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FFCP PHASE1:Mm9::chr3:135101490..135101504,+: Difference between revisions

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{{FFCP|EntrezGene=66105|HGNC=|UniProt=|association_with_transcript=46bp_to_uc008rlo.1_5end|description=CAGE_peak_3_at_Ube2d3_5end|id=chr3:135101490..135101504,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!1.06e-12!130;UBERON:0000925!1.06e-12!130;UBERON:0006595!1.06e-12!130;UBERON:0001007!4.86e-12!128;UBERON:0001555!4.86e-12!128;UBERON:0007026!4.86e-12!128;UBERON:0004921!1.91e-11!126;UBERON:0004185!1.91e-11!126;UBERON:0003914!7.18e-09!47;UBERON:0000926!4.89e-08!193;UBERON:0004120!4.89e-08!193;UBERON:0006603!4.89e-08!193;UBERON:0000490!1.86e-07!66;UBERON:0007100!2.34e-07!18;UBERON:0000948!2.34e-07!18;UBERON:0005498!2.34e-07!18;UBERON:0004140!2.34e-07!18;UBERON:0009881!2.34e-07!18;UBERON:0004141!2.34e-07!18;UBERON:0003084!2.34e-07!18;UBERON:0007005!2.34e-07!18;UBERON:0004139!2.34e-07!18;UBERON:0004291!2.34e-07!18;UBERON:0003929!3.34e-07!55;UBERON:0005911!6.21e-07!69;UBERON:0003104!7.87e-07!131;UBERON:0009142!7.87e-07!131|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.67e-13,118;UBERON:0000925,2.67e-13,118;UBERON:0006595,2.67e-13,118;UBERON:0001007,1.27e-12,116;UBERON:0001555,1.27e-12,116;UBERON:0007026,1.27e-12,116;UBERON:0004921,5.14e-12,114;UBERON:0003914,7.18e-09,47;UBERON:0000490,1.86e-07,66;UBERON:0007100,2.34e-07,18;UBERON:0000948,2.34e-07,18;UBERON:0005498,2.34e-07,18;UBERON:0004140,2.34e-07,18;UBERON:0009881,2.34e-07,18;UBERON:0004141,2.34e-07,18;UBERON:0003084,2.34e-07,18;UBERON:0007005,2.34e-07,18;UBERON:0004139,2.34e-07,18;UBERON:0004291,2.34e-07,18;UBERON:0003929,3.34e-07,55;UBERON:0005911,6.21e-07,69|phase1_expression=13.2923543096979,39.0852456556084,48.2299193752908,27.5242432289215,33.5600139064053,31.3934238475234,33.1729949645646,39.8991069434471,85.1771769017584,67.4105835807341,77.5617396061538,70.438816392882,35.4385510957596,38.9020790764538,21.3190247562024,15.9955461237963,11.1929900500503,28.7070570475996,22.7609959785526,24.6145998042858,19.1347402839907,21.5461364105921,21.9407822876706,39.1981435843846,32.8055271926053,43.0673973086265,45.2300095967028,42.663304071806,37.2445902134493,27.9753444033523,35.9203427261594,18.4158895303293,17.221814052368,0,18.7753552838328,23.1066157048304,18.9877501324003,33.0639988282157,42.973443948809,35.0760908462445,49.4114449946052,40.2996836125483,39.3263385955234,32.1036885837722,24.5332173551225,20.0065959856233,19.559783608701,7.84890562969608,15.378032791413,18.0819806139084,19.0381533410493,11.5002051491977,37.0799559387597,44.247090662692,41.6756310936655,50.6801088990816,33.2378790328958,38.1597348285307,13.3528864167335,12.6957835025288,13.3104594736298,21.6860500524245,19.5644855144451,20.2477436388315,21.7550599764734,27.7087244828979,16.4780060785123,9.98967593836042,14.6202353354953,7.96535036156975,10.5162480675691,20.2812198926701,14.5773237028065,8.45186514583183,10.1596199279331,6.43453150627015,23.1243350098716,18.5146640223522,23.348193054949,16.2220133908138,14.5465353327831,16.6692278578163,26.2432019061298,16.8828783009504,17.2662019987795,20.6240009831567,17.7964600998879,18.6399445825301,48.4647637332378,37.7857800533928,24.6384815396426,45.6024654800135,39.4383373550495,53.4306159721439,61.7287596575286,57.347441548459,43.8186590811066,28.6322941931137,22.8611684050525,29.3271846843582,13.239281459008,32.0816193535795,25.4805239706646,28.4426681261332,31.1747099056148,28.1229450677359,23.25412447068,37.1097609086945,69.395352817442,33.1025970114559,20.1242979048718,23.748307308347,25.5983201954225,25.3214036128406,23.6353301342767,34.6839792069904,44.0007042567185,51.9111691342483,38.9228642857945,34.2945721888507,23.6300424752621,29.0925151881133,27.9587641827183,24.0080253549469,16.3368431314495,33.9757883427427,22.6450585316189,23.9961092397363,23.507992008517,31.7556155538224,24.7050325522058,15.9581027183338,22.9448102653805,18.6672283851141,24.5189892580281,21.9025705141473,15.2759045775474,19.5318943857846,14.6579199891531,29.8827435358793,22.6409570755104,18.3921683546778,23.9482632641114,17.6324636867787,14.0835553243249,17.1672385181699,13.2119431629218,19.4027528054262,27.8082710883366,25.3402147424878,22.1698416446576,28.7146409480123,27.2486304241086,30.2979384874285,30.4557561883756,18.7092210809384,25.9818879305897,22.9039637332097,18.1864639613179,30.4474885627188,33.5372265772968,31.6909228171386,32.4340287751738,34.2369763240483,34.247299060998,33.7174219888091,35.4120889847497,35.846960106721,41.9627617279375,39.728526307141,45.4796021552251,53.9477953599476,63.6695334344047,54.0851867604298,26.0759536219518,15.4356918568927,57.1624494561971,40.1964861328587,28.1540490706509,28.5651106388339,34.536479634321,37.5131355799417,35.1357309274895,33.669935821923,32.2679761850268,38.3748564506945,26.8928673416288,31.2361661104607,33.5338229844887,39.5480539807857,40.6339533764425,37.438559371821,47.0376394363643,23.4209450849944,27.0498565615393,26.0673699642002,23.4682509472827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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:66105
|HGNC=
|TSSclassifier=NA
|UniProt=
|association_with_transcript=46bp_to_uc008rlo.1_5end
|cluster_id=chr3:135101490..135101504,+
|description=CAGE_peak_3_at_Ube2d3_5end
|id=chr3:135101490..135101504,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.67e-13,118;UBERON:0000925,2.67e-13,118;UBERON:0006595,2.67e-13,118;UBERON:0001007,1.27e-12,116;UBERON:0001555,1.27e-12,116;UBERON:0007026,1.27e-12,116;UBERON:0004921,5.14e-12,114;UBERON:0003914,7.18e-09,47;UBERON:0000490,1.86e-07,66;UBERON:0007100,2.34e-07,18;UBERON:0000948,2.34e-07,18;UBERON:0005498,2.34e-07,18;UBERON:0004140,2.34e-07,18;UBERON:0009881,2.34e-07,18;UBERON:0004141,2.34e-07,18;UBERON:0003084,2.34e-07,18;UBERON:0007005,2.34e-07,18;UBERON:0004139,2.34e-07,18;UBERON:0004291,2.34e-07,18;UBERON:0003929,3.34e-07,55;UBERON:0005911,6.21e-07,69
|phase1_expression=13.2923543096979,39.0852456556084,48.2299193752908,27.5242432289215,33.5600139064053,31.3934238475234,33.1729949645646,39.8991069434471,85.1771769017584,67.4105835807341,77.5617396061538,70.438816392882,35.4385510957596,38.9020790764538,21.3190247562024,15.9955461237963,11.1929900500503,28.7070570475996,22.7609959785526,24.6145998042858,19.1347402839907,21.5461364105921,21.9407822876706,39.1981435843846,32.8055271926053,43.0673973086265,45.2300095967028,42.663304071806,37.2445902134493,27.9753444033523,35.9203427261594,18.4158895303293,17.221814052368,0,18.7753552838328,23.1066157048304,18.9877501324003,33.0639988282157,42.973443948809,35.0760908462445,49.4114449946052,40.2996836125483,39.3263385955234,32.1036885837722,24.5332173551225,20.0065959856233,19.559783608701,7.84890562969608,15.378032791413,18.0819806139084,19.0381533410493,11.5002051491977,37.0799559387597,44.247090662692,41.6756310936655,50.6801088990816,33.2378790328958,38.1597348285307,13.3528864167335,12.6957835025288,13.3104594736298,21.6860500524245,19.5644855144451,20.2477436388315,21.7550599764734,27.7087244828979,16.4780060785123,9.98967593836042,14.6202353354953,7.96535036156975,10.5162480675691,20.2812198926701,14.5773237028065,8.45186514583183,10.1596199279331,6.43453150627015,23.1243350098716,18.5146640223522,23.348193054949,16.2220133908138,14.5465353327831,16.6692278578163,26.2432019061298,16.8828783009504,17.2662019987795,20.6240009831567,17.7964600998879,18.6399445825301,48.4647637332378,37.7857800533928,24.6384815396426,45.6024654800135,39.4383373550495,53.4306159721439,61.7287596575286,57.347441548459,43.8186590811066,28.6322941931137,22.8611684050525,29.3271846843582,13.239281459008,32.0816193535795,25.4805239706646,28.4426681261332,31.1747099056148,28.1229450677359,23.25412447068,37.1097609086945,69.395352817442,33.1025970114559,20.1242979048718,23.748307308347,25.5983201954225,25.3214036128406,23.6353301342767,34.6839792069904,44.0007042567185,51.9111691342483,38.9228642857945,34.2945721888507,23.6300424752621,29.0925151881133,27.9587641827183,24.0080253549469,16.3368431314495,33.9757883427427,22.6450585316189,23.9961092397363,23.507992008517,31.7556155538224,24.7050325522058,15.9581027183338,22.9448102653805,18.6672283851141,24.5189892580281,21.9025705141473,15.2759045775474,19.5318943857846,14.6579199891531,29.8827435358793,22.6409570755104,18.3921683546778,23.9482632641114,17.6324636867787,14.0835553243249,17.1672385181699,13.2119431629218,19.4027528054262,27.8082710883366,25.3402147424878,22.1698416446576,28.7146409480123,27.2486304241086,30.2979384874285,30.4557561883756,18.7092210809384,25.9818879305897,22.9039637332097,18.1864639613179,30.4474885627188,33.5372265772968,31.6909228171386,32.4340287751738,34.2369763240483,34.247299060998,33.7174219888091,35.4120889847497,35.846960106721,41.9627617279375,39.728526307141,45.4796021552251,53.9477953599476,63.6695334344047,54.0851867604298,26.0759536219518,15.4356918568927,57.1624494561971,40.1964861328587,28.1540490706509,28.5651106388339,34.536479634321,37.5131355799417,35.1357309274895,33.669935821923,32.2679761850268,38.3748564506945,26.8928673416288,31.2361661104607,33.5338229844887,39.5480539807857,40.6339533764425,37.438559371821,47.0376394363643,23.4209450849944,27.0498565615393,26.0673699642002,23.4682509472827,22.5135981847923,24.7887225527089,41.3308414342886,39.4066806881851,37.6361349961492,60.4763359257784,35.0374722003798,28.8941722816408,25.4094186994885,27.5889765088364,26.047133253261,23.9348300674535,23.5910832709665,23.5096078823801,33.771053822134,28.7536413054709,34.9812490808393,37.1324831006327,59.3560363175713,49.5136861320478,53.5512308713338,36.3963784628211,22.7389694124582,28.1929409244705,27.4987038955805,22.9996443322732,25.2934448737142,28.5652369063216,24.9771069257982,28.6895962273268,25.2469746199603,30.774770350895,24.7433605220764,27.9749670622751,28.2065664233948,22.6186925908908,38.0733978673097,42.2917274796371,31.1808523324348,29.0596567877903,25.2005126173237,30.1640299493083,40.647819279904,23.347608236803,17.9601822376454,19.3881057959519,26.2865677747807,19.6062833192507,24.0615051170508,20.2405350837447,19.8733983379692,21.3455400091123,20.5645642509957,30.2332381493612,20.1214132143998,19.3835481630756,30.5194727499191,30.5313818181915,27.1914312493579,25.0928552280743,33.0058889572822,32.483208216885,23.0576360957946,24.0338312646446,18.9037539328303,16.0423820273125,28.7593449721593,23.1920938864997,33.0033738394198,16.6815406819356,16.3855595568492,21.085465456589,15.8609405923378,17.9113635978696,11.7723419617367,13.9866667511803,16.4411072521884,51.86244748208,30.9274823461177,38.8129980576733,37.5940656706575,26.6416304048244,31.3024080377129,20.7707878565457,28.0680938564055,30.6054878461343,31.7077266437972,28.1936953316457,23.1153292118809,27.0384009959779,19.4019510714832,25.6985148115527,20.3612574153805,27.1965487990168,23.3718925380509,23.493995546752,47.7335309007557,29.5774153998362,24.195016588095,25.3812550931233,24.8815072257218,24.4566071395719,27.7820553552731,27.8542145794382,25.3903263724509,34.3479679223251,22.9895545842163,11.2738587736838,27.0624948339602,27.4661094158782,20.417374776125,17.1782565225382,19.5989105569303,19.4813016151952,22.3951541931594,22.125321673825,12.5623742829523,12.6733202753461,36.3412788722405,25.7461023418509,26.9102707771847,29.3621059929817,29.1813513937995,25.6298947667832,26.2026079953532,29.8332844892646,26.8570756862073,18.13721998389,23.391674951747,32.3560164055978,23.668113043521,21.7391038057718,48.0668413264248,43.7312328146907,40.2815216176546,54.3946157019614,34.9673165198265,41.4778270747112,34.2493537379786,32.1552568618599,29.0911820340511,18.0720589637461,17.0320337507655,17.1868654031819,12.8889886757766,15.7568979547248,15.8632718451837,18.2256075062588,21.1650965515384,18.1256963593682,21.2281727818246,29.8907561042429,31.1239401252804,21.683167930775,26.0124187263075,27.6689374668937,22.2450645224517,23.3359064191696,25.5483470976229,25.3526175577534,29.0601793528367,22.8131369901216,24.1441716974178,25.3768485243381,23.2411303229675,23.318800395979,25.719859329286,25.4945517078682,21.7987419123987,17.3076078337389,19.7246552980092,22.6293706574374,26.79884673006,25.274236134416,18.7496877455704,21.645157495526,20.5613497176774,25.7928441750609,30.2530168153519,24.9879569476386,28.0571135828869,23.3710985704623,22.557526464004,20.8707832016542,20.6065998777335,21.2197272079256,17.9863616115321,22.4574344107592,19.3383948643468,24.6761948368808,26.6915617134614,24.8098584113851
|short_description=p3@Ube2d3
}}

Revision as of 01:58, 6 August 2015

Short description:p3@Ube2d3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Ube2d3_5end
Coexpression cluster:NA
Association with transcript: 46bp_to_uc008rlo.1_5end
EntrezGene:66105
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Ube2d3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G713.29
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I539.09
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I648.23
CD326+ enterocyte, pool1.CNhs13542.11848-124I327.52
CD326+ enterocyte, pool2.CNhs13197.11849-124I433.56
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I731.39
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I833.17
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E939.90
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E785.18
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F267.41
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E677.56
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F170.44
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E435.44
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E838.90
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A121.32
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A316.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A511.19
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A228.71
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A422.76
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A624.61
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A319.13
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H221.55
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I921.94
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D139.20
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D232.81
GP2+ M cell, pool1.CNhs13228.11845-124H943.07
GP2+ M cell, pool2.CNhs13231.11846-124I145.23
GP2+ M cell, pool3.CNhs13240.11847-124I242.66
Ileum epithelium, pool1.CNhs13199.10252-104B937.24
Ileum epithelium, pool2.CNhs13232.10253-104C127.98
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C835.92
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I318.42
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G617.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F518.78
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F623.11
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F718.99
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G833.06
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H142.97
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H335.08
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G949.41
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H240.30
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H439.33
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D832.10
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D924.53
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B320.01
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B719.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C27.85
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B815.38
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C318.08
Mouse Astrocytes, donor2.CNhs12078.11552-120C419.04
Mouse Astrocytes, donor3.CNhs12107.11633-122C411.50
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A237.08
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I944.25
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A141.68
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C150.68
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E133.24
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C538.16
Mouse Granule cells, donor1.CNhs12131.11713-123C313.35
Mouse Granule cells, donor2.CNhs12357.11731-123E312.70
Mouse Granule cells, donor3.CNhs12108.11636-122C713.31
Mouse Meningeal cells, donor1.CNhs12132.11716-123C621.69
Mouse Meningeal cells, donor3.CNhs12109.11639-122D119.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C720.25
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E721.76
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D227.71
Mouse Microglia, donor1.CNhs12629.11718-123C816.48
Mouse Microglia, donor2.CNhs12634.11736-123E89.99
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D514.62
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F57.97
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D910.52
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F120.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D514.58
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D28.45
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F210.16
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D66.43
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D323.12
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F318.51
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D723.35
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D416.22
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F414.55
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D816.67
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E426.24
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E516.88
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I617.27
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D620.62
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F617.80
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E118.64
Mouse Schwann, donor1.CNhs12507.11728-123D948.46
Mouse Schwann, donor2.CNhs12573.11746-123F937.79
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G324.64
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F745.60
Mouse hepatocyte, donor1.CNhs13078.11714-123C439.44
Mouse hepatocyte, donor3.CNhs12615.11637-122C853.43
Mouse hepatocyte, donor6.CNhs13090.11822-124F461.73
Mouse hepatocyte, donor8.CNhs13091.11824-124F657.35
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A743.82
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I728.63
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E322.86
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I829.33
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G613.24
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H132.08
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I825.48
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B628.44
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G131.17
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G228.12
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G323.25
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B637.11
accessory axillary lymph node, adult.CNhs10475.1063-29H969.40
adrenal gland, adult.CNhs10508.49-24D733.10
adrenal gland, embryo E14.CNhs11038.406-44C520.12
adrenal gland, embryo E16.CNhs11004.1254-43D623.75
adrenal gland, embryo E17.CNhs11043.1263-45I125.60
adrenal gland, embryo E18.CNhs11026.1262-18F525.32
adrenal gland, neonate N00.CNhs11191.1311-23C123.64
adrenal gland, neonate N25.CNhs11223.1377-27I334.68
amnion, adult pregnant day17.5.CNhs10488.583-22A844.00
aorta, adult.CNhs10498.46-23H151.91
bone (os femoris), adult.CNhs10483.56-12G238.92
bone (os femoris), neonate N02.CNhs11227.1985-43F534.29
bone (os femoris), neonate N16.CNhs11225.1525-43A623.63
bone (os femoris), neonate N20.CNhs11195.1350-25C329.09
cecum, adult.CNhs10467.37-13H427.96
cerebellum, adult.CNhs10494.15-8B224.01
cerebellum, neonate N30.CNhs11135.1395-42I216.34
colon, adult.CNhs10468.36-18H733.98
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C722.65
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D124.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D423.51
corpora quadrigemina, adult.CNhs10501.16-22A431.76
corpus striatum, adult.CNhs10487.19-21D824.71
corpus striatum, neonate N00.CNhs11226.630-43F115.96
cortex, adult.CNhs10473.12-14D522.94
cortex, neonate N30.CNhs11107.1392-42F218.67
diencephalon, adult.CNhs10482.20-12F224.52
diencephalon, neonate N30.CNhs11201.1388-42B221.90
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B115.28
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A219.53
epididymis, adult.CNhs10490.58-23B214.66
eyeball, adult.CNhs10484.31-12G429.88
eyeball, embryo E12.CNhs11016.345-16C622.64
eyeball, embryo E14.CNhs10521.399-16E218.39
eyeball, embryo E15.CNhs10593.426-16C923.95
eyeball, embryo E17.CNhs11023.1261-18D417.63
eyeball, neonate N00.CNhs11207.633-15C614.08
eyeball, neonate N01.CNhs11140.1532-43E717.17
eyeball, neonate N02.CNhs11205.1551-44G813.21
eyeball, neonate N16.CNhs11188.777-19A219.40
forelimb, embryo E11.CNhs10596.335-25E227.81
forelimb, embryo E12.CNhs10600.359-14H225.34
forelimb, embryo E13.CNhs10589.384-1E222.17
forelimb, embryo E14.CNhs10577.413-26A828.71
forelimb, embryo E15.CNhs11007.437-20E727.25
forelimb, embryo E17.CNhs10598.1517-43C430.30
forelimb, embryo E18.CNhs11008.1520-43B530.46
gonad, embryo E13.CNhs11044.1564-45I618.71
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C825.98
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D222.90
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D518.19
heart, embryo E11.CNhs10586.331-24E930.45
heart, embryo E12.CNhs11015.353-12F533.54
heart, embryo E13.CNhs11013.376-3I931.69
heart, embryo E14.CNhs10597.403-26D432.43
heart, embryo E15.CNhs11017.431-16C834.24
heart, embryo E16.CNhs11021.457-17C634.25
heart, embryo E17.CNhs11025.479-18E533.72
heart, embryo E18.CNhs11030.1283-20G335.41
heart, neonate N00.CNhs11213.639-21E335.85
heart, neonate N03.CNhs11221.1349-25I241.96
heart, neonate N10.CNhs11118.749-24G139.73
heart, neonate N16.CNhs11209.782-15G145.48
heart, neonate N20.CNhs11127.821-26I653.95
heart, neonate N25.CNhs11196.1351-25D363.67
heart, neonate N30.CNhs11202.1390-42D254.09
hippocampus, adult.CNhs10478.13-16E826.08
hippocampus, neonate N00.CNhs11228.627-43G115.44
intestinal mucosa, adult.CNhs10506.860-29I357.16
intestine, adult.CNhs10496.178-9A340.20
intestine, embryo E12.CNhs11019.1251-16I528.15
intestine, embryo E13.CNhs11010.381-16D528.57
intestine, embryo E15.CNhs10602.976-16D834.54
intestine, embryo E16.CNhs10585.463-22H437.51
intestine, embryo E17.CNhs10582.482-18D335.14
intestine, embryo E18.CNhs10526.1289-20F733.67
intestine, neonate N00.CNhs11126.644-26D132.27
intestine, neonate N01.CNhs11192.1322-23E938.37
intestine, neonate N06.CNhs11102.688-20B826.89
intestine, neonate N07.CNhs11095.720-20F231.24
intestine, neonate N10.CNhs11098.755-23A533.53
intestine, neonate N20.CNhs11187.827-18D139.55
intestine, neonate N25.CNhs11121.1352-25E340.63
intestine, neonate N30.CNhs11131.1384-42G137.44
kidney, embryo E14.CNhs10606.411-4I947.04
kidney, embryo E15.CNhs10997.434-16F823.42
kidney, embryo E16.CNhs10584.464-22A527.05
kidney, embryo E17.CNhs11028.483-18I226.07
kidney, embryo E18.CNhs11001.1288-20C723.47
kidney, neonate N00.CNhs11214.646-21G722.51
kidney, neonate N10.CNhs11206.758-6D524.79
kidney, neonate N20.CNhs11113.832-19I141.33
kidney, neonate N25.CNhs11122.1353-25F339.41
kidney, neonate N30.CNhs11203.1385-42H137.64
liver, adult pregnant day01.CNhs10466.508-5B260.48
liver, embryo E12.CNhs10601.355-15F835.04
liver, embryo E13.CNhs10524.378-3H628.89
liver, embryo E14.CNhs10594.409-16E125.41
liver, embryo E15.CNhs10520.433-16D727.59
liver, embryo E16.CNhs10523.462-17F526.05
liver, embryo E17.CNhs10510.481-18A323.93
liver, embryo E18.CNhs10579.499-43G423.59
liver, neonate N00.CNhs11117.641-24F423.51
liver, neonate N03.CNhs11123.1345-25G233.77
liver, neonate N06.CNhs11101.684-20A828.75
liver, neonate N07.CNhs11103.716-20H234.98
liver, neonate N10.CNhs11115.751-24B937.13
liver, neonate N20.CNhs11220.823-25A359.36
liver, neonate N25.CNhs11198.1368-26H149.51
liver, neonate N30.CNhs11106.1382-42D153.55
lung, adult.CNhs10474.28-22B136.40
lung, embryo E12.CNhs10522.354-16G222.74
lung, embryo E14.CNhs10604.404-26F828.19
lung, embryo E15.CNhs11020.432-17C527.50
lung, embryo E16.CNhs10998.458-17B623.00
lung, embryo E17.CNhs10605.480-44A625.29
lung, embryo E18.CNhs10583.1287-20I628.57
lung, neonate N00.CNhs11224.640-42C624.98
lung, neonate N06.CNhs11212.683-20E528.69
lung, neonate N07.CNhs11111.715-19A325.25
lung, neonate N10.CNhs11219.750-23E630.77
lung, neonate N20.CNhs11109.822-18A424.74
lung, neonate N25.CNhs11119.1359-25C727.97
lung, neonate N30.CNhs11133.1394-42H228.21
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A122.62
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A138.07
mammary gland, adult lactating day02.CNhs10480.595-22B642.29
mammary gland, adult pregnant day19.CNhs10476.588-5H231.18
medulla oblongata, adult.CNhs10477.17-12C229.06
medulla oblongata, neonate N30.CNhs11200.1396-42A325.20
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C730.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C240.65
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E123.35
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E217.96
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E319.39
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D726.29
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D819.61
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D924.06
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D420.24
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D519.87
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D621.35
olfactory brain, adult.CNhs10489.18-22I920.56
ovary, adult.CNhs10507.91-2I730.23
ovary, embryo E18.CNhs11040.505-44H720.12
ovary, neonate N00.CNhs11217.1299-22I419.38
oviduct, adult pregnant day01.CNhs10500.988-6G630.52
pancreas, adult.CNhs10486.34-16E430.53
pancreas, embryo E14.CNhs11012.405-44F427.19
pancreas, embryo E15.CNhs11042.1556-45F225.09
pancreas, embryo E16.CNhs11003.460-26E533.01
pancreas, embryo E17.CNhs10599.1558-45G332.48
pancreas, embryo E18.CNhs10580.1535-43I723.06
pancreas, neonate N00.CNhs11105.645-26G924.03
pancreas, neonate N01.CNhs11138.1531-43D718.90
pancreas, neonate N02.CNhs11139.1539-43D816.04
pancreas, neonate N16.CNhs11136.787-43B628.76
pancreas, neonate N25.CNhs11094.1555-45E223.19
pancreas, neonate N30.CNhs11182.1548-44H533.00
pituitary gland, adult.CNhs10493.21-1G816.68
pituitary gland, embryo E12.CNhs11018.346-16E616.39
pituitary gland, embryo E13.CNhs11009.370-44C721.09
pituitary gland, embryo E14.CNhs11037.398-44A515.86
pituitary gland, embryo E15.CNhs10592.427-16B917.91
pituitary gland, embryo E16.CNhs11036.449-43F611.77
pituitary gland, embryo E17.CNhs11039.1265-44F513.99
pituitary gland, neonate N00.CNhs11190.1308-22E916.44
placenta, adult pregnant day10.CNhs10472.539-13I751.86
placenta, adult pregnant day17.CNhs10464.577-18G330.93
prostate, adult.CNhs10470.859-1F838.81
skin, adult.CNhs10492.30-1C337.59
skin, neonate N00.CNhs11124.650-25G426.64
skin, neonate N03.CNhs11215.662-22H331.30
skin, neonate N06.CNhs11097.693-20I520.77
skin, neonate N10.CNhs11108.762-6C428.07
small intestine, neonate N16.CNhs11114.790-21I130.61
spinal cord, adult.CNhs10505.24-13C931.71
spleen, adult.CNhs10465.25-2G228.19
spleen, embryo E16.CNhs11035.461-43C123.12
spleen, embryo E18.CNhs11011.1271-21F227.04
spleen, neonate N10.CNhs11116.752-24D119.40
spleen, neonate N20.CNhs11112.824-19H125.70
spleen, neonate N25.CNhs11099.1354-25G320.36
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C627.20
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C923.37
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D323.49
stomach, adult.CNhs10503.33-1H647.73
stomach, embryo E12.CNhs10588.356-43E329.58
stomach, embryo E15.CNhs10603.1252-16G824.20
stomach, embryo E16.CNhs11022.459-17D425.38
stomach, embryo E17.CNhs11006.1035-18D524.88
stomach, embryo E18.CNhs10999.1286-20C624.46
stomach, neonate N03.CNhs11193.1340-24B827.78
stomach, neonate N07.CNhs11210.718-18A927.85
stomach, neonate N25.CNhs11104.1355-25E425.39
stomach, neonate N30.CNhs11134.1386-42I134.35
submandibular gland, adult.CNhs10469.59-29C122.99
testis, adult.CNhs10504.57-7G511.27
testis, embryo E13.CNhs11031.389-23F527.06
testis, embryo E15.CNhs11034.443-27C527.47
testis, embryo E16.CNhs11033.470-26G520.42
testis, embryo E17.CNhs11029.486-18I517.18
testis, embryo E18.CNhs11027.503-18G519.60
testis, neonate N00.CNhs11189.1300-22B719.48
testis, neonate N07.CNhs11222.726-26I422.40
testis, neonate N10.CNhs11204.763-44D922.13
testis, neonate N20.CNhs11110.839-18H312.56
testis, neonate N30.CNhs11130.1391-42E212.67
thymus, adult.CNhs10471.38-12B536.34
thymus, embryo E14.CNhs11041.402-44I425.75
thymus, embryo E15.CNhs11005.430-45I226.91
thymus, embryo E16.CNhs11002.456-26C529.36
thymus, embryo E17.CNhs10581.478-18C129.18
thymus, embryo E18.CNhs10595.1273-19G425.63
thymus, neonate N02.CNhs11181.1541-43F826.20
thymus, neonate N03.CNhs11137.2104-43C729.83
thymus, neonate N06.CNhs11197.681-26C426.86
thymus, neonate N07.CNhs11211.713-19D318.14
thymus, neonate N10.CNhs11194.748-24E423.39
thymus, neonate N20.CNhs11186.820-7A232.36
thymus, neonate N25.CNhs11125.1362-25G723.67
thymus, neonate N30.CNhs11132.1393-42G221.74
tongue, adult.CNhs10499.32-1B448.07
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H343.73
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F740.28
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G554.39
urinary bladder, adult.CNhs10481.879-12E434.97
uterus, adult pregnant day19.CNhs10497.590-15F541.48
uterus, adult.CNhs10509.92-27E534.25
vagina, adult.CNhs10502.89-27D532.16
vesicular gland, adult.CNhs10491.51-27F829.09
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A118.07
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A217.03
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A317.19
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D712.89
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A415.76
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A515.86
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A618.23
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A721.17
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A818.13
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A921.23
whole body, embryo E11.CNhs11014.324-5I829.89
whole body, embryo E12.CNhs10587.857-27C931.12
whole body, embryo E13.CNhs10512.372-23H221.68
whole body, embryo E14.5.CNhs10578.420-27D226.01
whole body, embryo E14.CNhs10519.395-14B127.67
whole body, embryo E16.CNhs10514.453-14F222.25
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G523.34
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G525.55
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G525.35
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G529.06
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G522.81
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G524.14
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G525.38
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G523.24
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G523.32
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G525.72
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G525.49
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G521.80
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G517.31
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G519.72
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G522.63
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G526.80
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G525.27
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G518.75
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G521.65
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G520.56
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G525.79
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G530.25
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G524.99
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G528.06
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G523.37
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G522.56
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G520.87
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G520.61
whole body, embryo E17.5.CNhs10513.490-9F921.22
whole body, embryo E17.CNhs10517.475-3I517.99
whole body, embryo E18.CNhs10516.493-3B322.46
whole body, neonate N00.CNhs10525.657-19C219.34
whole body, neonate N01.CNhs10576.659-23C624.68
whole body, neonate N06.CNhs10515.692-21D126.69
whole body, neonate N10.CNhs10518.761-6B424.81





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
endoderm-derived structure2.67e-13118
endoderm2.67e-13118
presumptive endoderm2.67e-13118
digestive system1.27e-12116
digestive tract1.27e-12116
primitive gut1.27e-12116
subdivision of digestive tract5.14e-12114
epithelial tube7.18e-0947
unilaminar epithelium1.86e-0766
primary circulatory organ2.34e-0718
heart2.34e-0718
primitive heart tube2.34e-0718
primary heart field2.34e-0718
anterior lateral plate mesoderm2.34e-0718
heart tube2.34e-0718
heart primordium2.34e-0718
cardiac mesoderm2.34e-0718
cardiogenic plate2.34e-0718
heart rudiment2.34e-0718
gut epithelium3.34e-0755
endo-epithelium6.21e-0769
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