FFCP PHASE1:Mm9::chr8:120807644..120807667,+: Difference between revisions
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{{FFCP|EntrezGene=12554|HGNC=|MCL_coexpression_id=3659|UniProt=Q9WTR5,Q8BS79,Q8CE18|association_with_transcript=0bp_to_ENSMUST00000145849,NM_019707,uc009nph.1,uc009npi.1,uc009npj.1,uc009npk.1,uc009npl.1_5end|description=CAGE_peak_3_at_Cdh13_5end|id=chr8:120807644..120807667,+|ontology_enrichment_celltype=CL:0000117!6.30e-09!23;CL:0000337!6.30e-09!23|ontology_enrichment_celltype_v019_2=CL:0000117,2.24e-09,23;CL:0000337,2.24e-09,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!2.20e-12!52;UBERON:0005068!2.20e-12!52;UBERON:0006241!2.20e-12!52;UBERON:0007135!2.20e-12!52;UBERON:0002020!7.15e-12!34;UBERON:0004121!1.89e-11!102;UBERON:0000924!1.89e-11!102;UBERON:0006601!1.89e-11!102;UBERON:0001017!2.52e-11!73;UBERON:0005743!2.52e-11!73;UBERON:0000073!4.15e-11!75;UBERON:0001016!4.15e-11!75;UBERON:0000955!2.08e-10!50;UBERON:0006238!2.08e-10!50;UBERON:0002616!3.05e-10!49;UBERON:0002346!7.22e-10!71;UBERON:0003075!7.22e-10!71;UBERON:0007284!7.22e-10!71;UBERON:0002791!1.41e-09!29;UBERON:0003528!1.41e-09!29;UBERON:0001893!1.41e-09!29;UBERON:0003080!1.52e-09!40;UBERON:0000033!1.61e-09!63;UBERON:0003056!3.08e-09!49;UBERON:0004111!4.26e-09!122;UBERON:0002780!5.05e-09!39;UBERON:0001890!5.05e-09!39;UBERON:0006240!5.05e-09!39;UBERON:0000025!5.21e-09!114;UBERON:0000956!1.06e-07!21;UBERON:0001869!1.06e-07!21;UBERON:0000203!1.06e-07!21;UBERON:0000479!2.27e-07!349;UBERON:0007100!2.43e-07!18;UBERON:0000948!2.43e-07!18;UBERON:0005498!2.43e-07!18;UBERON:0004140!2.43e-07!18;UBERON:0009881!2.43e-07!18;UBERON:0004141!2.43e-07!18;UBERON:0003084!2.43e-07!18;UBERON:0007005!2.43e-07!18;UBERON:0004139!2.43e-07!18;UBERON:0004291!2.43e-07!18|ontology_enrichment_uberon_v019_2=UBERON:0010314,4.51e-15,92;UBERON:0010371,8.70e-13,73;UBERON:0004121,1.25e-12,95;UBERON:0000924,1.25e-12,95;UBERON:0006601,1.25e-12,95;UBERON:0000073,1.26e-12,54;UBERON:0001049,1.46e-12,52;UBERON:0005068,1.46e-12,52;UBERON:0006241,1.46e-12,52;UBERON:0007135,1.46e-12,52;UBERON:0002020,1.68e-12,34;UBERON:0002346,1.21e-11,64;UBERON:0003075,1.21e-11,64;UBERON:0007284,1.21e-11,64;UBERON:0001017,5.72e-11,73;UBERON:0001016,9.26e-11,75;UBERON:0003528,4.57e-10,29;UBERON:0002791,4.57e-10,29;UBERON:0001893,4.57e-10,29;UBERON:0003080,6.17e-10,40;UBERON:0000955,6.27e-10,47;UBERON:0006238,6.27e-10,47;UBERON:0002616,9.36e-10,46;UBERON:0003056,2.10e-09,49;UBERON:0002780,2.19e-09,39;UBERON:0001890,2.19e-09,39;UBERON:0006240,2.19e-09,39;UBERON:0000956,4.46e-08,21;UBERON:0001869,4.46e-08,21;UBERON:0000203,4.46e-08,21;UBERON:0004111,5.01e-08,122;UBERON:0000025,6.51e-08,114;UBERON:0007100,1.08e-07,18;UBERON:0000948,1.08e-07,18;UBERON:0005498,1.08e-07,18;UBERON:0004140,1.08e-07,18;UBERON:0009881,1.08e-07,18;UBERON:0004141,1.08e-07,18;UBERON:0003084,1.08e-07,18;UBERON:0007005,1.08e-07,18;UBERON:0004139,1.08e-07,18;UBERON:0004291,1.08e-07,18|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.72138528483423,7.54611229126728,4.70159620450084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0.782391344348039,5.88667922227206,5.93152693383074,7.58276606389705,2.51975558925653,1.43752564364972,0,0,0,1.02903774414379,1.43266719969378,4.12537673821954,12.3413041124355,14.8117474196169,13.3104594736298,0.677689064138264,0,0.449949858640699,0,0.7104801149461,1.49800055259202,3.07374644257244,13.5833392124106,16.0657066614712,13.6711224878398,13.139945282575,12.8103753751936,10.2892271340561,7.85932862349538,8.27296907949019,3.30347642998166,7.66124028511126,8.29475279583715,7.38563211289086,11.0700048758916,7.29278718779464,6.42120897703176,5.6276261003168,6.57032465440283,12.374400589894,13.5253096759148,10.2519695203915,1.36307147999731,1.66257432234928,45.5087247261634,1.72084775396277,0,0,0,0,5.19644354487482,16.8726019352277,6.49465011507172,7.0667914902068,0,0,0,0,2.81438353314578,4.05375784760158,3.0331466700887,1.48439043634778,1.55362730188303,1.33597925158342,0.693941307064543,0.913396434936424,0.461230994512117,0.452167921657868,1.17588707135705,1.25666591329675,1.23597483867187,13.7369389073916,4.42305275974937,18.9267214438469,9.05450225687614,6.30337829075789,0,0.292780797011547,2.72280718857492,0.766371165625774,0,0,0,15.5782264981016,6.40500843946077,16.3350657746724,11.9938780932671,9.97290283588289,14.3373750746096,15.8996437806402,1.93494791315601,5.72272064806428,0.758168275301024,2.52530227063769,0.650602214813519,1.60931473103431,2.16074555766419,4.52114453507145,3.6739709541717,3.71529788826064,3.65436725782942,2.84573707812917,0.646703978798527,2.08016688184601,3.34307135911503,1.31517439456545,3.33656699070717,10.0993128291428,8.23128545631774,0.199034266818493,0,0,0.284163499395593,3.31401236056803,6.80125573945179,5.94204802821349,10.4167683657493,12.3961466000864,13.2669717083145,13.7195027402741,12.8771232671817,15.5297905348335,17.7724637906559,27.580133965288,25.2123997687611,23.2457980006278,20.4181607220677,31.1358891524062,5.46753866266731,9.77593817603202,0,0.528901133327089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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:12554 | |||
|HGNC= | |||
|MCL_coexpression_id=3659 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9WTR5,uniprot:Q8BS79,uniprot:Q8CE18 | |||
|association_with_transcript=0bp_to_ENSMUST00000145849,NM_019707,uc009nph.1,uc009npi.1,uc009npj.1,uc009npk.1,uc009npl.1_5end | |||
|cluster_id=chr8:120807644..120807667,+ | |||
|description=CAGE_peak_3_at_Cdh13_5end | |||
|id=chr8:120807644..120807667,+ | |||
|ontology_enrichment_celltype=CL:0000117!6.30e-09!23;CL:0000337!6.30e-09!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.24e-09,23;CL:0000337,2.24e-09,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.20e-12!52;UBERON:0005068!2.20e-12!52;UBERON:0006241!2.20e-12!52;UBERON:0007135!2.20e-12!52;UBERON:0002020!7.15e-12!34;UBERON:0004121!1.89e-11!102;UBERON:0000924!1.89e-11!102;UBERON:0006601!1.89e-11!102;UBERON:0001017!2.52e-11!73;UBERON:0005743!2.52e-11!73;UBERON:0000073!4.15e-11!75;UBERON:0001016!4.15e-11!75;UBERON:0000955!2.08e-10!50;UBERON:0006238!2.08e-10!50;UBERON:0002616!3.05e-10!49;UBERON:0002346!7.22e-10!71;UBERON:0003075!7.22e-10!71;UBERON:0007284!7.22e-10!71;UBERON:0002791!1.41e-09!29;UBERON:0003528!1.41e-09!29;UBERON:0001893!1.41e-09!29;UBERON:0003080!1.52e-09!40;UBERON:0000033!1.61e-09!63;UBERON:0003056!3.08e-09!49;UBERON:0004111!4.26e-09!122;UBERON:0002780!5.05e-09!39;UBERON:0001890!5.05e-09!39;UBERON:0006240!5.05e-09!39;UBERON:0000025!5.21e-09!114;UBERON:0000956!1.06e-07!21;UBERON:0001869!1.06e-07!21;UBERON:0000203!1.06e-07!21;UBERON:0000479!2.27e-07!349;UBERON:0007100!2.43e-07!18;UBERON:0000948!2.43e-07!18;UBERON:0005498!2.43e-07!18;UBERON:0004140!2.43e-07!18;UBERON:0009881!2.43e-07!18;UBERON:0004141!2.43e-07!18;UBERON:0003084!2.43e-07!18;UBERON:0007005!2.43e-07!18;UBERON:0004139!2.43e-07!18;UBERON:0004291!2.43e-07!18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,4.51e-15,92;UBERON:0010371,8.70e-13,73;UBERON:0004121,1.25e-12,95;UBERON:0000924,1.25e-12,95;UBERON:0006601,1.25e-12,95;UBERON:0000073,1.26e-12,54;UBERON:0001049,1.46e-12,52;UBERON:0005068,1.46e-12,52;UBERON:0006241,1.46e-12,52;UBERON:0007135,1.46e-12,52;UBERON:0002020,1.68e-12,34;UBERON:0002346,1.21e-11,64;UBERON:0003075,1.21e-11,64;UBERON:0007284,1.21e-11,64;UBERON:0001017,5.72e-11,73;UBERON:0001016,9.26e-11,75;UBERON:0003528,4.57e-10,29;UBERON:0002791,4.57e-10,29;UBERON:0001893,4.57e-10,29;UBERON:0003080,6.17e-10,40;UBERON:0000955,6.27e-10,47;UBERON:0006238,6.27e-10,47;UBERON:0002616,9.36e-10,46;UBERON:0003056,2.10e-09,49;UBERON:0002780,2.19e-09,39;UBERON:0001890,2.19e-09,39;UBERON:0006240,2.19e-09,39;UBERON:0000956,4.46e-08,21;UBERON:0001869,4.46e-08,21;UBERON:0000203,4.46e-08,21;UBERON:0004111,5.01e-08,122;UBERON:0000025,6.51e-08,114;UBERON:0007100,1.08e-07,18;UBERON:0000948,1.08e-07,18;UBERON:0005498,1.08e-07,18;UBERON:0004140,1.08e-07,18;UBERON:0009881,1.08e-07,18;UBERON:0004141,1.08e-07,18;UBERON:0003084,1.08e-07,18;UBERON:0007005,1.08e-07,18;UBERON:0004139,1.08e-07,18;UBERON:0004291,1.08e-07,18 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.72138528483423,7.54611229126728,4.70159620450084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0.782391344348039,5.88667922227206,5.93152693383074,7.58276606389705,2.51975558925653,1.43752564364972,0,0,0,1.02903774414379,1.43266719969378,4.12537673821954,12.3413041124355,14.8117474196169,13.3104594736298,0.677689064138264,0,0.449949858640699,0,0.7104801149461,1.49800055259202,3.07374644257244,13.5833392124106,16.0657066614712,13.6711224878398,13.139945282575,12.8103753751936,10.2892271340561,7.85932862349538,8.27296907949019,3.30347642998166,7.66124028511126,8.29475279583715,7.38563211289086,11.0700048758916,7.29278718779464,6.42120897703176,5.6276261003168,6.57032465440283,12.374400589894,13.5253096759148,10.2519695203915,1.36307147999731,1.66257432234928,45.5087247261634,1.72084775396277,0,0,0,0,5.19644354487482,16.8726019352277,6.49465011507172,7.0667914902068,0,0,0,0,2.81438353314578,4.05375784760158,3.0331466700887,1.48439043634778,1.55362730188303,1.33597925158342,0.693941307064543,0.913396434936424,0.461230994512117,0.452167921657868,1.17588707135705,1.25666591329675,1.23597483867187,13.7369389073916,4.42305275974937,18.9267214438469,9.05450225687614,6.30337829075789,0,0.292780797011547,2.72280718857492,0.766371165625774,0,0,0,15.5782264981016,6.40500843946077,16.3350657746724,11.9938780932671,9.97290283588289,14.3373750746096,15.8996437806402,1.93494791315601,5.72272064806428,0.758168275301024,2.52530227063769,0.650602214813519,1.60931473103431,2.16074555766419,4.52114453507145,3.6739709541717,3.71529788826064,3.65436725782942,2.84573707812917,0.646703978798527,2.08016688184601,3.34307135911503,1.31517439456545,3.33656699070717,10.0993128291428,8.23128545631774,0.199034266818493,0,0,0.284163499395593,3.31401236056803,6.80125573945179,5.94204802821349,10.4167683657493,12.3961466000864,13.2669717083145,13.7195027402741,12.8771232671817,15.5297905348335,17.7724637906559,27.580133965288,25.2123997687611,23.2457980006278,20.4181607220677,31.1358891524062,5.46753866266731,9.77593817603202,0,0.528901133327089,2.34617075588757,3.25131340604614,1.41754207454303,1.00841762311671,0.667134131534611,0.190225626112559,0.474529061544512,1.4822905925161,1.25667604400135,1.98956472041151,1.75467678407208,0.898819408654221,1.08069024937347,0.995706366271836,0.758671603812327,0.456994050438915,0,1.01825663922657,0.387904974335251,0.420814919341911,0.505892296994058,1.32849133181642,0.627994911365499,2.22114895059241,0.592905254174298,0.333690211432188,0.196558995113203,0.224862112384854,0.202860121388503,0.482354319504834,0.25462585178142,0.287696137450811,0.486405680325106,0.549122826376163,0,0.744281895337007,0.624075346229121,0.505157755894224,1.4351793081753,0.482443521363367,5.72734889516475,0.568474235311454,0.977789858652155,0.678980343100753,0.469380496577004,1.00503754465089,1.6663054862021,1.75620283072019,2.36452716159286,3.32197034473162,1.91345722388985,5.07976275618788,2.07221978239075,5.35201516751593,0,0,7.37646409528554,8.55403913544671,12.2018448390722,14.0654023910644,0,34.3360460997947,1.26203287766503,2.34263246577983,1.29254038639679,0,0.668396022247182,1.13230612315533,0.404810701674894,1.75353514746787,0.790575555893047,6.10510501201433,2.12910127812403,1.42452482933804,0.977321756121456,4.78413356620353,1.32745138339963,0.242780636154981,0,1.13163047853539,1.47650946440386,1.84461088766356,2.06742634534577,1.09060118843252,2.13898427030833,1.26414703174326,0,2.06271086496374,0.340439605753788,1.44048875225048,1.29358683782755,2.7863814554107,1.06404140185364,2.14042581122485,2.13913726782757,4.26250928760439,2.81606049676452,3.1774810629573,2.8668691747145,9.8931751764888,13.0786185623683,9.89131968821756,8.11731939221328,6.40149509005739,0.291480836629851,13.9068976507882,0,0.619160603889667,0.555583582109135,0,0.136694227721025,0,0,0,0,1.90934123603023,0.158167996790568,2.64315307264903,2.16010681643603,2.29997125615916,3.05707589244649,4.18079473792944,3.80205896336545,2.87931536182433,1.29614973291793,1.24267862617385,0,0.149516546043979,0.165458490457098,0.583353565032143,0.387479470433193,0,0.58678619322877,0.39061315453185,0.419437377702843,0.241584120826006,2.88030006257865,0.316011120628178,0.405450430580328,0.821687657318618,0.649604114888975,1.61124026100733,1.39076948346885,1.08175904567972,0.590758108698309,0.403865799792591,0.533447646584999,0.504130925684203,0.779663045918019,0.0962118416403295,0,14.7374749349887,0,0,0,8.50034213741638,5.2551093126331,3.84618410961257,8.1459984050045,1.00314420807073,15.2482997506608,14.2700823317225,16.0410743763031,15.1230800462445,3.42541259885321,6.7985450765073,4.72515750162264,5.85417564191487,6.79713613476307,8.28416498802912,0.830298780673413,3.59122386060928,3.75613932659095,6.07766792670735,1.88651846365184,1.65459157605013,10.4455962066759,9.47761263298913,12.5158491740808,7.83361356467772,10.1391719956096,9.61994341068989,9.73871677686777,9.8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| |||
|short_description=p3@Cdh13 | |||
}} |
Revision as of 00:30, 6 August 2015
Short description: | p3@Cdh13 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Cdh13_5end |
Coexpression cluster: | MCL_coexpression_mm9:3659 |
Association with transcript: | 0bp_to_ENSMUST00000145849, NM_019707, uc009nph.1, uc009npi.1, uc009npj.1, uc009npk.1, uc009npl.1_5end |
EntrezGene: | 12554 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.24e-09 | 23 |
neuroblast (sensu Vertebrata) | 2.24e-09 | 23 |