FFCP PHASE1:Mm9::chr13:54860569..54860579,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=42|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:54860569..54860579,-|id=chr13:54860569..54860579,-|ontology_enrichment_celltype=CL:0002610!4.26e-08!3;CL:0000117!2.95e-07!23;CL:0000337!2.95e-07!23|ontology_enrichment_celltype_v019_2=CL:0002611,1.32e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000955!1.02e-20!50;UBERON:0006238!1.02e-20!50;UBERON:0001017!3.29e-20!73;UBERON:0005743!3.29e-20!73;UBERON:0000033!3.78e-20!63;UBERON:0000073!1.70e-19!75;UBERON:0001016!1.70e-19!75;UBERON:0002616!2.80e-19!49;UBERON:0001049!4.66e-18!52;UBERON:0005068!4.66e-18!52;UBERON:0006241!4.66e-18!52;UBERON:0007135!4.66e-18!52;UBERON:0002346!2.51e-17!71;UBERON:0003075!2.51e-17!71;UBERON:0007284!2.51e-17!71;UBERON:0004121!3.06e-16!102;UBERON:0000924!3.06e-16!102;UBERON:0006601!3.06e-16!102;UBERON:0002020!3.79e-13!34;UBERON:0007811!4.01e-13!86;UBERON:0002021!8.81e-12!10;UBERON:0000411!8.81e-12!10;UBERON:0001950!8.81e-12!10;UBERON:0003056!1.21e-11!49;UBERON:0000153!1.72e-11!94;UBERON:0003080!2.56e-10!40;UBERON:0002298!4.22e-10!6;UBERON:0002791!1.10e-09!29;UBERON:0003528!1.10e-09!29;UBERON:0001893!1.10e-09!29;UBERON:0003076!1.19e-09!12;UBERON:0003057!1.19e-09!12;UBERON:0002780!3.28e-09!39;UBERON:0001890!3.28e-09!39;UBERON:0006240!3.28e-09!39;UBERON:0002619!3.25e-08!17;UBERON:0004684!4.26e-08!3;UBERON:0002275!4.26e-08!3;UBERON:0000956!6.40e-08!21;UBERON:0001869!6.40e-08!21;UBERON:0000203!6.40e-08!21;UBERON:0004733!6.69e-07!6;UBERON:0004732!6.69e-07!6;UBERON:0002028!6.69e-07!6;UBERON:0007277!6.69e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0002021,6.49e-12,10;UBERON:0000411,6.49e-12,10;UBERON:0001950,6.49e-12,10;UBERON:0000073,1.59e-11,54;UBERON:0002020,1.73e-09,34;UBERON:0001049,6.85e-09,52;UBERON:0005068,6.85e-09,52;UBERON:0006241,6.85e-09,52;UBERON:0007135,6.85e-09,52;UBERON:0001017,1.47e-08,73;UBERON:0001016,2.47e-08,75;UBERON:0002256,1.32e-07,2;UBERON:0003528,2.51e-07,29;UBERON:0002791,2.51e-07,29;UBERON:0001893,2.51e-07,29;UBERON:0002619,2.79e-07,17;UBERON:0002346,3.03e-07,64;UBERON:0003075,3.03e-07,64;UBERON:0007284,3.03e-07,64;UBERON:0002616,4.23e-07,46;UBERON:0000955,5.93e-07,47;UBERON:0006238,5.93e-07,47|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,1.14260393761521,0,0,0,0,1.10115880999389,0.510749352340751,0.768032666281217,0,0,0,0,1.12552522006336,0.61119299110724,0.883885756421003,0.854230084794618,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.585561594023094,8.16842156572475,0,0,0,0,0.299581278809645,0,0.251308704225729,0.173824320192276,0.767146371990992,0.83115217823824,0.324482526135515,0,0,0,0,0,0,0,0,0.0680364991513279,0,0.0937017245597288,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80275294993896,0.586058432961016,0,0,0,0,0.215423397732799,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0,1.14579102687879,1.03111909406213,0.685082519770642,0,0.675022500231806,0.900642406448441,0,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0.526139422875686,0.135804113845862,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0.231867835620421|short_description=p@chr13:54860569..54860579,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=42 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr13:54860569..54860579,- | |||
|description=CAGE_peak_at_chr13:54860569..54860579,- | |||
|id=chr13:54860569..54860579,- | |||
|ontology_enrichment_celltype=CL:0002610!4.26e-08!3;CL:0000117!2.95e-07!23;CL:0000337!2.95e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002611,1.32e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!1.02e-20!50;UBERON:0006238!1.02e-20!50;UBERON:0001017!3.29e-20!73;UBERON:0005743!3.29e-20!73;UBERON:0000033!3.78e-20!63;UBERON:0000073!1.70e-19!75;UBERON:0001016!1.70e-19!75;UBERON:0002616!2.80e-19!49;UBERON:0001049!4.66e-18!52;UBERON:0005068!4.66e-18!52;UBERON:0006241!4.66e-18!52;UBERON:0007135!4.66e-18!52;UBERON:0002346!2.51e-17!71;UBERON:0003075!2.51e-17!71;UBERON:0007284!2.51e-17!71;UBERON:0004121!3.06e-16!102;UBERON:0000924!3.06e-16!102;UBERON:0006601!3.06e-16!102;UBERON:0002020!3.79e-13!34;UBERON:0007811!4.01e-13!86;UBERON:0002021!8.81e-12!10;UBERON:0000411!8.81e-12!10;UBERON:0001950!8.81e-12!10;UBERON:0003056!1.21e-11!49;UBERON:0000153!1.72e-11!94;UBERON:0003080!2.56e-10!40;UBERON:0002298!4.22e-10!6;UBERON:0002791!1.10e-09!29;UBERON:0003528!1.10e-09!29;UBERON:0001893!1.10e-09!29;UBERON:0003076!1.19e-09!12;UBERON:0003057!1.19e-09!12;UBERON:0002780!3.28e-09!39;UBERON:0001890!3.28e-09!39;UBERON:0006240!3.28e-09!39;UBERON:0002619!3.25e-08!17;UBERON:0004684!4.26e-08!3;UBERON:0002275!4.26e-08!3;UBERON:0000956!6.40e-08!21;UBERON:0001869!6.40e-08!21;UBERON:0000203!6.40e-08!21;UBERON:0004733!6.69e-07!6;UBERON:0004732!6.69e-07!6;UBERON:0002028!6.69e-07!6;UBERON:0007277!6.69e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,6.49e-12,10;UBERON:0000411,6.49e-12,10;UBERON:0001950,6.49e-12,10;UBERON:0000073,1.59e-11,54;UBERON:0002020,1.73e-09,34;UBERON:0001049,6.85e-09,52;UBERON:0005068,6.85e-09,52;UBERON:0006241,6.85e-09,52;UBERON:0007135,6.85e-09,52;UBERON:0001017,1.47e-08,73;UBERON:0001016,2.47e-08,75;UBERON:0002256,1.32e-07,2;UBERON:0003528,2.51e-07,29;UBERON:0002791,2.51e-07,29;UBERON:0001893,2.51e-07,29;UBERON:0002619,2.79e-07,17;UBERON:0002346,3.03e-07,64;UBERON:0003075,3.03e-07,64;UBERON:0007284,3.03e-07,64;UBERON:0002616,4.23e-07,46;UBERON:0000955,5.93e-07,47;UBERON:0006238,5.93e-07,47 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,1.14260393761521,0,0,0,0,1.10115880999389,0.510749352340751,0.768032666281217,0,0,0,0,1.12552522006336,0.61119299110724,0.883885756421003,0.854230084794618,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.585561594023094,8.16842156572475,0,0,0,0,0.299581278809645,0,0.251308704225729,0.173824320192276,0.767146371990992,0.83115217823824,0.324482526135515,0,0,0,0,0,0,0,0,0.0680364991513279,0,0.0937017245597288,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80275294993896,0.586058432961016,0,0,0,0,0.215423397732799,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0,1.14579102687879,1.03111909406213,0.685082519770642,0,0.675022500231806,0.900642406448441,0,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0.526139422875686,0.135804113845862,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0.231867835620421 | |||
|short_description=p@chr13:54860569..54860579,- | |||
}} |
Latest revision as of 03:29, 6 August 2015
Short description: | p@chr13:54860569..54860579, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:54860569..54860579, - |
Coexpression cluster: | MCL_coexpression_mm9:42 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the dorsal spinal cord | 1.32e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
occipital lobe | 6.49e-12 | 10 |
visual cortex | 6.49e-12 | 10 |
neocortex | 6.49e-12 | 10 |
regional part of nervous system | 1.59e-11 | 54 |
gray matter | 1.73e-09 | 34 |
neural tube | 6.85e-09 | 52 |
neural rod | 6.85e-09 | 52 |
future spinal cord | 6.85e-09 | 52 |
neural keel | 6.85e-09 | 52 |
central nervous system | 1.47e-08 | 73 |
nervous system | 2.47e-08 | 75 |
dorsal horn of spinal cord | 1.32e-07 | 2 |
brain grey matter | 2.51e-07 | 29 |
regional part of telencephalon | 2.51e-07 | 29 |
telencephalon | 2.51e-07 | 29 |
regional part of cerebral cortex | 2.79e-07 | 17 |
neurectoderm | 3.03e-07 | 64 |
neural plate | 3.03e-07 | 64 |
presumptive neural plate | 3.03e-07 | 64 |
regional part of brain | 4.23e-07 | 46 |
brain | 5.93e-07 | 47 |
future brain | 5.93e-07 | 47 |