FFCP PHASE1:Mm9::chr1:74342359..74342368,-: Difference between revisions
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{{FFCP|EntrezGene=69660|HGNC=|MCL_coexpression_id=20|UniProt=|association_with_transcript=-90bp_to_ENSMUST00000152603_5end|description=CAGE_peak_9_at_Tmbim1_5end|id=chr1:74342359..74342368,-|ontology_enrichment_celltype=CL:0000221!4.26e-08!44;CL:0000133!4.26e-08!44;CL:0000540!1.18e-07!33;CL:0000047!1.18e-07!33;CL:0000031!1.18e-07!33;CL:0000404!1.18e-07!33;CL:0002319!1.26e-07!43|ontology_enrichment_celltype_v019_2=CL:0002610,4.23e-22,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!5.42e-13!75;UBERON:0001016!5.42e-13!75;UBERON:0001017!1.09e-12!73;UBERON:0005743!1.09e-12!73;UBERON:0004121!5.59e-11!102;UBERON:0000924!5.59e-11!102;UBERON:0006601!5.59e-11!102|ontology_enrichment_uberon_v019_2=UBERON:0004684,4.23e-22,3;UBERON:0002275,4.23e-22,3;UBERON:0001017,2.62e-09,73;UBERON:0001016,4.91e-09,75;UBERON:0002259,8.81e-09,1;UBERON:0002314,8.81e-09,1;UBERON:0004061,8.81e-09,1;UBERON:0006777,8.81e-09,1;UBERON:0005882,8.81e-09,1;UBERON:0002950,2.91e-08,4;UBERON:0001891,2.91e-08,4;UBERON:0009616,2.91e-08,4;UBERON:0010286,2.91e-08,4;UBERON:0000073,4.11e-08,54;UBERON:0004121,6.35e-07,95;UBERON:0000924,6.35e-07,95;UBERON:0006601,6.35e-07,95|phase1_expression=0.160148847104794,0,0,0,0,0.33575854382378,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0,0.101376931219515,0,0,0.218025156380447,0.219686182734472,0,0.419959264876088,0,0,0,0,0,0.286533439938757,0,0.202316460859598,0,0.633831403506179,0,0,0,0,0,0.299600110518405,0,0,0,0,0.285650984403804,0.441737081903227,0,0,0,1.10115880999389,1.27687338085188,1.38245879930619,0.131886287730194,0,0,0.837548997004143,0.56276261003168,1.22238598221448,0.294628585473668,0.569486723196412,0.186399445825301,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0,0.170430322578058,0,0,0.422530259330042,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0.173485326766136,0,0.230615497256059,0,0.117588707135705,0,0,0,0,1.13236794963186,0.220841518460394,0.484875253135222,0,0.585561594023094,0,0,0,0,0,1.9472783122627,1.83000241127451,0.251308704225729,0.695297280769106,0.255715457330331,2.0778804455956,0.486723789203273,0.101839363850316,0,0,0,0.130120442962704,0,0,0.30140963567143,0,0.2562274405697,0.0937017245597288,0,0.215567992932842,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0.232533944750408,0,0,0.16455984991348,0,0.0810688095458557,0.292399974850665,0.219550115291051,0.268412837520744,0.841159794256509,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0.140271639780637,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0.189491411770485,0,0,0,0.335012514883631,0,0.195133647857799,0.157635144106191,0,0.318909537314974,0.327726629431476,0.172684981865896,0,0,0,0,0,3.69266356971921,0.937693492737625,0,0,0.315508219416257,0.780877488593277,0.215423397732799,0.716906393857656,2.45078541490634,0.566153061577665,0.809621403349789,0,0.790575555893047,0.321321316421807,0.283880170416537,0.178065603667255,0,0.164970122972535,0,0.242780636154981,0.302323556964751,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0.164549020602121,0,0.23467170806371,0,0.220528398054962,0,0.161464426695906,0.120625849856312,0,0,0,3.15223013417866,0,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0.218362563746178,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0.194451188344048,0.129159823477731,0,0.234714477291508,0,0,0,0,0,0,0.102710957164827,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0.335769232728157,0,0.375364950902364,0.183151624267265,0.214368379079066,0,0,0.460325236507177,0.572895513439397,0.515559547031063,0,0.755393897389701,0,0,0.453142408984205,0,0,0,0,0.243106717068294,0,0,1.11123363900808,0,0,0.505394423527595,0.25347929989024,0,0,0.192075457214608,0.402048282689293,0.952587382566147,0.463537303779422,0.192909220463705,0.824171801606613,0.147198920134397,0.342869252385415,0.177475806159338,0.238436189947321,0.436039249896986,0.564656282491984,0.338458431566706,0,0.263069711437843,0.135804113845862,0,0.474540072496697,0.0985044823755635,0,0.154936841185966,0.192906610981141,0.249810577937946,0.233931608445408,0.429742108096597,0.382576664137687,0.661774257358546,0|short_description=p9@Tmbim1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:69660 | |||
|HGNC= | |||
|MCL_coexpression_id=20 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-90bp_to_ENSMUST00000152603_5end | |||
|cluster_id=chr1:74342359..74342368,- | |||
|description=CAGE_peak_9_at_Tmbim1_5end | |||
|id=chr1:74342359..74342368,- | |||
|ontology_enrichment_celltype=CL:0000221!4.26e-08!44;CL:0000133!4.26e-08!44;CL:0000540!1.18e-07!33;CL:0000047!1.18e-07!33;CL:0000031!1.18e-07!33;CL:0000404!1.18e-07!33;CL:0002319!1.26e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,4.23e-22,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!5.42e-13!75;UBERON:0001016!5.42e-13!75;UBERON:0001017!1.09e-12!73;UBERON:0005743!1.09e-12!73;UBERON:0004121!5.59e-11!102;UBERON:0000924!5.59e-11!102;UBERON:0006601!5.59e-11!102 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004684,4.23e-22,3;UBERON:0002275,4.23e-22,3;UBERON:0001017,2.62e-09,73;UBERON:0001016,4.91e-09,75;UBERON:0002259,8.81e-09,1;UBERON:0002314,8.81e-09,1;UBERON:0004061,8.81e-09,1;UBERON:0006777,8.81e-09,1;UBERON:0005882,8.81e-09,1;UBERON:0002950,2.91e-08,4;UBERON:0001891,2.91e-08,4;UBERON:0009616,2.91e-08,4;UBERON:0010286,2.91e-08,4;UBERON:0000073,4.11e-08,54;UBERON:0004121,6.35e-07,95;UBERON:0000924,6.35e-07,95;UBERON:0006601,6.35e-07,95 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0.33575854382378,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0,0.101376931219515,0,0,0.218025156380447,0.219686182734472,0,0.419959264876088,0,0,0,0,0,0.286533439938757,0,0.202316460859598,0,0.633831403506179,0,0,0,0,0,0.299600110518405,0,0,0,0,0.285650984403804,0.441737081903227,0,0,0,1.10115880999389,1.27687338085188,1.38245879930619,0.131886287730194,0,0,0.837548997004143,0.56276261003168,1.22238598221448,0.294628585473668,0.569486723196412,0.186399445825301,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0,0.170430322578058,0,0,0.422530259330042,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0.173485326766136,0,0.230615497256059,0,0.117588707135705,0,0,0,0,1.13236794963186,0.220841518460394,0.484875253135222,0,0.585561594023094,0,0,0,0,0,1.9472783122627,1.83000241127451,0.251308704225729,0.695297280769106,0.255715457330331,2.0778804455956,0.486723789203273,0.101839363850316,0,0,0,0.130120442962704,0,0,0.30140963567143,0,0.2562274405697,0.0937017245597288,0,0.215567992932842,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0.232533944750408,0,0,0.16455984991348,0,0.0810688095458557,0.292399974850665,0.219550115291051,0.268412837520744,0.841159794256509,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0.140271639780637,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0.189491411770485,0,0,0,0.335012514883631,0,0.195133647857799,0.157635144106191,0,0.318909537314974,0.327726629431476,0.172684981865896,0,0,0,0,0,3.69266356971921,0.937693492737625,0,0,0.315508219416257,0.780877488593277,0.215423397732799,0.716906393857656,2.45078541490634,0.566153061577665,0.809621403349789,0,0.790575555893047,0.321321316421807,0.283880170416537,0.178065603667255,0,0.164970122972535,0,0.242780636154981,0.302323556964751,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0.164549020602121,0,0.23467170806371,0,0.220528398054962,0,0.161464426695906,0.120625849856312,0,0,0,3.15223013417866,0,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0.218362563746178,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0.194451188344048,0.129159823477731,0,0.234714477291508,0,0,0,0,0,0,0.102710957164827,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0.335769232728157,0,0.375364950902364,0.183151624267265,0.214368379079066,0,0,0.460325236507177,0.572895513439397,0.515559547031063,0,0.755393897389701,0,0,0.453142408984205,0,0,0,0,0.243106717068294,0,0,1.11123363900808,0,0,0.505394423527595,0.25347929989024,0,0,0.192075457214608,0.402048282689293,0.952587382566147,0.463537303779422,0.192909220463705,0.824171801606613,0.147198920134397,0.342869252385415,0.177475806159338,0.238436189947321,0.436039249896986,0.564656282491984,0.338458431566706,0,0.263069711437843,0.135804113845862,0,0.474540072496697,0.0985044823755635,0,0.154936841185966,0.192906610981141,0.249810577937946,0.233931608445408,0.429742108096597,0.382576664137687,0.661774257358546,0 | |||
|short_description=p9@Tmbim1 | |||
}} |
Revision as of 23:53, 5 August 2015
Short description: | p9@Tmbim1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Tmbim1_5end |
Coexpression cluster: | MCL_coexpression_mm9:20 |
Association with transcript: | -90bp_to_ENSMUST00000152603_5end |
EntrezGene: | 69660 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 4.23e-22 | 3 |
Ontology term | p-value | n |
---|---|---|
raphe nuclei | 4.23e-22 | 3 |
reticular formation | 4.23e-22 | 3 |
central nervous system | 2.62e-09 | 73 |
nervous system | 4.91e-09 | 75 |
corpora quadrigemina | 8.81e-09 | 1 |
midbrain tectum | 8.81e-09 | 1 |
neural tube mantle layer | 8.81e-09 | 1 |
tectal plate | 8.81e-09 | 1 |
neural tube alar plate | 8.81e-09 | 1 |
regional part of midbrain | 2.91e-08 | 4 |
midbrain | 2.91e-08 | 4 |
presumptive midbrain | 2.91e-08 | 4 |
midbrain neural tube | 2.91e-08 | 4 |
regional part of nervous system | 4.11e-08 | 54 |
ectoderm-derived structure | 6.35e-07 | 95 |
ectoderm | 6.35e-07 | 95 |
presumptive ectoderm | 6.35e-07 | 95 |