FFCP PHASE1:Mm9::chr1:72757833..72757870,+: Difference between revisions
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{{FFCP|EntrezGene=19981,668941|HGNC=|MCL_coexpression_id=776|UniProt=P61514,Q4VAF2|association_with_transcript=0bp_to_ENSMUST00000059980,NM_009084,uc007bkv.2_5end|description=CAGE_peak_1_at_Gm14173_5end,CAGE_peak_1_at_Rpl37a_5end|id=chr1:72757833..72757870,+|ontology_enrichment_celltype=CL:0000144!3.31e-27!121;CL:0000012!3.31e-27!121;CL:0002371!1.77e-26!118;CL:0000548!6.37e-26!115;CL:0000004!6.37e-26!115;CL:0000255!6.37e-26!115;CL:0000034!2.27e-22!97;CL:0000723!1.14e-20!91;CL:0000048!1.14e-20!91;CL:0000219!1.69e-18!54;CL:0000063!3.30e-17!66;CL:0002320!1.48e-15!46;CL:0000134!1.48e-15!46;CL:0000988!5.35e-15!32;CL:0002032!5.35e-15!32;CL:0000037!5.35e-15!32;CL:0000566!5.35e-15!32;CL:0000837!5.35e-15!32;CL:0002031!1.66e-11!25;CL:0000049!1.39e-10!19;CL:0000763!7.59e-09!16;CL:0000055!2.50e-07!50;CL:0000839!4.30e-07!13;CL:0000738!9.31e-07!17;CL:0002087!9.31e-07!17|ontology_enrichment_celltype_v019_2=CL:0000034,2.27e-22,97;CL:0000723,1.14e-20,91;CL:0000048,1.14e-20,91;CL:0000219,1.69e-18,54;CL:0002320,1.48e-15,46;CL:0000134,1.48e-15,46;CL:0000988,5.35e-15,32;CL:0002032,5.35e-15,32;CL:0000037,5.35e-15,32;CL:0000837,5.35e-15,32;CL:0002031,1.66e-11,25;CL:0000049,1.39e-10,19;CL:0000763,7.59e-09,16;CL:0000839,4.30e-07,13;CL:0000738,9.31e-07,17;CL:0002087,9.31e-07,17|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!1.48e-15!46;UBERON:0002204!4.97e-09!32;UBERON:0002371!1.69e-08!16;UBERON:0001474!1.52e-07!22;UBERON:0004765!1.52e-07!22;UBERON:0001434!1.52e-07!22;UBERON:0002390!1.91e-07!45;UBERON:0003061!1.91e-07!45;UBERON:0002193!3.45e-07!48|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.48e-15,46;UBERON:0002204,4.97e-09,32;UBERON:0002371,1.69e-08,16;UBERON:0001474,1.52e-07,22;UBERON:0004765,1.52e-07,22;UBERON:0001434,1.52e-07,22;UBERON:0002390,1.91e-07,45;UBERON:0003061,1.91e-07,45;UBERON:0002193,3.45e-07,48;UBERON:0002405,3.45e-07,48|phase1_expression=37.7951279167314,13.2610654902957,20.4749657725291,6.95667686005709,13.5241847085514,25.3497700586954,38.0788604170707,35.5089139464335,70.6759385201367,46.5788407380767,63.0082123069858,45.7892192633231,54.7842335779858,31.9958672853531,45.6360373687458,54.8707974626428,51.7675789814828,55.6790721857289,46.8931362931627,81.4828131452218,22.9616883407888,39.1206347731488,61.6431502367887,34.3983709005824,38.9995777814189,43.0673973086265,48.6761055659754,30.3814438087104,31.1638407908453,37.3004592044698,60.3106988982429,54.6126379175283,83.6488111115015,95.0890086092632,45.3497043009501,57.3509526486799,46.9589519403449,25.5304294749514,47.6614560159518,28.2702821745851,20.5881020810855,19.8083190637949,19.9059244742773,41.9236403858672,38.5232338634155,44.4183140231269,61.8089162034951,45.3492325271329,26.5820281108711,41.6079984018967,64.5337403692921,44.5632949531412,50.1669992112632,44.247090662692,34.6176613116738,50.9373683351175,38.1089475118546,56.7239301505187,24.2779753031517,30.6814767977779,40.5652098243955,74.2069525231399,68.4756993005577,50.3943841677583,58.3431153914515,51.8650483910653,50.6324186776104,33.0427742576537,28.3072641602144,41.3118171294973,31.3384192413559,42.5619966761667,48.591079009355,29.6427734100189,42.2678527190422,21.1420320920305,22.0231761998777,16.8547286272448,23.1945865216928,25.3221672441972,34.4908416381084,38.5475894212002,39.3648028591947,47.2720592426611,30.1012548120316,29.4628585473668,25.6269025438385,30.383109669524,57.5519069332199,32.2690561655974,19.1310562543107,35.2773789562368,16.9992833426938,28.0645659651665,12.3457519315057,11.6486990645307,14.0444420131752,36.1312283865482,102.615471818133,72.7879523491301,46.0557982669745,47.4807966432976,17.8363667794652,28.4426681261332,109.760957792686,92.476350898411,111.215377903252,15.0722721229159,8.80388804400384,10.2425075954729,36.6054039476547,36.5358573974569,22.1390877365816,27.8836885022352,14.9337658062345,9.55066094105534,10.6293836125781,8.38676270135488,30.9613693182456,19.5737888436365,17.4464799583711,26.6681389224372,74.5567044872489,10.5401086924157,11.9384622883669,17.8819938646014,54.2762514011819,89.3855069180177,62.5185517199478,12.7322043494099,13.7250180845588,22.7434377324285,12.1677024134594,10.4843337505436,13.2984348518118,12.8170597823529,26.8855920564835,15.7996852674818,31.3376220457757,10.9429765060966,28.4963770088321,39.3132598581239,21.7875177064473,20.4958552256572,14.6278473175355,18.4483757210184,17.3348190435498,8.79591460512653,21.5567992932842,15.3175924935934,19.1786725338704,36.3864915829774,20.5754964426942,15.3230953269753,14.8163138213719,37.4184421618767,82.1589429156485,76.4323284130704,53.9910648851626,18.2270679831242,22.045449638223,28.0896815879183,13.494449928357,18.8893662477508,24.065669610431,19.5328513590343,15.5598572811779,20.3171695718875,15.7977455916941,14.4467368389604,12.9710095273369,14.1813987802572,12.2948064562988,12.7496097822353,12.4071069652835,16.2589287559269,7.59963200862735,12.9580777665137,29.2204903233271,29.4940573262757,18.8146493530256,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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:19981,entrezgene:668941 | |||
|HGNC= | |||
|MCL_coexpression_id=776 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P61514,uniprot:Q4VAF2 | |||
|association_with_transcript=0bp_to_ENSMUST00000059980,NM_009084,uc007bkv.2_5end | |||
|cluster_id=chr1:72757833..72757870,+ | |||
|description=CAGE_peak_1_at_Gm14173_5end,CAGE_peak_1_at_Rpl37a_5end | |||
|id=chr1:72757833..72757870,+ | |||
|ontology_enrichment_celltype=CL:0000144!3.31e-27!121;CL:0000012!3.31e-27!121;CL:0002371!1.77e-26!118;CL:0000548!6.37e-26!115;CL:0000004!6.37e-26!115;CL:0000255!6.37e-26!115;CL:0000034!2.27e-22!97;CL:0000723!1.14e-20!91;CL:0000048!1.14e-20!91;CL:0000219!1.69e-18!54;CL:0000063!3.30e-17!66;CL:0002320!1.48e-15!46;CL:0000134!1.48e-15!46;CL:0000988!5.35e-15!32;CL:0002032!5.35e-15!32;CL:0000037!5.35e-15!32;CL:0000566!5.35e-15!32;CL:0000837!5.35e-15!32;CL:0002031!1.66e-11!25;CL:0000049!1.39e-10!19;CL:0000763!7.59e-09!16;CL:0000055!2.50e-07!50;CL:0000839!4.30e-07!13;CL:0000738!9.31e-07!17;CL:0002087!9.31e-07!17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000034,2.27e-22,97;CL:0000723,1.14e-20,91;CL:0000048,1.14e-20,91;CL:0000219,1.69e-18,54;CL:0002320,1.48e-15,46;CL:0000134,1.48e-15,46;CL:0000988,5.35e-15,32;CL:0002032,5.35e-15,32;CL:0000037,5.35e-15,32;CL:0000837,5.35e-15,32;CL:0002031,1.66e-11,25;CL:0000049,1.39e-10,19;CL:0000763,7.59e-09,16;CL:0000839,4.30e-07,13;CL:0000738,9.31e-07,17;CL:0002087,9.31e-07,17 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!1.48e-15!46;UBERON:0002204!4.97e-09!32;UBERON:0002371!1.69e-08!16;UBERON:0001474!1.52e-07!22;UBERON:0004765!1.52e-07!22;UBERON:0001434!1.52e-07!22;UBERON:0002390!1.91e-07!45;UBERON:0003061!1.91e-07!45;UBERON:0002193!3.45e-07!48 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.48e-15,46;UBERON:0002204,4.97e-09,32;UBERON:0002371,1.69e-08,16;UBERON:0001474,1.52e-07,22;UBERON:0004765,1.52e-07,22;UBERON:0001434,1.52e-07,22;UBERON:0002390,1.91e-07,45;UBERON:0003061,1.91e-07,45;UBERON:0002193,3.45e-07,48;UBERON:0002405,3.45e-07,48 | |||
|phase1_expression=37.7951279167314,13.2610654902957,20.4749657725291,6.95667686005709,13.5241847085514,25.3497700586954,38.0788604170707,35.5089139464335,70.6759385201367,46.5788407380767,63.0082123069858,45.7892192633231,54.7842335779858,31.9958672853531,45.6360373687458,54.8707974626428,51.7675789814828,55.6790721857289,46.8931362931627,81.4828131452218,22.9616883407888,39.1206347731488,61.6431502367887,34.3983709005824,38.9995777814189,43.0673973086265,48.6761055659754,30.3814438087104,31.1638407908453,37.3004592044698,60.3106988982429,54.6126379175283,83.6488111115015,95.0890086092632,45.3497043009501,57.3509526486799,46.9589519403449,25.5304294749514,47.6614560159518,28.2702821745851,20.5881020810855,19.8083190637949,19.9059244742773,41.9236403858672,38.5232338634155,44.4183140231269,61.8089162034951,45.3492325271329,26.5820281108711,41.6079984018967,64.5337403692921,44.5632949531412,50.1669992112632,44.247090662692,34.6176613116738,50.9373683351175,38.1089475118546,56.7239301505187,24.2779753031517,30.6814767977779,40.5652098243955,74.2069525231399,68.4756993005577,50.3943841677583,58.3431153914515,51.8650483910653,50.6324186776104,33.0427742576537,28.3072641602144,41.3118171294973,31.3384192413559,42.5619966761667,48.591079009355,29.6427734100189,42.2678527190422,21.1420320920305,22.0231761998777,16.8547286272448,23.1945865216928,25.3221672441972,34.4908416381084,38.5475894212002,39.3648028591947,47.2720592426611,30.1012548120316,29.4628585473668,25.6269025438385,30.383109669524,57.5519069332199,32.2690561655974,19.1310562543107,35.2773789562368,16.9992833426938,28.0645659651665,12.3457519315057,11.6486990645307,14.0444420131752,36.1312283865482,102.615471818133,72.7879523491301,46.0557982669745,47.4807966432976,17.8363667794652,28.4426681261332,109.760957792686,92.476350898411,111.215377903252,15.0722721229159,8.80388804400384,10.2425075954729,36.6054039476547,36.5358573974569,22.1390877365816,27.8836885022352,14.9337658062345,9.55066094105534,10.6293836125781,8.38676270135488,30.9613693182456,19.5737888436365,17.4464799583711,26.6681389224372,74.5567044872489,10.5401086924157,11.9384622883669,17.8819938646014,54.2762514011819,89.3855069180177,62.5185517199478,12.7322043494099,13.7250180845588,22.7434377324285,12.1677024134594,10.4843337505436,13.2984348518118,12.8170597823529,26.8855920564835,15.7996852674818,31.3376220457757,10.9429765060966,28.4963770088321,39.3132598581239,21.7875177064473,20.4958552256572,14.6278473175355,18.4483757210184,17.3348190435498,8.79591460512653,21.5567992932842,15.3175924935934,19.1786725338704,36.3864915829774,20.5754964426942,15.3230953269753,14.8163138213719,37.4184421618767,82.1589429156485,76.4323284130704,53.9910648851626,18.2270679831242,22.045449638223,28.0896815879183,13.494449928357,18.8893662477508,24.065669610431,19.5328513590343,15.5598572811779,20.3171695718875,15.7977455916941,14.4467368389604,12.9710095273369,14.1813987802572,12.2948064562988,12.7496097822353,12.4071069652835,16.2589287559269,7.59963200862735,12.9580777665137,29.2204903233271,29.4940573262757,18.8146493530256,19.7649854130876,18.4573776391242,20.1639163679313,16.6085171540579,26.3518327558417,24.8821856712267,22.8799942847323,17.1568396664826,25.1669434423182,17.5071820398502,14.9355954940775,35.6575653791794,34.6172993207478,18.0332377076929,21.7906920794486,29.8686830238144,20.9004743273149,12.9634901104727,16.5323365737154,13.3448918665169,13.8204823592417,16.008441862706,29.5315837117486,32.6287931887917,30.3563851719553,27.5889765088364,26.7706647325183,35.1383675458359,30.4957905697859,27.8872590053061,35.4184223012625,12.9391385874619,11.5363693777236,23.7148631567066,10.3557339958316,15.4281775628844,12.5435315554475,11.0851914099963,41.1196363541952,19.3928321966011,29.5356449248827,29.8056615326398,18.9282070909252,27.8511059836636,24.0014386865093,11.8226358079643,19.4888926890922,11.0023790373666,14.4199716949849,12.7786886580763,15.4774492682217,55.7927750575307,30.4587182938477,30.9811492001993,18.2118252561123,13.8073507389501,15.003095883802,68.0330023313203,13.6334300690361,31.8663301610419,30.0637833108412,20.0343759891503,24.1358485932078,24.0622568008986,25.7599643017838,22.6693992937941,28.9333299332199,20.1596766752727,12.8528526568723,9.509985708954,34.188595904113,26.5505743746329,16.0021019283359,23.8941249011933,38.3593405124871,54.4182402536552,51.6777918531161,36.322132824335,39.3516989368227,11.8877014857382,25.4473610634254,33.1542561897791,28.4433082142234,37.9506990869996,50.5364161916116,20.0859367394735,29.1698972330723,32.7277469970369,24.6487590286331,15.4286003268778,28.0039043635251,21.2268236576736,35.3179340972935,22.0591405579888,18.4293901651524,27.1249929607603,18.1374878235628,15.339120536111,16.1035509558176,20.6514155125426,12.9671310798598,16.6144076879015,12.9797711407357,28.5354370932414,32.8155120061524,25.0012611949111,37.2969544869288,24.0581840789004,32.2577224221197,33.6557291387834,30.6493680588811,32.8915937654529,19.09341236030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| |||
|short_description=p1@Gm14173,p1@Rpl37a | |||
}} |
Revision as of 23:11, 5 August 2015
Short description: | p1@Gm14173, p1@Rpl37a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gm14173_5end, CAGE_peak_1_at_Rpl37a_5end |
Coexpression cluster: | MCL_coexpression_mm9:776 |
Association with transcript: | 0bp_to_ENSMUST00000059980, NM_009084, uc007bkv.2_5end |
EntrezGene: | 19981,668941 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stem cell | 2.27e-22 | 97 |
somatic stem cell | 1.14e-20 | 91 |
multi fate stem cell | 1.14e-20 | 91 |
motile cell | 1.69e-18 | 54 |
connective tissue cell | 1.48e-15 | 46 |
mesenchymal cell | 1.48e-15 | 46 |
hematopoietic cell | 5.35e-15 | 32 |
hematopoietic oligopotent progenitor cell | 5.35e-15 | 32 |
hematopoietic stem cell | 5.35e-15 | 32 |
hematopoietic multipotent progenitor cell | 5.35e-15 | 32 |
hematopoietic lineage restricted progenitor cell | 1.66e-11 | 25 |
common myeloid progenitor | 1.39e-10 | 19 |
myeloid cell | 7.59e-09 | 16 |
myeloid lineage restricted progenitor cell | 4.30e-07 | 13 |
leukocyte | 9.31e-07 | 17 |
nongranular leukocyte | 9.31e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.48e-15 | 46 |
musculoskeletal system | 4.97e-09 | 32 |
bone marrow | 1.69e-08 | 16 |
bone element | 1.52e-07 | 22 |
skeletal element | 1.52e-07 | 22 |
skeletal system | 1.52e-07 | 22 |
hematopoietic system | 1.91e-07 | 45 |
blood island | 1.91e-07 | 45 |
hemolymphoid system | 3.45e-07 | 48 |
immune system | 3.45e-07 | 48 |