FFCP PHASE1:Mm9::chr13:46597482..46597509,+: Difference between revisions
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{{FFCP|EntrezGene=67252|HGNC=|MCL_coexpression_id=413|UniProt=D3YTR7|association_with_transcript=0bp_to_ENSMUST00000119341_5end|description=CAGE_peak_3_at_Cap2_5end|id=chr13:46597482..46597509,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!2.35e-08!18;UBERON:0000948!2.35e-08!18;UBERON:0005498!2.35e-08!18;UBERON:0004140!2.35e-08!18;UBERON:0009881!2.35e-08!18;UBERON:0004141!2.35e-08!18;UBERON:0003084!2.35e-08!18;UBERON:0007005!2.35e-08!18;UBERON:0004139!2.35e-08!18;UBERON:0004291!2.35e-08!18;UBERON:0002021!9.73e-08!10;UBERON:0000411!9.73e-08!10;UBERON:0001950!9.73e-08!10;UBERON:0000033!9.74e-08!63;UBERON:0000468!1.64e-07!333;UBERON:0000955!2.28e-07!50;UBERON:0006238!2.28e-07!50;UBERON:0002616!4.98e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.37e-09,18;UBERON:0000948,1.37e-09,18;UBERON:0005498,1.37e-09,18;UBERON:0004140,1.37e-09,18;UBERON:0009881,1.37e-09,18;UBERON:0004141,1.37e-09,18;UBERON:0003084,1.37e-09,18;UBERON:0007005,1.37e-09,18;UBERON:0004139,1.37e-09,18;UBERON:0004291,1.37e-09,18;UBERON:0002021,6.95e-09,10;UBERON:0000411,6.95e-09,10;UBERON:0001950,6.95e-09,10;UBERON:0010314,1.25e-08,92;UBERON:0004535,9.37e-07,23;UBERON:0001009,9.37e-07,23|phase1_expression=0,0.697950815278722,0,0,0,0.839396359559449,0.700837921786577,0.258246646883153,0.140788722151667,0.234064526321993,0,0.159544317990673,0,0.262261207256992,0.333109761815663,0,0,0.157731082679119,0,0,5.27268398936633,0,0,0.159992422793407,0.22940928106717,1.14846392823004,0,0.646413698057667,0,0,0.221730510655305,0,0,0,0.866554859253824,0.166234645358492,0.612508068787107,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0.183546752161682,0,2.18025156380447,3.07560655828261,6.02732687130279,0.839918529752175,0,0,0,0,0.514518872071894,0,2.06268836910977,0.404632921719196,1.5869729378161,0,0,0,0,0,0,0.299600110518405,0.768436610643109,0.518448061542388,0.810035629990144,0.630974884054146,0.856952953211411,2.42955395046775,0.489963196859816,0.670918297127655,0,3.30347642998166,13.5348578370299,10.752457327937,0.395658863190582,0.914876436024097,0.52091337055676,5.58365998002762,10.6924895906019,9.47349136216223,1.17851434189467,1.70846016958924,0.559198337475902,0.075726193333184,0.0755715601067855,0.869593466105033,0,0,0,0,0,12.4995533917259,0,0,0,0,0,0,0,0,0.506719730950197,0,2.16949371466214,0,0.445326417194474,0.346970653532272,0.304465478312141,0.922461989024234,0.150722640552623,0.587943535678524,0.502666365318702,0,3.03658649531814,5.30766331169925,14.235482795372,13.9130156630048,7.27312879702833,1.86391761218122,10.2473278954042,8.79676168616511,1.02182822083437,0.11981512450592,0,0,11.5338792341713,13.2675174817402,1.13088916901578,30.7669046740329,33.7544403676036,13.5062228963714,11.1946471516753,1.01839363850316,4.85187185379363,0.505445516867349,3.99839526184301,0.390361328888111,1.60931473103431,1.44049703844279,3.76762044589288,2.4493139694478,2.43416068541215,2.43624483855295,4.39795730256327,0.215567992932842,1.51284864134255,1.23165786914764,1.53437012699302,1.94633074457919,5.2237824978325,1.64625709126355,0.59710280045548,0,0,0,16.7771875753757,9.14651633926275,18.1862682075625,20.1233025247429,23.8084720414359,23.6028682717689,23.950996309292,29.5100741539581,25.2213139513086,25.342216886676,15.7600765515931,16.3758995282629,19.7369983024199,16.9053588774109,17.7152472763691,19.5569652164638,0.514523061896422,0,0.793351699990633,1.06644125267617,1.85789337488351,1.67527699718721,0.80673409849337,1.11189021922435,1.14135375667535,1.89811624617805,1.4822905925161,2.26201687920243,1.39269530428806,1.9496408711912,6.29173586057955,0.864552199498777,2.38969527905241,0.948339504765408,1.14248512609729,0,1.4255592949172,0.387904974335251,0.561086559122548,0.379419222745544,0.590440591918409,0,0.123397163921801,0,0.667380422864376,0.589676985339609,0,0.405720242777006,0,0.25462585178142,0.287696137450811,0.324270453550071,0,0,0,0.312037673114561,0,0.358794827043824,0,0.739012760666419,1.32643988239339,0.977789858652155,0.678980343100753,0.704070744865506,1.34005005953453,2.38043640886014,1.95133647857799,1.26108115284953,1.10732344824387,1.43509291791738,1.47476983244164,1.38147985492716,1.44649058581512,0,0,0.491764273019036,0.275936746304732,5.61927064957272,3.98519734413491,0,53.5238365673271,0,0.390438744296638,0.215423397732799,0,0.222798674082394,0.283076530788832,0.809621403349789,0,0.790575555893047,8.9969968598106,2.12910127812403,1.6025904330053,1.62886959353576,9.07335676348945,0,0,0.302323556964751,0,0,0.307435147943927,0.258428293168221,0.363533729477506,0.712994756769443,1.58018378967908,0,0,0.340439605753788,0.36012218806262,0.129358683782755,0.643011105094777,0.709360934569094,0.535106452806212,0,0,0,0,1.32317038832977,4.28704257647848,2.42196640043858,1.5078231232039,0.954978752025092,0.656563598980245,2.04036585640896,6.11903496634682,0.341741761595705,0.206386867963223,0,0,0,0,0,0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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:67252 | |||
|HGNC= | |||
|MCL_coexpression_id=413 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:D3YTR7 | |||
|association_with_transcript=0bp_to_ENSMUST00000119341_5end | |||
|cluster_id=chr13:46597482..46597509,+ | |||
|description=CAGE_peak_3_at_Cap2_5end | |||
|id=chr13:46597482..46597509,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!2.35e-08!18;UBERON:0000948!2.35e-08!18;UBERON:0005498!2.35e-08!18;UBERON:0004140!2.35e-08!18;UBERON:0009881!2.35e-08!18;UBERON:0004141!2.35e-08!18;UBERON:0003084!2.35e-08!18;UBERON:0007005!2.35e-08!18;UBERON:0004139!2.35e-08!18;UBERON:0004291!2.35e-08!18;UBERON:0002021!9.73e-08!10;UBERON:0000411!9.73e-08!10;UBERON:0001950!9.73e-08!10;UBERON:0000033!9.74e-08!63;UBERON:0000468!1.64e-07!333;UBERON:0000955!2.28e-07!50;UBERON:0006238!2.28e-07!50;UBERON:0002616!4.98e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.37e-09,18;UBERON:0000948,1.37e-09,18;UBERON:0005498,1.37e-09,18;UBERON:0004140,1.37e-09,18;UBERON:0009881,1.37e-09,18;UBERON:0004141,1.37e-09,18;UBERON:0003084,1.37e-09,18;UBERON:0007005,1.37e-09,18;UBERON:0004139,1.37e-09,18;UBERON:0004291,1.37e-09,18;UBERON:0002021,6.95e-09,10;UBERON:0000411,6.95e-09,10;UBERON:0001950,6.95e-09,10;UBERON:0010314,1.25e-08,92;UBERON:0004535,9.37e-07,23;UBERON:0001009,9.37e-07,23 | |||
|phase1_expression=0,0.697950815278722,0,0,0,0.839396359559449,0.700837921786577,0.258246646883153,0.140788722151667,0.234064526321993,0,0.159544317990673,0,0.262261207256992,0.333109761815663,0,0,0.157731082679119,0,0,5.27268398936633,0,0,0.159992422793407,0.22940928106717,1.14846392823004,0,0.646413698057667,0,0,0.221730510655305,0,0,0,0.866554859253824,0.166234645358492,0.612508068787107,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0.183546752161682,0,2.18025156380447,3.07560655828261,6.02732687130279,0.839918529752175,0,0,0,0,0.514518872071894,0,2.06268836910977,0.404632921719196,1.5869729378161,0,0,0,0,0,0,0.299600110518405,0.768436610643109,0.518448061542388,0.810035629990144,0.630974884054146,0.856952953211411,2.42955395046775,0.489963196859816,0.670918297127655,0,3.30347642998166,13.5348578370299,10.752457327937,0.395658863190582,0.914876436024097,0.52091337055676,5.58365998002762,10.6924895906019,9.47349136216223,1.17851434189467,1.70846016958924,0.559198337475902,0.075726193333184,0.0755715601067855,0.869593466105033,0,0,0,0,0,12.4995533917259,0,0,0,0,0,0,0,0,0.506719730950197,0,2.16949371466214,0,0.445326417194474,0.346970653532272,0.304465478312141,0.922461989024234,0.150722640552623,0.587943535678524,0.502666365318702,0,3.03658649531814,5.30766331169925,14.235482795372,13.9130156630048,7.27312879702833,1.86391761218122,10.2473278954042,8.79676168616511,1.02182822083437,0.11981512450592,0,0,11.5338792341713,13.2675174817402,1.13088916901578,30.7669046740329,33.7544403676036,13.5062228963714,11.1946471516753,1.01839363850316,4.85187185379363,0.505445516867349,3.99839526184301,0.390361328888111,1.60931473103431,1.44049703844279,3.76762044589288,2.4493139694478,2.43416068541215,2.43624483855295,4.39795730256327,0.215567992932842,1.51284864134255,1.23165786914764,1.53437012699302,1.94633074457919,5.2237824978325,1.64625709126355,0.59710280045548,0,0,0,16.7771875753757,9.14651633926275,18.1862682075625,20.1233025247429,23.8084720414359,23.6028682717689,23.950996309292,29.5100741539581,25.2213139513086,25.342216886676,15.7600765515931,16.3758995282629,19.7369983024199,16.9053588774109,17.7152472763691,19.5569652164638,0.514523061896422,0,0.793351699990633,1.06644125267617,1.85789337488351,1.67527699718721,0.80673409849337,1.11189021922435,1.14135375667535,1.89811624617805,1.4822905925161,2.26201687920243,1.39269530428806,1.9496408711912,6.29173586057955,0.864552199498777,2.38969527905241,0.948339504765408,1.14248512609729,0,1.4255592949172,0.387904974335251,0.561086559122548,0.379419222745544,0.590440591918409,0,0.123397163921801,0,0.667380422864376,0.589676985339609,0,0.405720242777006,0,0.25462585178142,0.287696137450811,0.324270453550071,0,0,0,0.312037673114561,0,0.358794827043824,0,0.739012760666419,1.32643988239339,0.977789858652155,0.678980343100753,0.704070744865506,1.34005005953453,2.38043640886014,1.95133647857799,1.26108115284953,1.10732344824387,1.43509291791738,1.47476983244164,1.38147985492716,1.44649058581512,0,0,0.491764273019036,0.275936746304732,5.61927064957272,3.98519734413491,0,53.5238365673271,0,0.390438744296638,0.215423397732799,0,0.222798674082394,0.283076530788832,0.809621403349789,0,0.790575555893047,8.9969968598106,2.12910127812403,1.6025904330053,1.62886959353576,9.07335676348945,0,0,0.302323556964751,0,0,0.307435147943927,0.258428293168221,0.363533729477506,0.712994756769443,1.58018378967908,0,0,0.340439605753788,0.36012218806262,0.129358683782755,0.643011105094777,0.709360934569094,0.535106452806212,0,0,0,0,1.32317038832977,4.28704257647848,2.42196640043858,1.5078231232039,0.954978752025092,0.656563598980245,2.04036585640896,6.11903496634682,0.341741761595705,0.206386867963223,0,0,0,0,0,0,0,3.81868247206045,0.316335993581135,2.03319467126849,1.08005340821801,1.25452977608681,1.52853794622324,2.56242258131159,2.0663363931334,3.14107130380836,2.98114438571124,0.621339313086926,1.69107881605257,0,0.330916980914195,0.777804753376191,0.129159823477731,0.506868376472335,0.234714477291508,0.5208175393758,0.104859344425711,0,5.76060012515731,0,0.608175645870493,0.205421914329655,0.25984164595559,0,0,0.240390899039938,0,0.201932899896295,0.304827226619999,0.302478555410522,0.292373642219257,0.288635524920988,0.116876902181569,24.2601510468276,0,0,0,14.8755987404787,3.94133198447482,5.12824547948342,1.50057865355346,2.50786052017682,14.1187960654267,22.0956113523445,17.1868654031819,19.0757032401493,35.6242910280734,32.4819375877571,22.9507650078814,29.2708782095743,33.9856806738153,24.8524949640874,0.830298780673413,1.19707462020309,1.70733605754134,2.43106717068294,1.88651846365184,2.75765262675021,4.66718128383392,5.15087643097235,4.81378814387723,7.83361356467772,7.60437899670719,8.67681170375951,8.89594320963883,7.17081706934536,7.75378830900779,8.09699275181225,9.15486174964358,9.25964258225784,8.65380391686944,9.27353196846703,5.14303878578123,7.0990322463735,7.39152188836695,5.66851024866081,7.15231291156513,6.68455402344244,7.13419094203813,7.10288220882176,6.7902056922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| |||
|short_description=p3@Cap2 | |||
}} |
Revision as of 01:08, 6 August 2015
Short description: | p3@Cap2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Cap2_5end |
Coexpression cluster: | MCL_coexpression_mm9:413 |
Association with transcript: | 0bp_to_ENSMUST00000119341_5end |
EntrezGene: | 67252 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 1.37e-09 | 18 |
heart | 1.37e-09 | 18 |
primitive heart tube | 1.37e-09 | 18 |
primary heart field | 1.37e-09 | 18 |
anterior lateral plate mesoderm | 1.37e-09 | 18 |
heart tube | 1.37e-09 | 18 |
heart primordium | 1.37e-09 | 18 |
cardiac mesoderm | 1.37e-09 | 18 |
cardiogenic plate | 1.37e-09 | 18 |
heart rudiment | 1.37e-09 | 18 |
occipital lobe | 6.95e-09 | 10 |
visual cortex | 6.95e-09 | 10 |
neocortex | 6.95e-09 | 10 |
structure with developmental contribution from neural crest | 1.25e-08 | 92 |
cardiovascular system | 9.37e-07 | 23 |
circulatory system | 9.37e-07 | 23 |