FFCP PHASE1:Mm9::chr5:108863392..108863428,-: Difference between revisions
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{{FFCP|EntrezGene=11958|HGNC=|MCL_coexpression_id=282|UniProt=Q06185|association_with_transcript=0bp_to_ENSMUST00000123184,NM_007507,uc008yoa.1,uc008yob.1_5end|description=CAGE_peak_1_at_Atp5k_5end|id=chr5:108863392..108863428,-|ontology_enrichment_celltype=CL:0000117!2.36e-09!23;CL:0000337!2.36e-09!23;CL:0002321!5.22e-08!70;CL:0000220!5.22e-08!70;CL:0002319!7.15e-08!43;CL:0000221!1.03e-07!44;CL:0000133!1.03e-07!44;CL:0000055!2.84e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,2.36e-09,23;CL:0000337,2.36e-09,23;CL:0002321,5.22e-08,70;CL:0002319,7.15e-08,43;CL:0000221,1.03e-07,44;CL:0000133,1.03e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!3.51e-09!18;UBERON:0000948!3.51e-09!18;UBERON:0005498!3.51e-09!18;UBERON:0004140!3.51e-09!18;UBERON:0009881!3.51e-09!18;UBERON:0004141!3.51e-09!18;UBERON:0003084!3.51e-09!18;UBERON:0007005!3.51e-09!18;UBERON:0004139!3.51e-09!18;UBERON:0004291!3.51e-09!18;UBERON:0003103!4.49e-09!43;UBERON:0002020!5.69e-09!34;UBERON:0001017!4.37e-07!73;UBERON:0005743!4.37e-07!73;UBERON:0002791!5.84e-07!29;UBERON:0003528!5.84e-07!29;UBERON:0001893!5.84e-07!29|ontology_enrichment_uberon_v019_2=UBERON:0007100,3.51e-09,18;UBERON:0000948,3.51e-09,18;UBERON:0005498,3.51e-09,18;UBERON:0004140,3.51e-09,18;UBERON:0009881,3.51e-09,18;UBERON:0004141,3.51e-09,18;UBERON:0003084,3.51e-09,18;UBERON:0007005,3.51e-09,18;UBERON:0004139,3.51e-09,18;UBERON:0004291,3.51e-09,18;UBERON:0003103,4.49e-09,43;UBERON:0002020,5.69e-09,34;UBERON:0001017,4.37e-07,73;UBERON:0000073,4.88e-07,54;UBERON:0003528,5.84e-07,29;UBERON:0002791,5.84e-07,29;UBERON:0001893,5.84e-07,29;UBERON:0010314,7.52e-07,92|phase1_expression=21.1396478178328,39.0852456556084,64.6098919933141,28.7341000741489,59.6065918636153,34.4152507419374,40.4149868230259,17.3025253411712,8.869689495555,7.0219357896598,22.6007718057667,20.1823562258201,15.9216678836021,14.8614684112296,44.6367080832988,31.9910922475925,46.1710839564577,23.1864691538305,15.4939309974485,25.4633791078818,42.0113853346285,24.0284101906142,33.4335730097837,65.7568857680901,73.6403792225616,117.143320679464,81.4140172740651,41.8014191410625,91.5912881779722,72.58467737086,73.3927990269059,36.8317790606586,43.6695999185045,0,49.6824785972192,67.8237353062649,52.2673552031665,15.9042019680025,40.6294379152376,23.0350447348471,22.3527965451785,21.1744100337118,17.4783727091215,19.7658004221656,19.7685015878053,25.3294517983121,114.229136274814,158.722313844965,97.1012927686366,91.7709123630618,99.6703321972581,113.564525848328,18.2883040602933,15.9579671242496,15.7964085596958,47.5929956666502,48.1376179097111,72.1940929188419,92.2563061519766,43.9062512795787,73.5244428067168,116.223674499712,77.3686472616691,114.737213953378,75.1538435550901,115.808258736214,111.750841223365,155.992631960551,55.6813218096525,68.7180226108305,82.026734927039,112.260836870695,138.484575176662,68.9623199580191,69.0087391331302,62.5068774894814,35.2370819198044,80.5707103317534,85.4052324904714,72.5374582516066,73.3730901691325,92.7225799591033,145.454342479719,127.747112477191,85.1086240116832,58.9257170947335,91.8297341154214,70.6453899677889,23.9294770932862,22.898182712356,11.3047150593654,93.7862025909711,55.7576493640355,162.990363874621,142.950811838487,122.311340177573,63.9022111599471,14.1457167739788,67.5443611967459,42.0474093667305,33.52073390685,28.2318250311499,17.8363667794652,0,76.4213374769586,78.5415582972806,93.0164978827201,67.5968567936835,10.8753911131812,12.3206975423805,25.1553723810897,18.8768596553528,24.9064737036543,30.2952507510771,16.344830291863,41.9726415041116,15.0788930317968,63.4791176878412,30.9613693182456,49.6624229338546,55.4312211335588,52.366527338604,33.550517019262,42.1604347696628,33.5114730901528,69.2288619615283,30.5528567490097,36.5940665905979,34.0548208555813,36.2493347359671,41.1750542536764,32.1675141408933,34.4172153980707,26.8501230196847,56.1027720310812,39.4246269254651,20.6733908616142,31.1017426525233,32.0957903210767,29.8827435358793,24.0722819481002,22.0706020256134,21.7875177064473,26.6747527569216,16.805015290378,26.7757675395336,21.7388000978571,26.6464471861186,23.7124792226126,17.9650776159428,26.5686197487563,38.140057442398,20.8535436919198,19.5021213252413,17.9030458674911,29.0590029555,14.0442637462647,28.050921875504,41.7720344111521,53.4384493141595,64.2601404348204,106.236616261999,49.0061602661385,95.037123933996,105.210170989192,111.151225590695,182.425912951741,127.157457837848,121.116049536322,143.646531069208,143.167517657981,234.797179805084,143.146675169765,173.663105875921,32.8052319760039,20.272208638719,53.1974240603915,51.3034099327276,30.7135080770737,26.7072172639504,17.7837096624489,36.9080850060717,47.8112794266471,32.3383564391351,91.5841088780907,52.3742676022355,48.2563600896517,40.7860767684359,44.2568477760403,42.2445122067484,76.0805935558924,64.521772534415,31.1055357563054,45.3566595060623,24.7957018480777,24.641810669283,35.687257638843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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:11958 | |||
|HGNC= | |||
|MCL_coexpression_id=282 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q06185 | |||
|association_with_transcript=0bp_to_ENSMUST00000123184,NM_007507,uc008yoa.1,uc008yob.1_5end | |||
|cluster_id=chr5:108863392..108863428,- | |||
|description=CAGE_peak_1_at_Atp5k_5end | |||
|id=chr5:108863392..108863428,- | |||
|ontology_enrichment_celltype=CL:0000117!2.36e-09!23;CL:0000337!2.36e-09!23;CL:0002321!5.22e-08!70;CL:0000220!5.22e-08!70;CL:0002319!7.15e-08!43;CL:0000221!1.03e-07!44;CL:0000133!1.03e-07!44;CL:0000055!2.84e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.36e-09,23;CL:0000337,2.36e-09,23;CL:0002321,5.22e-08,70;CL:0002319,7.15e-08,43;CL:0000221,1.03e-07,44;CL:0000133,1.03e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!3.51e-09!18;UBERON:0000948!3.51e-09!18;UBERON:0005498!3.51e-09!18;UBERON:0004140!3.51e-09!18;UBERON:0009881!3.51e-09!18;UBERON:0004141!3.51e-09!18;UBERON:0003084!3.51e-09!18;UBERON:0007005!3.51e-09!18;UBERON:0004139!3.51e-09!18;UBERON:0004291!3.51e-09!18;UBERON:0003103!4.49e-09!43;UBERON:0002020!5.69e-09!34;UBERON:0001017!4.37e-07!73;UBERON:0005743!4.37e-07!73;UBERON:0002791!5.84e-07!29;UBERON:0003528!5.84e-07!29;UBERON:0001893!5.84e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,3.51e-09,18;UBERON:0000948,3.51e-09,18;UBERON:0005498,3.51e-09,18;UBERON:0004140,3.51e-09,18;UBERON:0009881,3.51e-09,18;UBERON:0004141,3.51e-09,18;UBERON:0003084,3.51e-09,18;UBERON:0007005,3.51e-09,18;UBERON:0004139,3.51e-09,18;UBERON:0004291,3.51e-09,18;UBERON:0003103,4.49e-09,43;UBERON:0002020,5.69e-09,34;UBERON:0001017,4.37e-07,73;UBERON:0000073,4.88e-07,54;UBERON:0003528,5.84e-07,29;UBERON:0002791,5.84e-07,29;UBERON:0001893,5.84e-07,29;UBERON:0010314,7.52e-07,92 | |||
|phase1_expression=21.1396478178328,39.0852456556084,64.6098919933141,28.7341000741489,59.6065918636153,34.4152507419374,40.4149868230259,17.3025253411712,8.869689495555,7.0219357896598,22.6007718057667,20.1823562258201,15.9216678836021,14.8614684112296,44.6367080832988,31.9910922475925,46.1710839564577,23.1864691538305,15.4939309974485,25.4633791078818,42.0113853346285,24.0284101906142,33.4335730097837,65.7568857680901,73.6403792225616,117.143320679464,81.4140172740651,41.8014191410625,91.5912881779722,72.58467737086,73.3927990269059,36.8317790606586,43.6695999185045,0,49.6824785972192,67.8237353062649,52.2673552031665,15.9042019680025,40.6294379152376,23.0350447348471,22.3527965451785,21.1744100337118,17.4783727091215,19.7658004221656,19.7685015878053,25.3294517983121,114.229136274814,158.722313844965,97.1012927686366,91.7709123630618,99.6703321972581,113.564525848328,18.2883040602933,15.9579671242496,15.7964085596958,47.5929956666502,48.1376179097111,72.1940929188419,92.2563061519766,43.9062512795787,73.5244428067168,116.223674499712,77.3686472616691,114.737213953378,75.1538435550901,115.808258736214,111.750841223365,155.992631960551,55.6813218096525,68.7180226108305,82.026734927039,112.260836870695,138.484575176662,68.9623199580191,69.0087391331302,62.5068774894814,35.2370819198044,80.5707103317534,85.4052324904714,72.5374582516066,73.3730901691325,92.7225799591033,145.454342479719,127.747112477191,85.1086240116832,58.9257170947335,91.8297341154214,70.6453899677889,23.9294770932862,22.898182712356,11.3047150593654,93.7862025909711,55.7576493640355,162.990363874621,142.950811838487,122.311340177573,63.9022111599471,14.1457167739788,67.5443611967459,42.0474093667305,33.52073390685,28.2318250311499,17.8363667794652,0,76.4213374769586,78.5415582972806,93.0164978827201,67.5968567936835,10.8753911131812,12.3206975423805,25.1553723810897,18.8768596553528,24.9064737036543,30.2952507510771,16.344830291863,41.9726415041116,15.0788930317968,63.4791176878412,30.9613693182456,49.6624229338546,55.4312211335588,52.366527338604,33.550517019262,42.1604347696628,33.5114730901528,69.2288619615283,30.5528567490097,36.5940665905979,34.0548208555813,36.2493347359671,41.1750542536764,32.1675141408933,34.4172153980707,26.8501230196847,56.1027720310812,39.4246269254651,20.6733908616142,31.1017426525233,32.0957903210767,29.8827435358793,24.0722819481002,22.0706020256134,21.7875177064473,26.6747527569216,16.805015290378,26.7757675395336,21.7388000978571,26.6464471861186,23.7124792226126,17.9650776159428,26.5686197487563,38.140057442398,20.8535436919198,19.5021213252413,17.9030458674911,29.0590029555,14.0442637462647,28.050921875504,41.7720344111521,53.4384493141595,64.2601404348204,106.236616261999,49.0061602661385,95.037123933996,105.210170989192,111.151225590695,182.425912951741,127.157457837848,121.116049536322,143.646531069208,143.167517657981,234.797179805084,143.146675169765,173.663105875921,32.8052319760039,20.272208638719,53.1974240603915,51.3034099327276,30.7135080770737,26.7072172639504,17.7837096624489,36.9080850060717,47.8112794266471,32.3383564391351,91.5841088780907,52.3742676022355,48.2563600896517,40.7860767684359,44.2568477760403,42.2445122067484,76.0805935558924,64.521772534415,31.1055357563054,45.3566595060623,24.7957018480777,24.641810669283,35.6872576388431,34.997774125269,39.2066530170395,86.4995467160469,83.2093257559286,82.305908335841,67.5911989758699,17.5187361001899,29.2872902718672,34.4039031948826,19.8802918960733,28.7000820105376,32.3374831762403,41.4282437929167,34.2105328495325,55.1868440508044,18.6898668485561,29.7712758134803,63.6556853153704,61.3766673411482,73.7323369575059,52.1039003072437,14.7802552133284,27.8552375302613,21.1854469374634,31.4028408684098,38.2545104710258,14.7405506548798,20.4717531161972,17.3668946593441,16.8669604193624,24.3611158613652,19.1345722388985,24.9072238367922,30.3925568083976,18.8043776155965,67.8560777726725,62.5491536391516,77.2069908639887,27.869611376778,37.8899392371189,45.9469811441436,26.5574611510214,107.047673134654,32.4973465998744,45.2908943384101,26.9279247165999,23.1799734013975,30.523418349288,22.6461224631066,33.5992882390162,37.1164939547366,17.392662229647,41.4504498184131,15.1875891172847,27.2440373610901,24.1072699843293,18.6416238958965,27.8764790513922,23.5497217070332,40.8136801902414,48.2829004175099,23.0335476447003,22.1353306519628,13.4382712447475,18.1766864738753,29.2327850275471,35.7121536467472,27.4088382294997,48.4737053266478,22.46901397975,28.0895306688844,32.5983883132541,25.0774330986963,20.9261475697883,29.4308549043416,20.8977256164694,20.7036165397928,21.5897971418614,22.8778636532926,20.2886126210565,35.1207718765353,14.0474051225438,30.8802175632158,27.9331284967339,15.4292445760358,58.0046864893403,34.3036808719443,28.5354370932414,38.3879574411594,22.9641213938442,28.632005464713,26.7920686333209,28.1397153044023,12.4084253895514,12.7355821614529,10.7795979567451,84.9656850033451,20.4036715859832,14.6390016331331,33.049634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| |||
|short_description=p1@Atp5k | |||
}} |
Revision as of 23:56, 5 August 2015
Short description: | p1@Atp5k |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Atp5k_5end |
Coexpression cluster: | MCL_coexpression_mm9:282 |
Association with transcript: | 0bp_to_ENSMUST00000123184, NM_007507, uc008yoa.1, uc008yob.1_5end |
EntrezGene: | 11958 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.36e-09 | 23 |
neuroblast (sensu Vertebrata) | 2.36e-09 | 23 |
embryonic cell | 5.22e-08 | 70 |
neural cell | 7.15e-08 | 43 |
ectodermal cell | 1.03e-07 | 44 |
neurectodermal cell | 1.03e-07 | 44 |
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 3.51e-09 | 18 |
heart | 3.51e-09 | 18 |
primitive heart tube | 3.51e-09 | 18 |
primary heart field | 3.51e-09 | 18 |
anterior lateral plate mesoderm | 3.51e-09 | 18 |
heart tube | 3.51e-09 | 18 |
heart primordium | 3.51e-09 | 18 |
cardiac mesoderm | 3.51e-09 | 18 |
cardiogenic plate | 3.51e-09 | 18 |
heart rudiment | 3.51e-09 | 18 |
compound organ | 4.49e-09 | 43 |
gray matter | 5.69e-09 | 34 |
central nervous system | 4.37e-07 | 73 |
regional part of nervous system | 4.88e-07 | 54 |
brain grey matter | 5.84e-07 | 29 |
regional part of telencephalon | 5.84e-07 | 29 |
telencephalon | 5.84e-07 | 29 |
structure with developmental contribution from neural crest | 7.52e-07 | 92 |