FFCP PHASE1:Mm9::chr8:120807488..120807502,+: Difference between revisions
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{{FFCP|EntrezGene=12554|HGNC=|MCL_coexpression_id=3658|UniProt=Q9WTR5|association_with_transcript=-130bp_to_ENSMUST00000117160_5end|description=CAGE_peak_5_at_Cdh13_5end|id=chr8:120807488..120807502,+|ontology_enrichment_celltype=CL:0000117!2.41e-13!23;CL:0000337!2.41e-13!23|ontology_enrichment_celltype_v019_2=CL:0000117,1.72e-19,23;CL:0000337,1.72e-19,23;CL:0000540,1.35e-11,33;CL:0000047,1.35e-11,33;CL:0000031,1.35e-11,33;CL:0000404,1.35e-11,33;CL:0002609,3.11e-09,6;CL:0000393,7.11e-09,39;CL:0000211,7.11e-09,39;CL:0002319,1.59e-08,43;CL:0000221,3.42e-08,44;CL:0000133,3.42e-08,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!3.07e-17!34;UBERON:0001049!1.60e-14!52;UBERON:0005068!1.60e-14!52;UBERON:0006241!1.60e-14!52;UBERON:0007135!1.60e-14!52;UBERON:0002791!1.65e-13!29;UBERON:0003528!1.65e-13!29;UBERON:0001893!1.65e-13!29;UBERON:0000955!1.15e-12!50;UBERON:0006238!1.15e-12!50;UBERON:0001017!1.99e-12!73;UBERON:0005743!1.99e-12!73;UBERON:0000073!2.19e-12!75;UBERON:0001016!2.19e-12!75;UBERON:0002616!2.96e-12!49;UBERON:0003080!1.27e-11!40;UBERON:0000956!4.32e-11!21;UBERON:0001869!4.32e-11!21;UBERON:0000203!4.32e-11!21;UBERON:0002780!5.28e-11!39;UBERON:0001890!5.28e-11!39;UBERON:0006240!5.28e-11!39;UBERON:0004121!6.88e-11!102;UBERON:0000924!6.88e-11!102;UBERON:0006601!6.88e-11!102;UBERON:0000033!1.37e-10!63;UBERON:0003056!1.53e-10!49;UBERON:0002346!1.71e-10!71;UBERON:0003075!1.71e-10!71;UBERON:0007284!1.71e-10!71;UBERON:0002619!3.11e-08!17;UBERON:0000025!4.23e-08!114;UBERON:0004111!1.52e-07!122|ontology_enrichment_uberon_v019_2=UBERON:0002020,6.49e-23,34;UBERON:0000073,4.39e-20,54;UBERON:0001049,1.89e-19,52;UBERON:0005068,1.89e-19,52;UBERON:0006241,1.89e-19,52;UBERON:0007135,1.89e-19,52;UBERON:0001017,2.68e-17,73;UBERON:0003528,6.79e-17,29;UBERON:0002791,6.79e-17,29;UBERON:0001893,6.79e-17,29;UBERON:0001016,1.64e-16,75;UBERON:0002346,7.85e-15,64;UBERON:0003075,7.85e-15,64;UBERON:0007284,7.85e-15,64;UBERON:0003080,2.11e-14,40;UBERON:0000955,2.36e-14,47;UBERON:0006238,2.36e-14,47;UBERON:0010314,2.85e-14,92;UBERON:0002616,1.02e-13,46;UBERON:0002780,1.92e-13,39;UBERON:0001890,1.92e-13,39;UBERON:0006240,1.92e-13,39;UBERON:0000956,3.13e-13,21;UBERON:0001869,3.13e-13,21;UBERON:0000203,3.13e-13,21;UBERON:0010371,1.30e-12,73;UBERON:0004121,4.21e-12,95;UBERON:0000924,4.21e-12,95;UBERON:0006601,4.21e-12,95;UBERON:0003056,2.75e-11,49;UBERON:0000025,8.88e-10,114;UBERON:0002619,8.87e-09,17;UBERON:0004111,2.35e-08,122;UBERON:0002240,2.62e-08,6;UBERON:0005174,2.62e-08,6;UBERON:0001137,2.62e-08,6;UBERON:0001948,7.54e-08,5;UBERON:0002315,7.54e-08,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,1.48936426801328,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872100625521786,0.878744730937887,2.13872888981712,0.419959264876088,0,0,0,0,0,0,0,2.02316460859598,1.5869729378161,2.53532561402472,0,0,0,0,0,0.898800331555214,0,4.56234294157302,3.37514845829227,4.20649922702764,3.42781181284564,3.75476519617743,3.06226998037385,3.45043695665651,8.27296907949019,3.30347642998166,0.893811366596314,1.38245879930619,1.58263545276233,1.18933936683133,1.56274011167028,0,0.56276261003168,1.06958773443767,4.12480019663135,5.26775218956681,2.42319279572891,0.075726193333184,0.226714680320357,1.15945795480671,0,0,0,0,0,0.280888840263504,0.852151612890289,0.519572009205738,0.70667914902068,0,0,0,0,0.216491041011214,0,0,0.11418387971906,0,0.148442139064825,0,0,0,0.150722640552623,0,0.125666591329675,0,1.3013942122792,0,0.970601099684455,0.883366073841574,0,0,0,0,0,0,0,0,2.54644086988199,3.66000482254901,14.827213549318,2.78118912307642,2.04572365864264,1.45451631191692,3.73154905055843,0.101839363850316,0.124406970610093,0,0,0.260240885925407,0,0,0.60281927134286,0.340182495756639,0.12811372028485,0.468508622798644,1.29351685369508,0,0.567318240503458,0.175951124163949,0.219195732427575,0.278047249225598,0.348252166522167,1.23469281844766,0,0,0,0,0.828503090142008,0.703578179943289,1.08037236876609,0.710234206755631,1.18058539048442,1.85120535464854,1.86027155800326,1.3413670069981,1.86824547787471,1.15191894939436,1.97000956894914,0.972825714550269,0.877199924551994,1.3173006917463,0.939444931322602,1.05144974282064,2.46971069710283,0,0,0,0.232236671860439,0,0.201683524623343,0,0.190225626112559,0,0,0,0.198956472041151,0.19496408711912,0,0,0,0,0.456994050438915,0,0,0.193952487167626,0,0,0,0.31399745568275,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0.372140947668503,0,0,0,0.482443521363367,0.184753190166605,0.189491411770485,0.325929952884052,0,0,0,0,0.195133647857799,0.630540576424764,0,0.159454768657487,0,0,0.289298117163023,0,0,0.983528546038072,0.275936746304732,1.9266070798535,1.05490517932983,0,0.757412781613119,0,0.390438744296638,0,0,0,0,0,0,0,1.28528526568723,0,0,0.162886959353576,0.329940245945071,0,0,0,0,0,0.614870295887855,0.258428293168221,0,0.356497378384721,0.316036757935816,0,0,0,0,0.258717367565509,0,0,0.356737635204141,0.658196082408484,0,0,0,0.220528398054962,1.31909002353184,0.645857706783622,0.663442174209714,0.358117032009409,0.164140899745061,0,1.11255181206306,0,0,0,0,0,0,0,0,0,0,0,0.406638934253697,0.432021363287205,0.209088296014469,0.218362563746178,0.404593039154462,0.826534557253359,0.26175594198403,0.259229946583586,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0.102710957164827,0,0.179026695667481,0,0.120195449519969,0,0.100966449948148,0.0762068066549998,0,0,0,0,0.906921534460845,0,0,0,0.19318959403219,0.187682475451182,0.36630324853453,0.428736758158132,0,1.6942555278512,1.38097570952153,2.29158205375759,2.23409137046794,2.05524755931193,2.2661816921691,0.675022500231806,0.900642406448441,0.453142408984205,0,0.103787347584177,0,0.170733605754134,1.45864030240976,0,0.183843508450014,1.11123363900808,1.03017528619447,0.64183841918363,3.28506375292937,2.5347929989024,2.26351609663291,1.03005658216871,0.960377286073039,1.26358031702349,0,1.15884325944855,1.54327376370964,1.64834360321323,1.32479028120958,1.02860775715625,0.177475806159338,1.43061713968393,0.872078499793971,1.31753132581463,0.846146078916765,1.82927972872773,1.31534855718921,1.35804113845862,0.561142271657738,1.06771516311757,0.886540341380071,1.22769312950907,0.619747364743864,1.73615949883027,1.99848462350357,1.63752125911786,0.429742108096597,1.53030665655075,1.32354851471709,0.463735671240843|short_description=p5@Cdh13}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:12554 | |||
|HGNC= | |||
|MCL_coexpression_id=3658 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9WTR5 | |||
|association_with_transcript=-130bp_to_ENSMUST00000117160_5end | |||
|cluster_id=chr8:120807488..120807502,+ | |||
|description=CAGE_peak_5_at_Cdh13_5end | |||
|id=chr8:120807488..120807502,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.41e-13!23;CL:0000337!2.41e-13!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.72e-19,23;CL:0000337,1.72e-19,23;CL:0000540,1.35e-11,33;CL:0000047,1.35e-11,33;CL:0000031,1.35e-11,33;CL:0000404,1.35e-11,33;CL:0002609,3.11e-09,6;CL:0000393,7.11e-09,39;CL:0000211,7.11e-09,39;CL:0002319,1.59e-08,43;CL:0000221,3.42e-08,44;CL:0000133,3.42e-08,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!3.07e-17!34;UBERON:0001049!1.60e-14!52;UBERON:0005068!1.60e-14!52;UBERON:0006241!1.60e-14!52;UBERON:0007135!1.60e-14!52;UBERON:0002791!1.65e-13!29;UBERON:0003528!1.65e-13!29;UBERON:0001893!1.65e-13!29;UBERON:0000955!1.15e-12!50;UBERON:0006238!1.15e-12!50;UBERON:0001017!1.99e-12!73;UBERON:0005743!1.99e-12!73;UBERON:0000073!2.19e-12!75;UBERON:0001016!2.19e-12!75;UBERON:0002616!2.96e-12!49;UBERON:0003080!1.27e-11!40;UBERON:0000956!4.32e-11!21;UBERON:0001869!4.32e-11!21;UBERON:0000203!4.32e-11!21;UBERON:0002780!5.28e-11!39;UBERON:0001890!5.28e-11!39;UBERON:0006240!5.28e-11!39;UBERON:0004121!6.88e-11!102;UBERON:0000924!6.88e-11!102;UBERON:0006601!6.88e-11!102;UBERON:0000033!1.37e-10!63;UBERON:0003056!1.53e-10!49;UBERON:0002346!1.71e-10!71;UBERON:0003075!1.71e-10!71;UBERON:0007284!1.71e-10!71;UBERON:0002619!3.11e-08!17;UBERON:0000025!4.23e-08!114;UBERON:0004111!1.52e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,6.49e-23,34;UBERON:0000073,4.39e-20,54;UBERON:0001049,1.89e-19,52;UBERON:0005068,1.89e-19,52;UBERON:0006241,1.89e-19,52;UBERON:0007135,1.89e-19,52;UBERON:0001017,2.68e-17,73;UBERON:0003528,6.79e-17,29;UBERON:0002791,6.79e-17,29;UBERON:0001893,6.79e-17,29;UBERON:0001016,1.64e-16,75;UBERON:0002346,7.85e-15,64;UBERON:0003075,7.85e-15,64;UBERON:0007284,7.85e-15,64;UBERON:0003080,2.11e-14,40;UBERON:0000955,2.36e-14,47;UBERON:0006238,2.36e-14,47;UBERON:0010314,2.85e-14,92;UBERON:0002616,1.02e-13,46;UBERON:0002780,1.92e-13,39;UBERON:0001890,1.92e-13,39;UBERON:0006240,1.92e-13,39;UBERON:0000956,3.13e-13,21;UBERON:0001869,3.13e-13,21;UBERON:0000203,3.13e-13,21;UBERON:0010371,1.30e-12,73;UBERON:0004121,4.21e-12,95;UBERON:0000924,4.21e-12,95;UBERON:0006601,4.21e-12,95;UBERON:0003056,2.75e-11,49;UBERON:0000025,8.88e-10,114;UBERON:0002619,8.87e-09,17;UBERON:0004111,2.35e-08,122;UBERON:0002240,2.62e-08,6;UBERON:0005174,2.62e-08,6;UBERON:0001137,2.62e-08,6;UBERON:0001948,7.54e-08,5;UBERON:0002315,7.54e-08,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,1.48936426801328,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872100625521786,0.878744730937887,2.13872888981712,0.419959264876088,0,0,0,0,0,0,0,2.02316460859598,1.5869729378161,2.53532561402472,0,0,0,0,0,0.898800331555214,0,4.56234294157302,3.37514845829227,4.20649922702764,3.42781181284564,3.75476519617743,3.06226998037385,3.45043695665651,8.27296907949019,3.30347642998166,0.893811366596314,1.38245879930619,1.58263545276233,1.18933936683133,1.56274011167028,0,0.56276261003168,1.06958773443767,4.12480019663135,5.26775218956681,2.42319279572891,0.075726193333184,0.226714680320357,1.15945795480671,0,0,0,0,0,0.280888840263504,0.852151612890289,0.519572009205738,0.70667914902068,0,0,0,0,0.216491041011214,0,0,0.11418387971906,0,0.148442139064825,0,0,0,0.150722640552623,0,0.125666591329675,0,1.3013942122792,0,0.970601099684455,0.883366073841574,0,0,0,0,0,0,0,0,2.54644086988199,3.66000482254901,14.827213549318,2.78118912307642,2.04572365864264,1.45451631191692,3.73154905055843,0.101839363850316,0.124406970610093,0,0,0.260240885925407,0,0,0.60281927134286,0.340182495756639,0.12811372028485,0.468508622798644,1.29351685369508,0,0.567318240503458,0.175951124163949,0.219195732427575,0.278047249225598,0.348252166522167,1.23469281844766,0,0,0,0,0.828503090142008,0.703578179943289,1.08037236876609,0.710234206755631,1.18058539048442,1.85120535464854,1.86027155800326,1.3413670069981,1.86824547787471,1.15191894939436,1.97000956894914,0.972825714550269,0.877199924551994,1.3173006917463,0.939444931322602,1.05144974282064,2.46971069710283,0,0,0,0.232236671860439,0,0.201683524623343,0,0.190225626112559,0,0,0,0.198956472041151,0.19496408711912,0,0,0,0,0.456994050438915,0,0,0.193952487167626,0,0,0,0.31399745568275,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0.372140947668503,0,0,0,0.482443521363367,0.184753190166605,0.189491411770485,0.325929952884052,0,0,0,0,0.195133647857799,0.630540576424764,0,0.159454768657487,0,0,0.289298117163023,0,0,0.983528546038072,0.275936746304732,1.9266070798535,1.05490517932983,0,0.757412781613119,0,0.390438744296638,0,0,0,0,0,0,0,1.28528526568723,0,0,0.162886959353576,0.329940245945071,0,0,0,0,0,0.614870295887855,0.258428293168221,0,0.356497378384721,0.316036757935816,0,0,0,0,0.258717367565509,0,0,0.356737635204141,0.658196082408484,0,0,0,0.220528398054962,1.31909002353184,0.645857706783622,0.663442174209714,0.358117032009409,0.164140899745061,0,1.11255181206306,0,0,0,0,0,0,0,0,0,0,0,0.406638934253697,0.432021363287205,0.209088296014469,0.218362563746178,0.404593039154462,0.826534557253359,0.26175594198403,0.259229946583586,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0.102710957164827,0,0.179026695667481,0,0.120195449519969,0,0.100966449948148,0.0762068066549998,0,0,0,0,0.906921534460845,0,0,0,0.19318959403219,0.187682475451182,0.36630324853453,0.428736758158132,0,1.6942555278512,1.38097570952153,2.29158205375759,2.23409137046794,2.05524755931193,2.2661816921691,0.675022500231806,0.900642406448441,0.453142408984205,0,0.103787347584177,0,0.170733605754134,1.45864030240976,0,0.183843508450014,1.11123363900808,1.03017528619447,0.64183841918363,3.28506375292937,2.5347929989024,2.26351609663291,1.03005658216871,0.960377286073039,1.26358031702349,0,1.15884325944855,1.54327376370964,1.64834360321323,1.32479028120958,1.02860775715625,0.177475806159338,1.43061713968393,0.872078499793971,1.31753132581463,0.846146078916765,1.82927972872773,1.31534855718921,1.35804113845862,0.561142271657738,1.06771516311757,0.886540341380071,1.22769312950907,0.619747364743864,1.73615949883027,1.99848462350357,1.63752125911786,0.429742108096597,1.53030665655075,1.32354851471709,0.463735671240843 | |||
|short_description=p5@Cdh13 | |||
}} |
Revision as of 00:29, 6 August 2015
Short description: | p5@Cdh13 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Cdh13_5end |
Coexpression cluster: | MCL_coexpression_mm9:3658 |
Association with transcript: | -130bp_to_ENSMUST00000117160_5end |
EntrezGene: | 12554 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.72e-19 | 23 |
neuroblast (sensu Vertebrata) | 1.72e-19 | 23 |
neuron | 1.35e-11 | 33 |
neuronal stem cell | 1.35e-11 | 33 |
neuroblast | 1.35e-11 | 33 |
electrically signaling cell | 1.35e-11 | 33 |
neuron of cerebral cortex | 3.11e-09 | 6 |
electrically responsive cell | 7.11e-09 | 39 |
electrically active cell | 7.11e-09 | 39 |
neural cell | 1.59e-08 | 43 |
ectodermal cell | 3.42e-08 | 44 |
neurectodermal cell | 3.42e-08 | 44 |