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FFCP PHASE1:Mm9::chrX:146981980..146981995,+: Difference between revisions

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{{FFCP|EntrezGene=11656|HGNC=|MCL_coexpression_id=15|UniProt=A2AFM1|association_with_transcript=-6bp_to_ENSMUST00000112715_5end|description=CAGE_peak_1_at_Alas2_5end|id=chrX:146981980..146981995,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0009569!1.77e-12!66;UBERON:0005177!1.70e-11!85;UBERON:0005172!3.15e-10!49;UBERON:0005173!3.15e-10!49;UBERON:0002417!3.15e-10!49;UBERON:0000916!3.15e-10!49;UBERON:0000466!1.28e-09!79;UBERON:0001048!2.56e-08!147;UBERON:0000926!2.90e-08!193;UBERON:0004120!2.90e-08!193;UBERON:0006603!2.90e-08!193;UBERON:0002107!6.32e-08!22;UBERON:0007499!6.32e-08!22;UBERON:0006925!6.32e-08!22;UBERON:0009497!6.32e-08!22;UBERON:0000015!6.32e-08!22;UBERON:0002423!6.32e-08!22;UBERON:0006235!6.32e-08!22;UBERON:0008835!6.32e-08!22;UBERON:0003894!6.32e-08!22;UBERON:0004161!6.32e-08!22;UBERON:0008836!6.32e-08!22;UBERON:0003914!7.48e-08!47;UBERON:0002100!1.68e-07!98;UBERON:0009854!2.46e-07!23;UBERON:0009856!2.46e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0009569,1.65e-12,66;UBERON:0005177,2.99e-12,79;UBERON:0005172,3.86e-10,49;UBERON:0005173,3.86e-10,49;UBERON:0002417,3.86e-10,49;UBERON:0000916,3.86e-10,49;UBERON:0002100,1.24e-08,90;UBERON:0001048,6.91e-08,134;UBERON:0002107,8.51e-08,22;UBERON:0007499,8.51e-08,22;UBERON:0006925,8.51e-08,22;UBERON:0009497,8.51e-08,22;UBERON:0000015,8.51e-08,22;UBERON:0002423,8.51e-08,22;UBERON:0006235,8.51e-08,22;UBERON:0008835,8.51e-08,22;UBERON:0003894,8.51e-08,22;UBERON:0004161,8.51e-08,22;UBERON:0008836,8.51e-08,22;UBERON:0003914,8.74e-08,47;UBERON:0009854,3.26e-07,23;UBERON:0009856,3.26e-07,23|phase1_expression=0.640595388419176,0,0,0,0,0.16787927191189,0.233612640595526,9.94249590500137,6.61706994112834,4.91535505276186,1.71217968225505,2.87179772383211,2.56801094896809,7.51815460803378,829.110197159185,2050.87198339155,2383.4073187826,151.106377206596,119.70090053781,110.341309467488,46.7738095830884,0,0,0.159992422793407,0,0,0,0.215471232685889,0,0,0.221730510655305,16.5107975099504,24.6025915033828,31.6963362030877,0,0,0,39.7605049200062,9.37602413428561,16.7527598071615,19.4116391050235,14.3439551841274,18.4493934151838,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573066879877513,22.17389996793,13.5552028775931,18.5146842745212,15.2119536841483,0,0,0,0,0.7104801149461,0,0,15.3460626216547,17.010748229793,17.0363218694619,18.2816630018434,12.589506834242,13.35149711443,16.1978846020819,11.9498442259303,1.10115880999389,6.38436690425939,1.53606533256243,13.0567424852892,17.5656275716627,11.9810075228055,24.2889209131201,7.31591393041184,2.90316670775939,6.77645746589436,10.8202477407318,36.3478919359336,0.37863096666592,0,0.579728977403356,86.0423876981386,149.593693415705,274.708924543649,82.521605015854,65.8599524033083,183.139523851804,0,0,0,0.704217098883403,0,0,0,0,0,0,88.6066906619905,0,9.35185476108396,85.528266095705,213.430300296811,254.138277976176,88.1727447232842,59.2647083963952,75.6512879804646,92.4509179326558,165.421664316379,795.264886202937,115.663297712398,490.489012500534,555.667040092964,5.59175283654366,4.9772735491963,13.4045892360611,0.510914110417183,0,0.599902730993408,1.14363204365758,4.34392854273986,0.457500602818626,3.64397621127307,5.38855392596057,9.71718737855256,4.98691306942944,10.3834408363365,10.2857757488819,577.870378483882,2.0217820674694,3.57751155007006,15.2240918266363,25.5191335921155,36.5526123504859,62.9946138553289,7.8241974024027,7.68682321709099,8.62055865949505,8.2785078636485,20.6945273215529,17.0195472151037,20.2343792788541,13.3709396780821,14.7365042089567,34.1287123191723,26.7516777330327,20.1024609486678,0,0,0.852490498186778,97.1419873191504,99.4390494319848,113.6191607819,73.15412329583,58.2422125972315,125.727697003213,107.430682474688,70.2876311667002,67.7238985729583,17.9370236405694,211.776028662033,400.560987966073,635.53134533792,1209.72113525369,735.451174806837,3.99550902271842,7.40913209130848,3.30418782983798,2.64450566663544,23.8882840599462,32.9776074041823,26.1600946483849,20.3700359869576,11.3412802360884,21.6857213768317,9.49058123089023,11.1995289212327,18.3474702424197,18.3039954277859,9.16331209459865,9.88701349519644,7.99710784536369,2.78797782556114,18.9667900953082,42.8431922286483,29.3040112750009,20.9760867680674,15.1282939990748,11.7126819216832,17.2635746349222,33.5075035913697,47.2566170802538,35.0447945537913,27.5700943191048,525.562083005696,720.585276085002,870.216374929384,1211.27778481075,1359.03329520487,1459.00613070754,963.782060460216,683.886386537099,319.864046364115,146.643570657902,234.820937978826,118.262278110418,54.304458758629,88.4429248663027,59.8229966490575,176.624049799274,21.4125295300648,29.0077658066806,34.6279974981384,58.6725620721255,86.2657225825351,198.290352858049,344.215754821157,442.324214361972,493.423328537471,297.702053083528,833.244955329528,805.230070440671,754.634138619746,0,0,15.2446924635901,3.58717770196152,11.3990918891332,20.746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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:11656
|HGNC=
|MCL_coexpression_id=15
|TSSclassifier=NA
|UniProt=uniprot:A2AFM1
|association_with_transcript=-6bp_to_ENSMUST00000112715_5end
|cluster_id=chrX:146981980..146981995,+
|description=CAGE_peak_1_at_Alas2_5end
|id=chrX:146981980..146981995,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0009569!1.77e-12!66;UBERON:0005177!1.70e-11!85;UBERON:0005172!3.15e-10!49;UBERON:0005173!3.15e-10!49;UBERON:0002417!3.15e-10!49;UBERON:0000916!3.15e-10!49;UBERON:0000466!1.28e-09!79;UBERON:0001048!2.56e-08!147;UBERON:0000926!2.90e-08!193;UBERON:0004120!2.90e-08!193;UBERON:0006603!2.90e-08!193;UBERON:0002107!6.32e-08!22;UBERON:0007499!6.32e-08!22;UBERON:0006925!6.32e-08!22;UBERON:0009497!6.32e-08!22;UBERON:0000015!6.32e-08!22;UBERON:0002423!6.32e-08!22;UBERON:0006235!6.32e-08!22;UBERON:0008835!6.32e-08!22;UBERON:0003894!6.32e-08!22;UBERON:0004161!6.32e-08!22;UBERON:0008836!6.32e-08!22;UBERON:0003914!7.48e-08!47;UBERON:0002100!1.68e-07!98;UBERON:0009854!2.46e-07!23;UBERON:0009856!2.46e-07!23
|ontology_enrichment_uberon_v019_2=UBERON:0009569,1.65e-12,66;UBERON:0005177,2.99e-12,79;UBERON:0005172,3.86e-10,49;UBERON:0005173,3.86e-10,49;UBERON:0002417,3.86e-10,49;UBERON:0000916,3.86e-10,49;UBERON:0002100,1.24e-08,90;UBERON:0001048,6.91e-08,134;UBERON:0002107,8.51e-08,22;UBERON:0007499,8.51e-08,22;UBERON:0006925,8.51e-08,22;UBERON:0009497,8.51e-08,22;UBERON:0000015,8.51e-08,22;UBERON:0002423,8.51e-08,22;UBERON:0006235,8.51e-08,22;UBERON:0008835,8.51e-08,22;UBERON:0003894,8.51e-08,22;UBERON:0004161,8.51e-08,22;UBERON:0008836,8.51e-08,22;UBERON:0003914,8.74e-08,47;UBERON:0009854,3.26e-07,23;UBERON:0009856,3.26e-07,23
|phase1_expression=0.640595388419176,0,0,0,0,0.16787927191189,0.233612640595526,9.94249590500137,6.61706994112834,4.91535505276186,1.71217968225505,2.87179772383211,2.56801094896809,7.51815460803378,829.110197159185,2050.87198339155,2383.4073187826,151.106377206596,119.70090053781,110.341309467488,46.7738095830884,0,0,0.159992422793407,0,0,0,0.215471232685889,0,0,0.221730510655305,16.5107975099504,24.6025915033828,31.6963362030877,0,0,0,39.7605049200062,9.37602413428561,16.7527598071615,19.4116391050235,14.3439551841274,18.4493934151838,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573066879877513,22.17389996793,13.5552028775931,18.5146842745212,15.2119536841483,0,0,0,0,0.7104801149461,0,0,15.3460626216547,17.010748229793,17.0363218694619,18.2816630018434,12.589506834242,13.35149711443,16.1978846020819,11.9498442259303,1.10115880999389,6.38436690425939,1.53606533256243,13.0567424852892,17.5656275716627,11.9810075228055,24.2889209131201,7.31591393041184,2.90316670775939,6.77645746589436,10.8202477407318,36.3478919359336,0.37863096666592,0,0.579728977403356,86.0423876981386,149.593693415705,274.708924543649,82.521605015854,65.8599524033083,183.139523851804,0,0,0,0.704217098883403,0,0,0,0,0,0,88.6066906619905,0,9.35185476108396,85.528266095705,213.430300296811,254.138277976176,88.1727447232842,59.2647083963952,75.6512879804646,92.4509179326558,165.421664316379,795.264886202937,115.663297712398,490.489012500534,555.667040092964,5.59175283654366,4.9772735491963,13.4045892360611,0.510914110417183,0,0.599902730993408,1.14363204365758,4.34392854273986,0.457500602818626,3.64397621127307,5.38855392596057,9.71718737855256,4.98691306942944,10.3834408363365,10.2857757488819,577.870378483882,2.0217820674694,3.57751155007006,15.2240918266363,25.5191335921155,36.5526123504859,62.9946138553289,7.8241974024027,7.68682321709099,8.62055865949505,8.2785078636485,20.6945273215529,17.0195472151037,20.2343792788541,13.3709396780821,14.7365042089567,34.1287123191723,26.7516777330327,20.1024609486678,0,0,0.852490498186778,97.1419873191504,99.4390494319848,113.6191607819,73.15412329583,58.2422125972315,125.727697003213,107.430682474688,70.2876311667002,67.7238985729583,17.9370236405694,211.776028662033,400.560987966073,635.53134533792,1209.72113525369,735.451174806837,3.99550902271842,7.40913209130848,3.30418782983798,2.64450566663544,23.8882840599462,32.9776074041823,26.1600946483849,20.3700359869576,11.3412802360884,21.6857213768317,9.49058123089023,11.1995289212327,18.3474702424197,18.3039954277859,9.16331209459865,9.88701349519644,7.99710784536369,2.78797782556114,18.9667900953082,42.8431922286483,29.3040112750009,20.9760867680674,15.1282939990748,11.7126819216832,17.2635746349222,33.5075035913697,47.2566170802538,35.0447945537913,27.5700943191048,525.562083005696,720.585276085002,870.216374929384,1211.27778481075,1359.03329520487,1459.00613070754,963.782060460216,683.886386537099,319.864046364115,146.643570657902,234.820937978826,118.262278110418,54.304458758629,88.4429248663027,59.8229966490575,176.624049799274,21.4125295300648,29.0077658066806,34.6279974981384,58.6725620721255,86.2657225825351,198.290352858049,344.215754821157,442.324214361972,493.423328537471,297.702053083528,833.244955329528,805.230070440671,754.634138619746,0,0,15.2446924635901,3.58717770196152,11.3990918891332,20.74646852682,0,59.0781969658233,0,0,0,0,0.222798674082394,0.566153061577665,0,0.292255857911312,0,6.10510501201433,2.98074178937364,94.908966754647,37.3011136919689,1.15479086080775,9.2921596837974,55.1112044071808,44.4415628738184,47.5284800984863,77.959699720524,32.8955608300002,44.9665230112705,12.3601468022352,18.8943610543902,29.0753817300951,18.9753495434998,42.2855727317566,11.9153862013826,18.9064148732876,35.9617140916057,36.4372959553707,35.645386962097,99.3514314043533,84.2490985482859,86.1635805994316,38.7208318305122,101.679394014634,5.51320995137405,7.4198813823666,17.7610869365496,9.83100676328941,14.8021706563889,9.68431308495861,9.32738677215522,27.999220603587,1169.09856641891,183.890699355231,542.619965193255,1980.88269386133,1430.36839887281,2015.76448412267,0,0.139951452323658,2.62579950228405,0,20.7200075795644,40.8672128924966,30.8895274750352,21.7451827855047,27.7320455957646,9.84509728609191,44.3022522687801,26.699106082371,1.8146096260851,9.94142900939081,20.2929457926309,23.9226473670366,42.6882905379312,49.7795042160762,46.2392168050277,33.2843567216833,29.3393096614385,23.6971980415989,2.20204623293993,7.24752362478018,16.9937703692141,9.16432249821717,43.3831960720951,58.0316907981274,34.2990972661379,22.3783369584352,20.0668168329078,20.9140082164746,33.6732121958036,30.794767234185,24.9196257761849,21.0726726935997,10.622909000633,8.178006539428,10.4020442941596,9.74940649545409,0,0,0,4.63655025677257,27.0262764649702,1.28206136987086,4.71610433973945,8.02515366456581,5.0827665835536,4.60325236507177,2.86447756719698,5.15559547031063,2.74033007908257,3.0215755895588,6.07520250208625,2.2516060161211,2.26571204492102,4.65984280576638,16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|short_description=p1@Alas2
}}

Revision as of 02:01, 6 August 2015

Short description:p1@Alas2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Alas2_5end
Coexpression cluster:MCL_coexpression_mm9:15
Association with transcript: -6bp_to_ENSMUST00000112715_5end
EntrezGene:11656
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p1@Alas2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E99.94
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E76.62
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F24.92
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.71
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F12.87
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E42.57
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E87.52
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A1829.11
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32050.87
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52383.41
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A2151.11
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A4119.70
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A6110.34
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A346.77
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I316.51
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G624.60
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E931.70
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G839.76
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H19.38
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H316.75
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G919.41
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H214.34
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H418.45
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C522.17
Mouse Granule cells, donor1.CNhs12131.11713-123C313.56
Mouse Granule cells, donor2.CNhs12357.11731-123E318.51
Mouse Granule cells, donor3.CNhs12108.11636-122C715.21
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D515.35
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F517.01
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D917.04
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F118.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D512.59
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D213.35
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F216.20
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D611.95
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F36.38
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.54
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D413.06
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F417.57
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D811.98
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E424.29
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E57.32
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.90
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D66.78
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F610.82
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E136.35
Mouse Schwann, donor1.CNhs12507.11728-123D90.38
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F786.04
Mouse hepatocyte, donor1.CNhs13078.11714-123C4149.59
Mouse hepatocyte, donor3.CNhs12615.11637-122C8274.71
Mouse hepatocyte, donor6.CNhs13090.11822-124F482.52
Mouse hepatocyte, donor8.CNhs13091.11824-124F665.86
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A7183.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B688.61
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D79.35
adrenal gland, embryo E14.CNhs11038.406-44C585.53
adrenal gland, embryo E16.CNhs11004.1254-43D6213.43
adrenal gland, embryo E17.CNhs11043.1263-45I1254.14
adrenal gland, embryo E18.CNhs11026.1262-18F588.17
adrenal gland, neonate N00.CNhs11191.1311-23C159.26
adrenal gland, neonate N25.CNhs11223.1377-27I375.65
amnion, adult pregnant day17.5.CNhs10488.583-22A892.45
aorta, adult.CNhs10498.46-23H1165.42
bone (os femoris), adult.CNhs10483.56-12G2795.26
bone (os femoris), neonate N02.CNhs11227.1985-43F5115.66
bone (os femoris), neonate N16.CNhs11225.1525-43A6490.49
bone (os femoris), neonate N20.CNhs11195.1350-25C3555.67
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B24.98
cerebellum, neonate N30.CNhs11135.1395-42I213.40
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.14
corpora quadrigemina, adult.CNhs10501.16-22A44.34
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F13.64
cortex, adult.CNhs10473.12-14D55.39
cortex, neonate N30.CNhs11107.1392-42F29.72
diencephalon, adult.CNhs10482.20-12F24.99
diencephalon, neonate N30.CNhs11201.1388-42B210.38
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B110.29
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A2577.87
epididymis, adult.CNhs10490.58-23B22.02
eyeball, adult.CNhs10484.31-12G43.58
eyeball, embryo E12.CNhs11016.345-16C615.22
eyeball, embryo E14.CNhs10521.399-16E225.52
eyeball, embryo E15.CNhs10593.426-16C936.55
eyeball, embryo E17.CNhs11023.1261-18D462.99
eyeball, neonate N00.CNhs11207.633-15C67.82
eyeball, neonate N01.CNhs11140.1532-43E77.69
eyeball, neonate N02.CNhs11205.1551-44G88.62
eyeball, neonate N16.CNhs11188.777-19A28.28
forelimb, embryo E11.CNhs10596.335-25E220.69
forelimb, embryo E12.CNhs10600.359-14H217.02
forelimb, embryo E13.CNhs10589.384-1E220.23
forelimb, embryo E14.CNhs10577.413-26A813.37
forelimb, embryo E15.CNhs11007.437-20E714.74
forelimb, embryo E17.CNhs10598.1517-43C434.13
forelimb, embryo E18.CNhs11008.1520-43B526.75
gonad, embryo E13.CNhs11044.1564-45I620.10
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.85
heart, embryo E11.CNhs10586.331-24E997.14
heart, embryo E12.CNhs11015.353-12F599.44
heart, embryo E13.CNhs11013.376-3I9113.62
heart, embryo E14.CNhs10597.403-26D473.15
heart, embryo E15.CNhs11017.431-16C858.24
heart, embryo E16.CNhs11021.457-17C6125.73
heart, embryo E17.CNhs11025.479-18E5107.43
heart, embryo E18.CNhs11030.1283-20G370.29
heart, neonate N00.CNhs11213.639-21E367.72
heart, neonate N03.CNhs11221.1349-25I217.94
heart, neonate N10.CNhs11118.749-24G1211.78
heart, neonate N16.CNhs11209.782-15G1400.56
heart, neonate N20.CNhs11127.821-26I6635.53
heart, neonate N25.CNhs11196.1351-25D31209.72
heart, neonate N30.CNhs11202.1390-42D2735.45
hippocampus, adult.CNhs10478.13-16E84.00
hippocampus, neonate N00.CNhs11228.627-43G17.41
intestinal mucosa, adult.CNhs10506.860-29I33.30
intestine, adult.CNhs10496.178-9A32.64
intestine, embryo E12.CNhs11019.1251-16I523.89
intestine, embryo E13.CNhs11010.381-16D532.98
intestine, embryo E15.CNhs10602.976-16D826.16
intestine, embryo E16.CNhs10585.463-22H420.37
intestine, embryo E17.CNhs10582.482-18D311.34
intestine, embryo E18.CNhs10526.1289-20F721.69
intestine, neonate N00.CNhs11126.644-26D19.49
intestine, neonate N01.CNhs11192.1322-23E911.20
intestine, neonate N06.CNhs11102.688-20B818.35
intestine, neonate N07.CNhs11095.720-20F218.30
intestine, neonate N10.CNhs11098.755-23A59.16
intestine, neonate N20.CNhs11187.827-18D19.89
intestine, neonate N25.CNhs11121.1352-25E38.00
intestine, neonate N30.CNhs11131.1384-42G12.79
kidney, embryo E14.CNhs10606.411-4I918.97
kidney, embryo E15.CNhs10997.434-16F842.84
kidney, embryo E16.CNhs10584.464-22A529.30
kidney, embryo E17.CNhs11028.483-18I220.98
kidney, embryo E18.CNhs11001.1288-20C715.13
kidney, neonate N00.CNhs11214.646-21G711.71
kidney, neonate N10.CNhs11206.758-6D517.26
kidney, neonate N20.CNhs11113.832-19I133.51
kidney, neonate N25.CNhs11122.1353-25F347.26
kidney, neonate N30.CNhs11203.1385-42H135.04
liver, adult pregnant day01.CNhs10466.508-5B227.57
liver, embryo E12.CNhs10601.355-15F8525.56
liver, embryo E13.CNhs10524.378-3H6720.59
liver, embryo E14.CNhs10594.409-16E1870.22
liver, embryo E15.CNhs10520.433-16D71211.28
liver, embryo E16.CNhs10523.462-17F51359.03
liver, embryo E17.CNhs10510.481-18A31459.01
liver, embryo E18.CNhs10579.499-43G4963.78
liver, neonate N00.CNhs11117.641-24F4683.89
liver, neonate N03.CNhs11123.1345-25G2319.86
liver, neonate N06.CNhs11101.684-20A8146.64
liver, neonate N07.CNhs11103.716-20H2234.82
liver, neonate N10.CNhs11115.751-24B9118.26
liver, neonate N20.CNhs11220.823-25A354.30
liver, neonate N25.CNhs11198.1368-26H188.44
liver, neonate N30.CNhs11106.1382-42D159.82
lung, adult.CNhs10474.28-22B1176.62
lung, embryo E12.CNhs10522.354-16G221.41
lung, embryo E14.CNhs10604.404-26F829.01
lung, embryo E15.CNhs11020.432-17C534.63
lung, embryo E16.CNhs10998.458-17B658.67
lung, embryo E17.CNhs10605.480-44A686.27
lung, embryo E18.CNhs10583.1287-20I6198.29
lung, neonate N00.CNhs11224.640-42C6344.22
lung, neonate N06.CNhs11212.683-20E5442.32
lung, neonate N07.CNhs11111.715-19A3493.42
lung, neonate N10.CNhs11219.750-23E6297.70
lung, neonate N20.CNhs11109.822-18A4833.24
lung, neonate N25.CNhs11119.1359-25C7805.23
lung, neonate N30.CNhs11133.1394-42H2754.63
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B615.24
mammary gland, adult pregnant day19.CNhs10476.588-5H23.59
medulla oblongata, adult.CNhs10477.17-12C211.40
medulla oblongata, neonate N30.CNhs11200.1396-42A320.75
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C259.08
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I96.11
ovary, adult.CNhs10507.91-2I72.98
ovary, embryo E18.CNhs11040.505-44H794.91
ovary, neonate N00.CNhs11217.1299-22I437.30
oviduct, adult pregnant day01.CNhs10500.988-6G61.15
pancreas, adult.CNhs10486.34-16E49.29
pancreas, embryo E14.CNhs11012.405-44F455.11
pancreas, embryo E15.CNhs11042.1556-45F244.44
pancreas, embryo E16.CNhs11003.460-26E547.53
pancreas, embryo E17.CNhs10599.1558-45G377.96
pancreas, embryo E18.CNhs10580.1535-43I732.90
pancreas, neonate N00.CNhs11105.645-26G944.97
pancreas, neonate N01.CNhs11138.1531-43D712.36
pancreas, neonate N02.CNhs11139.1539-43D818.89
pancreas, neonate N16.CNhs11136.787-43B629.08
pancreas, neonate N25.CNhs11094.1555-45E218.98
pancreas, neonate N30.CNhs11182.1548-44H542.29
pituitary gland, adult.CNhs10493.21-1G811.92
pituitary gland, embryo E12.CNhs11018.346-16E618.91
pituitary gland, embryo E13.CNhs11009.370-44C735.96
pituitary gland, embryo E14.CNhs11037.398-44A536.44
pituitary gland, embryo E15.CNhs10592.427-16B935.65
pituitary gland, embryo E16.CNhs11036.449-43F699.35
pituitary gland, embryo E17.CNhs11039.1265-44F584.25
pituitary gland, neonate N00.CNhs11190.1308-22E986.16
placenta, adult pregnant day10.CNhs10472.539-13I738.72
placenta, adult pregnant day17.CNhs10464.577-18G3101.68
prostate, adult.CNhs10470.859-1F85.51
skin, adult.CNhs10492.30-1C37.42
skin, neonate N00.CNhs11124.650-25G417.76
skin, neonate N03.CNhs11215.662-22H39.83
skin, neonate N06.CNhs11097.693-20I514.80
skin, neonate N10.CNhs11108.762-6C49.68
small intestine, neonate N16.CNhs11114.790-21I19.33
spinal cord, adult.CNhs10505.24-13C928.00
spleen, adult.CNhs10465.25-2G21169.10
spleen, embryo E16.CNhs11035.461-43C1183.89
spleen, embryo E18.CNhs11011.1271-21F2542.62
spleen, neonate N10.CNhs11116.752-24D11980.88
spleen, neonate N20.CNhs11112.824-19H11430.37
spleen, neonate N25.CNhs11099.1354-25G32015.76
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.63
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E320.72
stomach, embryo E15.CNhs10603.1252-16G840.87
stomach, embryo E16.CNhs11022.459-17D430.89
stomach, embryo E17.CNhs11006.1035-18D521.75
stomach, embryo E18.CNhs10999.1286-20C627.73
stomach, neonate N03.CNhs11193.1340-24B89.85
stomach, neonate N07.CNhs11210.718-18A944.30
stomach, neonate N25.CNhs11104.1355-25E426.70
stomach, neonate N30.CNhs11134.1386-42I11.81
submandibular gland, adult.CNhs10469.59-29C19.94
testis, adult.CNhs10504.57-7G520.29
testis, embryo E13.CNhs11031.389-23F523.92
testis, embryo E15.CNhs11034.443-27C542.69
testis, embryo E16.CNhs11033.470-26G549.78
testis, embryo E17.CNhs11029.486-18I546.24
testis, embryo E18.CNhs11027.503-18G533.28
testis, neonate N00.CNhs11189.1300-22B729.34
testis, neonate N07.CNhs11222.726-26I423.70
testis, neonate N10.CNhs11204.763-44D92.20
testis, neonate N20.CNhs11110.839-18H37.25
testis, neonate N30.CNhs11130.1391-42E216.99
thymus, adult.CNhs10471.38-12B59.16
thymus, embryo E14.CNhs11041.402-44I443.38
thymus, embryo E15.CNhs11005.430-45I258.03
thymus, embryo E16.CNhs11002.456-26C534.30
thymus, embryo E17.CNhs10581.478-18C122.38
thymus, embryo E18.CNhs10595.1273-19G420.07
thymus, neonate N02.CNhs11181.1541-43F820.91
thymus, neonate N03.CNhs11137.2104-43C733.67
thymus, neonate N06.CNhs11197.681-26C430.79
thymus, neonate N07.CNhs11211.713-19D324.92
thymus, neonate N10.CNhs11194.748-24E421.07
thymus, neonate N20.CNhs11186.820-7A210.62
thymus, neonate N25.CNhs11125.1362-25G78.18
thymus, neonate N30.CNhs11132.1393-42G210.40
tongue, adult.CNhs10499.32-1B49.75
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E44.64
uterus, adult pregnant day19.CNhs10497.590-15F527.03
uterus, adult.CNhs10509.92-27E51.28
vagina, adult.CNhs10502.89-27D54.72
vesicular gland, adult.CNhs10491.51-27F88.03
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A15.08
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A24.60
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.86
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D75.16
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A66.08
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.25
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.27
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.66
whole body, embryo E11.CNhs11014.324-5I816.61
whole body, embryo E12.CNhs10587.857-27C973.02
whole body, embryo E13.CNhs10512.372-23H2157.07
whole body, embryo E14.5.CNhs10578.420-27D2348.62
whole body, embryo E14.CNhs10519.395-14B1147.15
whole body, embryo E16.CNhs10514.453-14F2143.03
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G5229.58
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G5230.97
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G5203.46
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G5210.75
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G5204.56
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G5238.42
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G5223.33
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G5218.07
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G5208.78
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G5204.33
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G5185.53
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G5202.75
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G5227.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G5253.62
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G5243.09
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G5237.29
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G5217.93
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G5212.06
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G5245.91
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G5221.69
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G5237.44
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G5230.45
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G5208.32
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G5237.36
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G5216.86
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G5197.40
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G5204.21
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G5203.12
whole body, embryo E17.5.CNhs10513.490-9F9250.97
whole body, embryo E17.CNhs10517.475-3I585.19
whole body, embryo E18.CNhs10516.493-3B3141.76
whole body, neonate N00.CNhs10525.657-19C2191.24
whole body, neonate N01.CNhs10576.659-23C656.62
whole body, neonate N06.CNhs10515.692-21D1190.37
whole body, neonate N10.CNhs10518.761-6B4184.80





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
subdivision of trunk1.65e-1266
trunk region element2.99e-1279
abdomen element3.86e-1049
abdominal segment element3.86e-1049
abdominal segment of trunk3.86e-1049
abdomen3.86e-1049
trunk1.24e-0890
primordium6.91e-08134
liver8.51e-0822
epithelial sac8.51e-0822
digestive gland8.51e-0822
epithelium of foregut-midgut junction8.51e-0822
anatomical boundary8.51e-0822
hepatobiliary system8.51e-0822
foregut-midgut junction8.51e-0822
hepatic diverticulum8.51e-0822
liver primordium8.51e-0822
septum transversum8.51e-0822
liver bud8.51e-0822
epithelial tube8.74e-0847
digestive tract diverticulum3.26e-0723
sac3.26e-0723
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