716,229.240663893975,95.4950184946356,191.346665161725,158.265937846467,99.9503050405088,129.377307928474,18.456086666351,12.3311564141929,12.7715643674136,63.028561828807,85.960031981627,73.7411091956743,19.624696703381,21.6886301501533,21.5502677192101,137.909724552137,166.298126872783,325.763697655866,303.581973308061,373.002060346703,189.347269847632,204.788356736389,17.0050964185903,13.7706057098324,15.3537221786509,51.4171771926846,43.0693654855646,12.8615339175702,9.68039257284187,14.7075005857603,68.271846219621,58.3531135049308,55.6055650387601,19.5191705840687,18.6634792948916,18.7528813400434,70.0749327493466,64.1549375436115,50.1178252707937,31.2306300602088,32.1759998605973,28.519115211271,69.516645479863,91.2148730488901,58.2627622290372,104.971712991729,129.194553404473,90.6701361951533,143.600588255935,118.727125080794,46.9084363240051,48.2317812895903,52.9963449389852,46.9941634098752,39.0136272781405,48.7640614174408,66.2493623237279,56.8853362522665,22.0820861831438,19.0019899106324,27.8038444758131,48.2997811211624,22.7865337609511,65.6114254666525,31.2273588179045,39.5805121805784,41.5107895060905,34.3647620459979,45.7420070757892,72.8866229712118,64.765081546406,55.670752414166,32.7305904221453,43.8388163357479,40.8556809151728,25.2135131630315,26.0948465705371,39.2326267995473,50.4766563420427,22.9911349687732,17.4930081778644,20.3966928537759,20.7124470129095,61.1145808771677,48.952564501593,23.7486725493314,52.842593338452,47.5630750634415,52.1547991844496,47.536690078853,45.725874368792,41.8007421249913,67.4769765017911,45.4554408714784,19.5180664444056,19.5416788768452,20.5270827978098,19.7423311364787,28.643366142709,22.8042422107033,31.4837794520689,35.7010651619842,21.7723672862171,21.3689870589636,23.4014995138052,33.5369470614189,25.8583941779806,26.8154168222068,25.7227670509929,32.6416197582329,11.2354109970118,11.0659600059328,22.1647529528562,25.2693442493312,25.0942884179773,25.3887506660031,25.0949419720323,26.3664070541521,27.6138132068407,23.2533944750408,28.9735273511589,39.1163896930018,35.7094874312253,36.6093444896382,50.019455489793,50.4389956617396,45.4468738652475,48.4485171724942,46.6843685812362,25.0058208081661,24.1205711578173,19.3048913664387,21.5421133040586,23.2236671860439,23.5827454219431,27.4289593487746,29.3539017875229,39.9473814836374,25.6245693234036,52.8683644664075,53.5343994744574,56.3046815876457,65.5079332720244,20.6728463990471,22.0460810872188,30.2694735346638,24.0878234210414,26.8484004632863,30.4310886317317,23.2162513743658,32.1961128698259,44.3258381706813,54.8893142238553,56.8299069721468,48.5126069029848,67.1280571734595,87.1570723636218,18.1861165230543,17.6903095601883,12.5922782935518,16.6345299538572,26.5294875727659,27.7542178441748,38.5512824184086,57.3958702783625,45.8517560024096,35.9420516318386,74.4281895337007,61.4714216035684,69.96434919135,61.353915424494,102.278026529034,43.2322464989855,21.0335467065238,21.1854469374634,26.6499784667045,23.7037150771387,24.7909261013887,37.3728516191042,50.5396147951699,34.3644614151496,44.5144026194038,52.1417093509983,43.0960517702391,48.6971648861826,45.8537515703392,146.267545421094,153.925308520695,35.8987919303896,35.3199035270058,74.0138219843721,70.2098002687297,37.377167545882,50.2417145136702,26.5026904309656,31.2350995437311,35.7602840236446,39.4298516621711,42.7773454238197,46.7076275801574,35.6233417473907,43.8383786866968,45.0628066859037,26.3483479465882,55.6405134016413,50.3925658378332,49.0289747654264,58.0694832863325,53.0980553359851,28.4053344301328,37.7904446205939,31.3084432394791,40.7516612175466,38.7368286409349,52.2025152199807,41.4428451604356,40.2842037574735,45.8253299006933,56.9260486304993,54.661837921539,22.8094535855038,21.6073312837572,30.6580080565128,33.65091449996,30.8572006537556,38.1709269668431,36.0362355118645,58.1528052808885,52.3317908982074,59.3129798418696,37.2692992712886,36.1100893941841,43.5953952078945,33.0514828606294,40.4672246170633,40.3786613372851,37.6010279252507,84.7393630188029,25.1180194772843,25.5919716274396,22.2233432843654,17.8950034154456,22.1444648908061,35.2318386738045,25.1568076390906,22.2522809194616,23.9085954681653,31.5041303944987,23.88336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| |||
|short_description=p1@Plbd2 | |||
}} |
Revision as of 04:21, 6 August 2015
Short description: | p1@Plbd2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Plbd2_5end |
Coexpression cluster: | MCL_coexpression_mm9:641 |
Association with transcript: | 0bp_to_ENSMUST00000031597, ENSMUST00000131831, ENSMUST00000151361, NM_023625, uc008zhh.2, uc008zhi.2_5end |
EntrezGene: | 71772 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
migratory neural crest cell | 1.45e-07 | 10 |
neuron associated cell | 1.45e-07 | 10 |
glial cell (sensu Vertebrata) | 1.45e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 1.45e-07 | 10 |
glial cell | 1.45e-07 | 10 |
glioblast | 1.45e-07 | 10 |
glioblast (sensu Vertebrata) | 1.45e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
anatomical conduit | 3.55e-08 | 122 |
tube | 9.07e-08 | 114 |