FFCP PHASE1:Mm9::chr1:80705950..80705976,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1921|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:80705950..80705976,-|id=chr1:80705950..80705976,-|ontology_enrichment_celltype=CL:0000107!5.60e-08!9|ontology_enrichment_celltype_v019_2=CL:0000107,1.41e-16,9;CL:0000540,2.70e-10,33;CL:0000047,2.70e-10,33;CL:0000031,2.70e-10,33;CL:0000404,2.70e-10,33;CL:0000221,4.04e-10,44;CL:0000133,4.04e-10,44;CL:0002319,4.12e-09,43;CL:0000393,4.34e-09,39;CL:0000211,4.34e-09,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!9.04e-10!75;UBERON:0001016!9.04e-10!75;UBERON:0004121!1.08e-09!102;UBERON:0000924!1.08e-09!102;UBERON:0006601!1.08e-09!102;UBERON:0000010!3.96e-09!11;UBERON:0001017!7.14e-09!73;UBERON:0005743!7.14e-09!73;UBERON:0002410!5.60e-08!9;UBERON:0000468!7.51e-07!333|ontology_enrichment_uberon_v019_2=UBERON:0000010,2.89e-19,11;UBERON:0001016,1.82e-18,75;UBERON:0002410,1.41e-16,9;UBERON:0001017,1.78e-16,73;UBERON:0004121,8.68e-15,95;UBERON:0000924,8.68e-15,95;UBERON:0006601,8.68e-15,95;UBERON:0010371,5.00e-09,73;UBERON:0002346,5.28e-09,64;UBERON:0003075,5.28e-09,64;UBERON:0007284,5.28e-09,64;UBERON:0000073,3.65e-08,54;UBERON:0001049,8.49e-08,52;UBERON:0005068,8.49e-08,52;UBERON:0006241,8.49e-08,52;UBERON:0007135,8.49e-08,52;UBERON:0010314,4.45e-07,92;UBERON:0000011,7.69e-07,3|phase1_expression=1.92178616525753,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02903774414379,0.573066879877513,0,0,0,0,0,0,0,0,0,0.599200221036809,0.384218305321555,0,0,0.210324961351382,0.285650984403804,1.54607978666129,0,0,0,2.20231761998777,1.14918604276669,0.614426133024974,0.395658863190582,0.0914876436024097,0,0.279182999001381,1.12552522006336,0.763991238884051,2.35702868378934,3.13217697758026,0.559198337475902,2.12033341332915,1.51143120213571,0,0.860423876981386,0,0,0,0.896053774194671,0.421333260395256,0,0,0,5.63373679106722,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0.148442139064825,0.346970653532272,0,0.461230994512117,0,0.587943535678524,0.125666591329675,0,1.01219549843938,0,0.808834249737046,0,0,0,1.17112318804619,0.628340120440365,0,0,0,0,1.19832511523858,2.74500361691176,0.753926112677186,1.21677024134594,1.02286182932132,2.0778804455956,1.62241263067758,0.407357455401265,0.248813941220186,0,1.05220927943237,0,0,0.180062129805349,0.150704817835715,0.136072998302656,0.2562274405697,0.0937017245597288,0.517406741478031,0,0,0,0,0,0.348252166522167,0.205782136407943,0,0,0,0,0.207125772535502,0,0,0,0,0.154267112887378,0.465067889500816,0.268273401399619,0.350296027101508,0.822799249567402,0.656669856316381,0.729619285912702,1.02339991197733,0.439100230582101,0.402619256281115,1.89260953707715,0.411618449517138,0,0,0,0.232236671860439,0.77320476793256,0.403367049246685,0.444756087689741,0.380451252225118,0,0.329397909448022,0.502670417600539,0.198956472041151,0.58489226135736,0,0.216138049874694,0.199141273254367,0,0.114248512609729,0,0,0.581857461502877,0.350679099451593,0.69560190836683,0.590440591918409,0.627994911365499,0.493588655687202,0,0,0,0.224862112384854,0.202860121388503,0,0.25462585178142,0,0,0,1.43768206527355,0.744281895337007,0,0,0,0,0.739012760666419,0,0.977789858652155,0.509235257325564,0.469380496577004,0.670025029767263,1.6663054862021,0.585400943573396,1.57635144106191,1.10732344824387,0.637819074629948,0.81931657357869,0.518054945597687,0.433947175744535,0,0,0.491764273019036,0.551873492609465,1.12385412991454,3.04750385139728,0,2.01976741763498,3.78609863299508,1.95219372148319,8.83235930704476,6.93009514062401,6.01556420022464,6.22768367735431,6.47697122679831,2.04579100537918,3.55759000151871,0.963963949265421,0.283880170416537,0,0.488660878060728,0.329940245945071,0,0.242780636154981,0,0,0,0.614870295887855,0,0.363533729477506,0.356497378384721,0.316036757935816,0,0,0,0,0,0,0.177340233642274,0,0.329098041204242,0.304464949114599,0,0.42366414172764,0,0.49465875882444,0.968786560175433,0.482503399425247,0.477489376012546,0.164140899745061,0.291480836629851,2.96680483216816,0.854354403989263,0,0.740778109478847,0.188368457004691,0.546776910884101,0.686334519619568,0,0,0,0,0.158167996790568,0.813277868507395,1.18805874903981,1.46361807210128,0.655087691238533,0.674321731924103,0.661227645802687,0,0,0,0,0,0,0.194451188344048,0,0.506868376472335,0.58678619322877,0.13020438484395,0.104859344425711,0,0,0,0,0.205421914329655,0,0.358053391334963,0.198681354781265,0,0,0.100966449948148,0,0,0,0,0,0.680191150845634,0,0,0,0.386379188064381,0,0,0.214368379079066,0,2.25900737046827,0.920650473014354,2.29158205375759,1.54667864109319,2.05524755931193,0.755393897389701,0.675022500231806,1.80128481289688,1.35942722695261,0,0,0,0,0.243106717068294,0.419226325255965,0.183843508450014,0.44449345560323,0.824140228955577,0.962757628775446,0.505394423527595,1.52087579934144,0.943131706930381,0.842773567228942,1.08842759088278,0.804096565378586,2.38146845641537,0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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1921 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:80705950..80705976,- | |||
|description=CAGE_peak_at_chr1:80705950..80705976,- | |||
|id=chr1:80705950..80705976,- | |||
|ontology_enrichment_celltype=CL:0000107!5.60e-08!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,1.41e-16,9;CL:0000540,2.70e-10,33;CL:0000047,2.70e-10,33;CL:0000031,2.70e-10,33;CL:0000404,2.70e-10,33;CL:0000221,4.04e-10,44;CL:0000133,4.04e-10,44;CL:0002319,4.12e-09,43;CL:0000393,4.34e-09,39;CL:0000211,4.34e-09,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!9.04e-10!75;UBERON:0001016!9.04e-10!75;UBERON:0004121!1.08e-09!102;UBERON:0000924!1.08e-09!102;UBERON:0006601!1.08e-09!102;UBERON:0000010!3.96e-09!11;UBERON:0001017!7.14e-09!73;UBERON:0005743!7.14e-09!73;UBERON:0002410!5.60e-08!9;UBERON:0000468!7.51e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000010,2.89e-19,11;UBERON:0001016,1.82e-18,75;UBERON:0002410,1.41e-16,9;UBERON:0001017,1.78e-16,73;UBERON:0004121,8.68e-15,95;UBERON:0000924,8.68e-15,95;UBERON:0006601,8.68e-15,95;UBERON:0010371,5.00e-09,73;UBERON:0002346,5.28e-09,64;UBERON:0003075,5.28e-09,64;UBERON:0007284,5.28e-09,64;UBERON:0000073,3.65e-08,54;UBERON:0001049,8.49e-08,52;UBERON:0005068,8.49e-08,52;UBERON:0006241,8.49e-08,52;UBERON:0007135,8.49e-08,52;UBERON:0010314,4.45e-07,92;UBERON:0000011,7.69e-07,3 | |||
|phase1_expression=1.92178616525753,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02903774414379,0.573066879877513,0,0,0,0,0,0,0,0,0,0.599200221036809,0.384218305321555,0,0,0.210324961351382,0.285650984403804,1.54607978666129,0,0,0,2.20231761998777,1.14918604276669,0.614426133024974,0.395658863190582,0.0914876436024097,0,0.279182999001381,1.12552522006336,0.763991238884051,2.35702868378934,3.13217697758026,0.559198337475902,2.12033341332915,1.51143120213571,0,0.860423876981386,0,0,0,0.896053774194671,0.421333260395256,0,0,0,5.63373679106722,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0.148442139064825,0.346970653532272,0,0.461230994512117,0,0.587943535678524,0.125666591329675,0,1.01219549843938,0,0.808834249737046,0,0,0,1.17112318804619,0.628340120440365,0,0,0,0,1.19832511523858,2.74500361691176,0.753926112677186,1.21677024134594,1.02286182932132,2.0778804455956,1.62241263067758,0.407357455401265,0.248813941220186,0,1.05220927943237,0,0,0.180062129805349,0.150704817835715,0.136072998302656,0.2562274405697,0.0937017245597288,0.517406741478031,0,0,0,0,0,0.348252166522167,0.205782136407943,0,0,0,0,0.207125772535502,0,0,0,0,0.154267112887378,0.465067889500816,0.268273401399619,0.350296027101508,0.822799249567402,0.656669856316381,0.729619285912702,1.02339991197733,0.439100230582101,0.402619256281115,1.89260953707715,0.411618449517138,0,0,0,0.232236671860439,0.77320476793256,0.403367049246685,0.444756087689741,0.380451252225118,0,0.329397909448022,0.502670417600539,0.198956472041151,0.58489226135736,0,0.216138049874694,0.199141273254367,0,0.114248512609729,0,0,0.581857461502877,0.350679099451593,0.69560190836683,0.590440591918409,0.627994911365499,0.493588655687202,0,0,0,0.224862112384854,0.202860121388503,0,0.25462585178142,0,0,0,1.43768206527355,0.744281895337007,0,0,0,0,0.739012760666419,0,0.977789858652155,0.509235257325564,0.469380496577004,0.670025029767263,1.6663054862021,0.585400943573396,1.57635144106191,1.10732344824387,0.637819074629948,0.81931657357869,0.518054945597687,0.433947175744535,0,0,0.491764273019036,0.551873492609465,1.12385412991454,3.04750385139728,0,2.01976741763498,3.78609863299508,1.95219372148319,8.83235930704476,6.93009514062401,6.01556420022464,6.22768367735431,6.47697122679831,2.04579100537918,3.55759000151871,0.963963949265421,0.283880170416537,0,0.488660878060728,0.329940245945071,0,0.242780636154981,0,0,0,0.614870295887855,0,0.363533729477506,0.356497378384721,0.316036757935816,0,0,0,0,0,0,0.177340233642274,0,0.329098041204242,0.304464949114599,0,0.42366414172764,0,0.49465875882444,0.968786560175433,0.482503399425247,0.477489376012546,0.164140899745061,0.291480836629851,2.96680483216816,0.854354403989263,0,0.740778109478847,0.188368457004691,0.546776910884101,0.686334519619568,0,0,0,0,0.158167996790568,0.813277868507395,1.18805874903981,1.46361807210128,0.655087691238533,0.674321731924103,0.661227645802687,0,0,0,0,0,0,0.194451188344048,0,0.506868376472335,0.58678619322877,0.13020438484395,0.104859344425711,0,0,0,0,0.205421914329655,0,0.358053391334963,0.198681354781265,0,0,0.100966449948148,0,0,0,0,0,0.680191150845634,0,0,0,0.386379188064381,0,0,0.214368379079066,0,2.25900737046827,0.920650473014354,2.29158205375759,1.54667864109319,2.05524755931193,0.755393897389701,0.675022500231806,1.80128481289688,1.35942722695261,0,0,0,0,0.243106717068294,0.419226325255965,0.183843508450014,0.44449345560323,0.824140228955577,0.962757628775446,0.505394423527595,1.52087579934144,0.943131706930381,0.842773567228942,1.08842759088278,0.804096565378586,2.38146845641537,0.463537303779422,0.964546102318525,0,0.883193520806384,1.37147700954166,1.95223386775271,1.1921809497366,0.872078499793971,0.658765662907314,0.338458431566706,0.548783918618318,0.789209134313529,0.679020569229309,0.561142271657738,0.830445126869219,0.394017929502254,1.22769312950907,0.77468420592983,0.578719832943424,0.499621155875892,0.233931608445408,1.71896843238639,2.29545998482612,1.76473135295612,0.695603506861264 | |||
|short_description=p@chr1:80705950..80705976,- | |||
}} |
Latest revision as of 01:37, 6 August 2015
Short description: | p@chr1:80705950..80705976, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:80705950..80705976, - |
Coexpression cluster: | MCL_coexpression_mm9:1921 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 1.41e-16 | 9 |
neuron | 2.70e-10 | 33 |
neuronal stem cell | 2.70e-10 | 33 |
neuroblast | 2.70e-10 | 33 |
electrically signaling cell | 2.70e-10 | 33 |
ectodermal cell | 4.04e-10 | 44 |
neurectodermal cell | 4.04e-10 | 44 |
neural cell | 4.12e-09 | 43 |
electrically responsive cell | 4.34e-09 | 39 |
electrically active cell | 4.34e-09 | 39 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system | 2.89e-19 | 11 |
nervous system | 1.82e-18 | 75 |
autonomic nervous system | 1.41e-16 | 9 |
central nervous system | 1.78e-16 | 73 |
ectoderm-derived structure | 8.68e-15 | 95 |
ectoderm | 8.68e-15 | 95 |
presumptive ectoderm | 8.68e-15 | 95 |
ecto-epithelium | 5.00e-09 | 73 |
neurectoderm | 5.28e-09 | 64 |
neural plate | 5.28e-09 | 64 |
presumptive neural plate | 5.28e-09 | 64 |
regional part of nervous system | 3.65e-08 | 54 |
neural tube | 8.49e-08 | 52 |
neural rod | 8.49e-08 | 52 |
future spinal cord | 8.49e-08 | 52 |
neural keel | 8.49e-08 | 52 |
structure with developmental contribution from neural crest | 4.45e-07 | 92 |
parasympathetic nervous system | 7.69e-07 | 3 |