FFCP PHASE1:Mm9::chr6:63205965..63206030,+: Difference between revisions
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{{FFCP|EntrezGene=14804|HGNC=|MCL_coexpression_id=30|UniProt=Q61625,E0CZG1|association_with_transcript=0bp_to_ENSMUST00000095852,ENSMUST00000159561_5end|description=CAGE_peak_1_at_Grid2_5end|id=chr6:63205965..63206030,+|ontology_enrichment_celltype=CL:0000540!4.62e-17!33;CL:0000047!4.62e-17!33;CL:0000031!4.62e-17!33;CL:0000404!4.62e-17!33;CL:0000221!9.99e-15!44;CL:0000133!9.99e-15!44;CL:0002319!1.98e-14!43;CL:0000117!3.33e-12!23;CL:0000337!3.33e-12!23;CL:0000393!1.53e-11!39;CL:0000211!1.53e-11!39;CL:0000055!1.22e-09!50|ontology_enrichment_celltype_v019_2=CL:0000540,4.67e-19,33;CL:0000047,4.67e-19,33;CL:0000031,4.67e-19,33;CL:0000404,4.67e-19,33;CL:0000221,2.89e-14,44;CL:0000133,2.89e-14,44;CL:0000393,4.50e-14,39;CL:0000211,4.50e-14,39;CL:0002319,6.59e-14,43;CL:0000117,4.25e-13,23;CL:0000337,4.25e-13,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.67e-29!73;UBERON:0005743!3.67e-29!73;UBERON:0000073!4.02e-29!75;UBERON:0001016!4.02e-29!75;UBERON:0004121!2.50e-26!102;UBERON:0000924!2.50e-26!102;UBERON:0006601!2.50e-26!102;UBERON:0002346!3.96e-22!71;UBERON:0003075!3.96e-22!71;UBERON:0007284!3.96e-22!71;UBERON:0000033!1.73e-21!63;UBERON:0001049!1.57e-19!52;UBERON:0005068!1.57e-19!52;UBERON:0006241!1.57e-19!52;UBERON:0007135!1.57e-19!52;UBERON:0000955!9.87e-18!50;UBERON:0006238!9.87e-18!50;UBERON:0002616!2.37e-17!49;UBERON:0003056!3.18e-17!49;UBERON:0002020!3.25e-15!34;UBERON:0003080!1.29e-13!40;UBERON:0002780!6.03e-13!39;UBERON:0001890!6.03e-13!39;UBERON:0006240!6.03e-13!39;UBERON:0000153!1.16e-12!94;UBERON:0002791!7.22e-12!29;UBERON:0003528!7.22e-12!29;UBERON:0001893!7.22e-12!29;UBERON:0007811!8.13e-12!86;UBERON:0000956!2.65e-07!21;UBERON:0001869!2.65e-07!21;UBERON:0000203!2.65e-07!21;UBERON:0002619!7.37e-07!17;UBERON:0003076!8.30e-07!12;UBERON:0003057!8.30e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.06e-29,73;UBERON:0001016,9.39e-29,75;UBERON:0004121,9.82e-28,95;UBERON:0000924,9.82e-28,95;UBERON:0006601,9.82e-28,95;UBERON:0002346,2.32e-24,64;UBERON:0003075,2.32e-24,64;UBERON:0007284,2.32e-24,64;UBERON:0010371,7.20e-21,73;UBERON:0000073,6.03e-20,54;UBERON:0001049,1.90e-18,52;UBERON:0005068,1.90e-18,52;UBERON:0006241,1.90e-18,52;UBERON:0007135,1.90e-18,52;UBERON:0003056,3.20e-16,49;UBERON:0002020,7.14e-16,34;UBERON:0010314,3.90e-15,92;UBERON:0000955,2.71e-14,47;UBERON:0006238,2.71e-14,47;UBERON:0002616,7.34e-14,46;UBERON:0003080,5.02e-12,40;UBERON:0003528,6.36e-12,29;UBERON:0002791,6.36e-12,29;UBERON:0001893,6.36e-12,29;UBERON:0002780,2.75e-11,39;UBERON:0001890,2.75e-11,39;UBERON:0006240,2.75e-11,39;UBERON:0003076,1.41e-07,12;UBERON:0003057,1.41e-07,12;UBERON:0002021,2.47e-07,10;UBERON:0000411,2.47e-07,10;UBERON:0001950,2.47e-07,10;UBERON:0002420,2.53e-07,8;UBERON:0007245,2.53e-07,8;UBERON:0010009,2.53e-07,8;UBERON:0010011,2.53e-07,8;UBERON:0000454,2.53e-07,8;UBERON:0002619,3.39e-07,17|phase1_expression=11.8510146857548,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,7.56885282344521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0.659058548203415,0.194429899074283,0.699932108126813,0,0,0,0,0,0,0,14.3644687210314,20.1016572123373,24.719424736741,0,1.77858959222228,0,0,0,3.89480143673926,1.53687322128622,0.933206510776299,0.675029691658453,1.68259969081106,15.996455126613,14.7981922437581,3.67472397644862,2.58782771749238,5.51531271966013,15.4162233399144,14.939418555967,14.7462271925994,12.0016521834476,11.3444678066988,7.8137005583514,12.2840519560608,20.8222165711722,13.7518422999129,30.3467443037878,18.9354335462807,16.5895506784518,0.681535739998656,1.20914496170857,0,0,0,0,0,0,0.421333260395256,0,0,0,4.08445917352373,0,0,0,0.216491041011214,0,0,0.45673551887624,0,0,1.04091196059682,1.52232739156071,0.230615497256059,0.150722640552623,0.587943535678524,0,0,0,0,0.485300549842228,0.220841518460394,0,0,133.215262640254,166.300685209883,0,0,0,0,20.3715269590559,23.33253074375,15.9581027183338,13.0368240144207,9.71718737855256,14.9607392082883,15.7374025175725,0.203678727700633,0,0,1.26265113531884,5.98554037628437,6.43725892413724,6.48223667299257,6.63101198477146,6.32739442107349,6.40568601424249,4.77878795254617,7.76110112217047,0.862271971731369,2.64748512234947,2.99116911078713,2.41115305670332,4.17070873838397,1.74126083261083,1.23469281844766,0.796137067273973,0,0,0,0.414251545071004,2.34526059981096,3.78130329068131,1.65721314909647,0.983821158737019,0.617068451549513,0,0,0.116765342367169,0.493679549740441,0.32833492815819,0.162137619091711,0.146199987425332,0,0,12.1968170167194,2.05809224758569,0,0,1.2797295032114,2.55460339046482,1.03093969057675,0.403367049246685,0.667134131534611,0.951128130562796,0,0.823494773620054,0.502670417600539,0,0.58489226135736,0,0.216138049874694,0,0.189667900953082,0.913988100877831,0,0.203651327845314,0.387904974335251,0.420814919341911,0.0632365371242573,0,0,0.123397163921801,0,0.333690211432188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.84237117655727,1.30371981153621,2.376431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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:14804 | |||
|HGNC= | |||
|MCL_coexpression_id=30 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q61625,uniprot:E0CZG1 | |||
|association_with_transcript=0bp_to_ENSMUST00000095852,ENSMUST00000159561_5end | |||
|cluster_id=chr6:63205965..63206030,+ | |||
|description=CAGE_peak_1_at_Grid2_5end | |||
|id=chr6:63205965..63206030,+ | |||
|ontology_enrichment_celltype=CL:0000540!4.62e-17!33;CL:0000047!4.62e-17!33;CL:0000031!4.62e-17!33;CL:0000404!4.62e-17!33;CL:0000221!9.99e-15!44;CL:0000133!9.99e-15!44;CL:0002319!1.98e-14!43;CL:0000117!3.33e-12!23;CL:0000337!3.33e-12!23;CL:0000393!1.53e-11!39;CL:0000211!1.53e-11!39;CL:0000055!1.22e-09!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,4.67e-19,33;CL:0000047,4.67e-19,33;CL:0000031,4.67e-19,33;CL:0000404,4.67e-19,33;CL:0000221,2.89e-14,44;CL:0000133,2.89e-14,44;CL:0000393,4.50e-14,39;CL:0000211,4.50e-14,39;CL:0002319,6.59e-14,43;CL:0000117,4.25e-13,23;CL:0000337,4.25e-13,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.67e-29!73;UBERON:0005743!3.67e-29!73;UBERON:0000073!4.02e-29!75;UBERON:0001016!4.02e-29!75;UBERON:0004121!2.50e-26!102;UBERON:0000924!2.50e-26!102;UBERON:0006601!2.50e-26!102;UBERON:0002346!3.96e-22!71;UBERON:0003075!3.96e-22!71;UBERON:0007284!3.96e-22!71;UBERON:0000033!1.73e-21!63;UBERON:0001049!1.57e-19!52;UBERON:0005068!1.57e-19!52;UBERON:0006241!1.57e-19!52;UBERON:0007135!1.57e-19!52;UBERON:0000955!9.87e-18!50;UBERON:0006238!9.87e-18!50;UBERON:0002616!2.37e-17!49;UBERON:0003056!3.18e-17!49;UBERON:0002020!3.25e-15!34;UBERON:0003080!1.29e-13!40;UBERON:0002780!6.03e-13!39;UBERON:0001890!6.03e-13!39;UBERON:0006240!6.03e-13!39;UBERON:0000153!1.16e-12!94;UBERON:0002791!7.22e-12!29;UBERON:0003528!7.22e-12!29;UBERON:0001893!7.22e-12!29;UBERON:0007811!8.13e-12!86;UBERON:0000956!2.65e-07!21;UBERON:0001869!2.65e-07!21;UBERON:0000203!2.65e-07!21;UBERON:0002619!7.37e-07!17;UBERON:0003076!8.30e-07!12;UBERON:0003057!8.30e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.06e-29,73;UBERON:0001016,9.39e-29,75;UBERON:0004121,9.82e-28,95;UBERON:0000924,9.82e-28,95;UBERON:0006601,9.82e-28,95;UBERON:0002346,2.32e-24,64;UBERON:0003075,2.32e-24,64;UBERON:0007284,2.32e-24,64;UBERON:0010371,7.20e-21,73;UBERON:0000073,6.03e-20,54;UBERON:0001049,1.90e-18,52;UBERON:0005068,1.90e-18,52;UBERON:0006241,1.90e-18,52;UBERON:0007135,1.90e-18,52;UBERON:0003056,3.20e-16,49;UBERON:0002020,7.14e-16,34;UBERON:0010314,3.90e-15,92;UBERON:0000955,2.71e-14,47;UBERON:0006238,2.71e-14,47;UBERON:0002616,7.34e-14,46;UBERON:0003080,5.02e-12,40;UBERON:0003528,6.36e-12,29;UBERON:0002791,6.36e-12,29;UBERON:0001893,6.36e-12,29;UBERON:0002780,2.75e-11,39;UBERON:0001890,2.75e-11,39;UBERON:0006240,2.75e-11,39;UBERON:0003076,1.41e-07,12;UBERON:0003057,1.41e-07,12;UBERON:0002021,2.47e-07,10;UBERON:0000411,2.47e-07,10;UBERON:0001950,2.47e-07,10;UBERON:0002420,2.53e-07,8;UBERON:0007245,2.53e-07,8;UBERON:0010009,2.53e-07,8;UBERON:0010011,2.53e-07,8;UBERON:0000454,2.53e-07,8;UBERON:0002619,3.39e-07,17 | |||
|phase1_expression=11.8510146857548,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,7.56885282344521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0.659058548203415,0.194429899074283,0.699932108126813,0,0,0,0,0,0,0,14.3644687210314,20.1016572123373,24.719424736741,0,1.77858959222228,0,0,0,3.89480143673926,1.53687322128622,0.933206510776299,0.675029691658453,1.68259969081106,15.996455126613,14.7981922437581,3.67472397644862,2.58782771749238,5.51531271966013,15.4162233399144,14.939418555967,14.7462271925994,12.0016521834476,11.3444678066988,7.8137005583514,12.2840519560608,20.8222165711722,13.7518422999129,30.3467443037878,18.9354335462807,16.5895506784518,0.681535739998656,1.20914496170857,0,0,0,0,0,0,0.421333260395256,0,0,0,4.08445917352373,0,0,0,0.216491041011214,0,0,0.45673551887624,0,0,1.04091196059682,1.52232739156071,0.230615497256059,0.150722640552623,0.587943535678524,0,0,0,0,0.485300549842228,0.220841518460394,0,0,133.215262640254,166.300685209883,0,0,0,0,20.3715269590559,23.33253074375,15.9581027183338,13.0368240144207,9.71718737855256,14.9607392082883,15.7374025175725,0.203678727700633,0,0,1.26265113531884,5.98554037628437,6.43725892413724,6.48223667299257,6.63101198477146,6.32739442107349,6.40568601424249,4.77878795254617,7.76110112217047,0.862271971731369,2.64748512234947,2.99116911078713,2.41115305670332,4.17070873838397,1.74126083261083,1.23469281844766,0.796137067273973,0,0,0,0.414251545071004,2.34526059981096,3.78130329068131,1.65721314909647,0.983821158737019,0.617068451549513,0,0,0.116765342367169,0.493679549740441,0.32833492815819,0.162137619091711,0.146199987425332,0,0,12.1968170167194,2.05809224758569,0,0,1.2797295032114,2.55460339046482,1.03093969057675,0.403367049246685,0.667134131534611,0.951128130562796,0,0.823494773620054,0.502670417600539,0,0.58489226135736,0,0.216138049874694,0,0.189667900953082,0.913988100877831,0,0.203651327845314,0.387904974335251,0.420814919341911,0.0632365371242573,0,0,0.123397163921801,0,0.333690211432188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.84237117655727,1.30371981153621,2.37643120085263,2.34690248288502,1.50755631697634,0.952174563544055,0.585400943573396,1.41871629695572,0.8858587585951,0.797273843287435,0.327726629431476,0,0.144649058581512,0,0,0,0,19.9082731584862,17.2301179290539,0,0.757412781613119,4.73262329124385,2.34263246577983,6.89354872744957,14.3381278771531,14.0363164671908,16.9845918473299,7.69140333182299,8.18316402151673,7.90575555893047,4.81981974632711,0,0.35613120733451,1.14020871547503,0,0,0.242780636154981,0,0.188605079755898,0,0,1.03371317267288,0.363533729477506,0.356497378384721,0,0,0,2.04263763452273,1.62054984628179,0.388076051348264,0.643011105094777,2.6601035046341,0.713475270408282,1.31639216481697,0.913394847343798,0,0,0,0,0.645857706783622,0.482503399425247,0.119372344003136,0,0,15.9465759729038,0,4.74689796315412,4.07427960213366,1.13021074202815,0,0.228778173206523,0,0,0,0,2.37251995185852,3.45643094115643,1.62008011232702,0.836353184057875,1.31017538247707,0.539457385539283,0.330613822901344,0,0,0.621339313086926,0,0.299033092087958,0.66183396182839,0.194451188344048,0,0.337912250981556,0.352071715937262,0,0,0,0,0,0.810900861160657,0.102710957164827,0.25984164595559,0.179026695667481,0.39736270956253,0.240390899039938,0.295379054349154,0.302899349844443,0.0762068066549998,0,0,0.0962118416403295,0.233753804363138,0,0,0.0897138566094757,0,0.19318959403219,0,0,0,0,11.8597886949584,11.9684561491866,13.7494923225455,9.10821866421544,7.53590771747707,9.82012066606611,11.4753825039407,5.85417564191487,7.70342095273148,5.1776031175182,1.14166082342594,6.78342284781753,3.75613932659095,5.34834777550247,1.67690530102386,1.65459157605013,4.4449345560323,4.53277125925567,6.09746498224449,4.29585259998456,7.35089969681695,6.22466926574051,3.7456602987953,4.60981097315059,4.36509564062661,6.19181798667996,3.94006708212509,3.6652751888104,2.47251540481984,4.71036544430071,3.42869252385415,2.30718548007139,2.86123427936785,4.94177816549917,6.30532848782715,4.73841804193388,5.12198324043763,3.15683653725411,2.98769050460896,5.61142271657738,4.50813068871862,3.34915240076916,3.6830793885272,4.33823155320705,5.40138510747196,4.99621155875892,3.27504251823572,4.08255002691767,1.91288332068843,0.441182838239031,2.31867835620421 | |||
|short_description=p1@Grid2 | |||
}} |
Revision as of 00:36, 6 August 2015
Short description: | p1@Grid2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Grid2_5end |
Coexpression cluster: | MCL_coexpression_mm9:30 |
Association with transcript: | 0bp_to_ENSMUST00000095852, ENSMUST00000159561_5end |
EntrezGene: | 14804 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 4.67e-19 | 33 |
neuronal stem cell | 4.67e-19 | 33 |
neuroblast | 4.67e-19 | 33 |
electrically signaling cell | 4.67e-19 | 33 |
ectodermal cell | 2.89e-14 | 44 |
neurectodermal cell | 2.89e-14 | 44 |
electrically responsive cell | 4.50e-14 | 39 |
electrically active cell | 4.50e-14 | 39 |
neural cell | 6.59e-14 | 43 |
CNS neuron (sensu Vertebrata) | 4.25e-13 | 23 |
neuroblast (sensu Vertebrata) | 4.25e-13 | 23 |