FFCP PHASE1:Mm9::chr3:127493021..127493043,+: Difference between revisions
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{{FFCP|EntrezGene=211550|HGNC=|UniProt=|association_with_transcript=187bp_to_ENSMUST00000166778_5end|description=CAGE_peak_8_at_Tifa_5end|id=chr3:127493021..127493043,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002476,4.05e-15,2;CL:0000213,2.98e-08,1;CL:0002078,2.98e-08,1;CL:0000115,2.98e-08,1;CL:0002262,2.98e-08,1;CL:1000398,2.98e-08,1;CL:0002194,5.22e-08,4;CL:0000766,5.22e-08,4;CL:0000234,5.22e-08,4;CL:0000576,5.22e-08,4;CL:0000235,5.22e-08,4;CL:0000864,5.22e-08,4;CL:0002009,5.22e-08,4;CL:0000040,5.22e-08,4;CL:0000559,5.22e-08,4|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0001155,1.68e-14,2;UBERON:0000059,1.68e-14,2;UBERON:0000473,7.06e-12,14;UBERON:0003135,4.36e-11,15;UBERON:0003101,2.15e-10,16;UBERON:0000079,2.15e-10,16;UBERON:0004176,8.82e-10,17;UBERON:0009196,8.82e-10,17;UBERON:0009117,8.82e-10,17;UBERON:0000991,3.09e-09,18;UBERON:0005564,3.09e-09,18;UBERON:0002394,2.98e-08,1;UBERON:0001281,2.98e-08,1;UBERON:0000353,2.98e-08,1;UBERON:0003497,2.98e-08,1;UBERON:0003909,2.98e-08,1;UBERON:0003928,2.98e-08,1;UBERON:0003835,2.98e-08,1;UBERON:0003513,2.98e-08,1;UBERON:0001280,2.98e-08,1;UBERON:0004647,2.98e-08,1;UBERON:0002294,2.98e-08,1;UBERON:0001173,2.98e-08,1;UBERON:0004912,2.98e-08,1;UBERON:0005171,2.98e-08,1;UBERON:0001153,4.10e-08,1;UBERON:0001045,4.10e-08,1;UBERON:0002553,6.89e-08,39;UBERON:0001044,7.68e-08,1;UBERON:0001736,7.68e-08,1;UBERON:0003293,7.68e-08,1;UBERON:0003294,7.68e-08,1;UBERON:0001829,7.68e-08,1;UBERON:0010047,7.68e-08,1;UBERON:0000167,7.68e-08,1;UBERON:0006298,7.68e-08,1;UBERON:0003133,6.51e-07,24|phase1_expression=0,0,0,0.30246421130683,0.500895729946347,0,0,0,0,0,0,0,0,0,0,0.607425802169478,0.699561878128147,0,0,0.42438965179803,0.340173160604279,0.198581902401771,0,0.47997726838022,0,0,0.86152399231815,0.646413698057667,0.760093677825496,0,0,0,0,0,0.288851619751275,0.332469290716985,0,0,0,0,0,0,0,0.755380907853464,0.811015449756117,0.734187008646726,0,0,0,0,0,0,0.335565212115473,0,0,0,0,0.515672092277442,0,0,0,0.338844532069132,0,0,0.988866362566974,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0.153606533256243,0.131886287730194,0,0,0,0,0.15279824777681,0,0,0.372798891650601,0.075726193333184,0,2.6087803983151,0,0,0,0,0,0.280888840263504,0.170430322578058,0.779358013808606,0,0.281686839553361,0,0,0,0,0,0,0.34255163915718,0.517875767294343,0.148442139064825,0,0.304465478312141,0,0,0,0,0,0.144599356919912,0,0,0,0.969750506270444,1.86391761218122,0.292780797011547,0,1.78819938646014,0,0.599902730993408,0.127070227073065,0,0.457500602818626,0,0,0.255715457330331,0,0,0,0.124406970610093,0.252722758433675,0.210441855886474,0.130120442962704,0,0,0,0.0680364991513279,0,0,0.258703370739016,0,0,0,0,0,0.348252166522167,0,0,0,0.257347907114715,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0.660837565967596,0.264450566663544,0,0,0.128867461322093,0.403367049246685,0,0,0,0,0.502670417600539,3.97912944082302,0.38992817423824,0.898819408654221,0,0,0.189667900953082,0,0,0.203651327845314,0,0.210407459670956,0.252946148497029,0.442830443938806,0.156998727841375,0.123397163921801,0,0.166845105716094,0,0.674586337154561,0.202860121388503,0,0.50925170356284,0,0.486405680325106,0.274561413188081,0,0.744281895337007,0,0,0,0,0.369506380333209,0.37898282354097,0,0,0,0,0,0,0.157635144106191,0.221464689648775,0.159454768657487,0.163863314715738,0.172684981865896,0,3.01582567878545,3.26343410291226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0.425820255624806,0,0.162886959353576,0.164970122972535,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0.680879211507576,0.18006109403131,0,0,0.532020700926821,0.178368817602071,0,0.608929898229199,0,0,0,0.49465875882444,0.161464426695906,0,0,0.328281799490123,0.291480836629851,0,0.683483523191411,0.412773735926445,0,0.188368457004691,2.59719032669948,0.228778173206523,0,0.279902904647316,0.138199973804424,0,0,0,0,0,0,0.539457385539283,0.0826534557253359,0.26175594198403,0,1.24267862617385,1.12738587736838,0,0.165458490457098,0,0,0.168956125490778,1.05621514781179,1.3020438484395,3.14578033277133,1.44950472495604,0.864090018773596,0,0.202725215290164,0,0,0,0,0,0.443068581523732,0.100966449948148,0,0,0.194915761479505,0,0.350630706544707,0,0,0,0,0.386379188064381,0,0.183151624267265,0.214368379079066,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0.38581844092741,0,0,0,0,0,0.145346416632329,0.0941093804153306,0,0,0,0,0,0,0.197008964751127,0,0,0,0.249810577937946,0,0,0,0,0|short_description=p8@Tifa}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:211550 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=187bp_to_ENSMUST00000166778_5end | |||
|cluster_id=chr3:127493021..127493043,+ | |||
|description=CAGE_peak_8_at_Tifa_5end | |||
|id=chr3:127493021..127493043,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002476,4.05e-15,2;CL:0000213,2.98e-08,1;CL:0002078,2.98e-08,1;CL:0000115,2.98e-08,1;CL:0002262,2.98e-08,1;CL:1000398,2.98e-08,1;CL:0002194,5.22e-08,4;CL:0000766,5.22e-08,4;CL:0000234,5.22e-08,4;CL:0000576,5.22e-08,4;CL:0000235,5.22e-08,4;CL:0000864,5.22e-08,4;CL:0002009,5.22e-08,4;CL:0000040,5.22e-08,4;CL:0000559,5.22e-08,4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001155,1.68e-14,2;UBERON:0000059,1.68e-14,2;UBERON:0000473,7.06e-12,14;UBERON:0003135,4.36e-11,15;UBERON:0003101,2.15e-10,16;UBERON:0000079,2.15e-10,16;UBERON:0004176,8.82e-10,17;UBERON:0009196,8.82e-10,17;UBERON:0009117,8.82e-10,17;UBERON:0000991,3.09e-09,18;UBERON:0005564,3.09e-09,18;UBERON:0002394,2.98e-08,1;UBERON:0001281,2.98e-08,1;UBERON:0000353,2.98e-08,1;UBERON:0003497,2.98e-08,1;UBERON:0003909,2.98e-08,1;UBERON:0003928,2.98e-08,1;UBERON:0003835,2.98e-08,1;UBERON:0003513,2.98e-08,1;UBERON:0001280,2.98e-08,1;UBERON:0004647,2.98e-08,1;UBERON:0002294,2.98e-08,1;UBERON:0001173,2.98e-08,1;UBERON:0004912,2.98e-08,1;UBERON:0005171,2.98e-08,1;UBERON:0001153,4.10e-08,1;UBERON:0001045,4.10e-08,1;UBERON:0002553,6.89e-08,39;UBERON:0001044,7.68e-08,1;UBERON:0001736,7.68e-08,1;UBERON:0003293,7.68e-08,1;UBERON:0003294,7.68e-08,1;UBERON:0001829,7.68e-08,1;UBERON:0010047,7.68e-08,1;UBERON:0000167,7.68e-08,1;UBERON:0006298,7.68e-08,1;UBERON:0003133,6.51e-07,24 | |||
|phase1_expression=0,0,0,0.30246421130683,0.500895729946347,0,0,0,0,0,0,0,0,0,0,0.607425802169478,0.699561878128147,0,0,0.42438965179803,0.340173160604279,0.198581902401771,0,0.47997726838022,0,0,0.86152399231815,0.646413698057667,0.760093677825496,0,0,0,0,0,0.288851619751275,0.332469290716985,0,0,0,0,0,0,0,0.755380907853464,0.811015449756117,0.734187008646726,0,0,0,0,0,0,0.335565212115473,0,0,0,0,0.515672092277442,0,0,0,0.338844532069132,0,0,0.988866362566974,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0.153606533256243,0.131886287730194,0,0,0,0,0.15279824777681,0,0,0.372798891650601,0.075726193333184,0,2.6087803983151,0,0,0,0,0,0.280888840263504,0.170430322578058,0.779358013808606,0,0.281686839553361,0,0,0,0,0,0,0.34255163915718,0.517875767294343,0.148442139064825,0,0.304465478312141,0,0,0,0,0,0.144599356919912,0,0,0,0.969750506270444,1.86391761218122,0.292780797011547,0,1.78819938646014,0,0.599902730993408,0.127070227073065,0,0.457500602818626,0,0,0.255715457330331,0,0,0,0.124406970610093,0.252722758433675,0.210441855886474,0.130120442962704,0,0,0,0.0680364991513279,0,0,0.258703370739016,0,0,0,0,0,0.348252166522167,0,0,0,0.257347907114715,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0.660837565967596,0.264450566663544,0,0,0.128867461322093,0.403367049246685,0,0,0,0,0.502670417600539,3.97912944082302,0.38992817423824,0.898819408654221,0,0,0.189667900953082,0,0,0.203651327845314,0,0.210407459670956,0.252946148497029,0.442830443938806,0.156998727841375,0.123397163921801,0,0.166845105716094,0,0.674586337154561,0.202860121388503,0,0.50925170356284,0,0.486405680325106,0.274561413188081,0,0.744281895337007,0,0,0,0,0.369506380333209,0.37898282354097,0,0,0,0,0,0,0.157635144106191,0.221464689648775,0.159454768657487,0.163863314715738,0.172684981865896,0,3.01582567878545,3.26343410291226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0.425820255624806,0,0.162886959353576,0.164970122972535,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0.680879211507576,0.18006109403131,0,0,0.532020700926821,0.178368817602071,0,0.608929898229199,0,0,0,0.49465875882444,0.161464426695906,0,0,0.328281799490123,0.291480836629851,0,0.683483523191411,0.412773735926445,0,0.188368457004691,2.59719032669948,0.228778173206523,0,0.279902904647316,0.138199973804424,0,0,0,0,0,0,0.539457385539283,0.0826534557253359,0.26175594198403,0,1.24267862617385,1.12738587736838,0,0.165458490457098,0,0,0.168956125490778,1.05621514781179,1.3020438484395,3.14578033277133,1.44950472495604,0.864090018773596,0,0.202725215290164,0,0,0,0,0,0.443068581523732,0.100966449948148,0,0,0.194915761479505,0,0.350630706544707,0,0,0,0,0.386379188064381,0,0.183151624267265,0.214368379079066,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0.38581844092741,0,0,0,0,0,0.145346416632329,0.0941093804153306,0,0,0,0,0,0,0.197008964751127,0,0,0,0.249810577937946,0,0,0,0,0 | |||
|short_description=p8@Tifa | |||
}} |
Revision as of 00:22, 6 August 2015
Short description: | p8@Tifa |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Tifa_5end |
Coexpression cluster: | NA |
Association with transcript: | 187bp_to_ENSMUST00000166778_5end |
EntrezGene: | 211550 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow macrophage | 4.05e-15 | 2 |
lining cell | 2.98e-08 | 1 |
meso-epithelial cell | 2.98e-08 | 1 |
endothelial cell | 2.98e-08 | 1 |
endothelial cell of sinusoid | 2.98e-08 | 1 |
endothelial cell of hepatic sinusoid | 2.98e-08 | 1 |
monopoietic cell | 5.22e-08 | 4 |
myeloid leukocyte | 5.22e-08 | 4 |
phagocyte | 5.22e-08 | 4 |
monocyte | 5.22e-08 | 4 |
macrophage | 5.22e-08 | 4 |
tissue-resident macrophage | 5.22e-08 | 4 |
macrophage dendritic cell progenitor | 5.22e-08 | 4 |
monoblast | 5.22e-08 | 4 |
promonocyte | 5.22e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
colon | 1.68e-14 | 2 |
large intestine | 1.68e-14 | 2 |
testis | 7.06e-12 | 14 |
male reproductive organ | 4.36e-11 | 15 |
male organism | 2.15e-10 | 16 |
male reproductive system | 2.15e-10 | 16 |
external genitalia | 8.82e-10 | 17 |
indifferent external genitalia | 8.82e-10 | 17 |
indifferent gonad | 8.82e-10 | 17 |
gonad | 3.09e-09 | 18 |
gonad primordium | 3.09e-09 | 18 |
bile duct | 2.98e-08 | 1 |
hepatic sinusoid | 2.98e-08 | 1 |
parenchyma | 2.98e-08 | 1 |
abdomen blood vessel | 2.98e-08 | 1 |
sinusoid | 2.98e-08 | 1 |
digestive system duct | 2.98e-08 | 1 |
abdominal segment blood vessel | 2.98e-08 | 1 |
trunk blood vessel | 2.98e-08 | 1 |
liver parenchyma | 2.98e-08 | 1 |
liver lobule | 2.98e-08 | 1 |
biliary system | 2.98e-08 | 1 |
biliary tree | 2.98e-08 | 1 |
biliary bud | 2.98e-08 | 1 |
hepatic duct | 2.98e-08 | 1 |
caecum | 4.10e-08 | 1 |
midgut | 4.10e-08 | 1 |
anatomical cavity | 6.89e-08 | 39 |
saliva-secreting gland | 7.68e-08 | 1 |
submandibular gland | 7.68e-08 | 1 |
gland of oral region | 7.68e-08 | 1 |
gland of foregut | 7.68e-08 | 1 |
major salivary gland | 7.68e-08 | 1 |
oral gland | 7.68e-08 | 1 |
oral cavity | 7.68e-08 | 1 |
submandibular gland primordium | 7.68e-08 | 1 |
reproductive organ | 6.51e-07 | 24 |