FFCP PHASE1:Mm9::chr1:69806225..69806237,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=29|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:69806225..69806237,-|id=chr1:69806225..69806237,-|ontology_enrichment_celltype=CL:0000791!2.14e-27!9;CL:0000789!2.14e-27!9;CL:0002420!2.14e-27!9;CL:0002419!2.14e-27!9;CL:0000790!2.14e-27!9;CL:0000084!2.17e-22!11;CL:0000827!2.17e-22!11;CL:0000624!1.71e-21!8;CL:0000838!1.64e-20!12;CL:0000542!6.40e-19!13;CL:0000051!6.40e-19!13;CL:0000738!2.03e-14!17;CL:0002087!2.03e-14!17;CL:0000893!1.10e-10!6;CL:0002489!1.10e-10!6;CL:0000898!1.10e-10!6;CL:0000809!1.10e-10!6;CL:0000810!1.10e-10!6;CL:0000895!1.10e-10!6;CL:0000808!1.10e-10!6;CL:0000894!1.10e-10!6;CL:0000806!1.10e-10!6;CL:0000807!1.10e-10!6;CL:0000805!1.10e-10!6;CL:0002425!1.10e-10!6;CL:0002436!1.10e-10!6;CL:0002427!1.10e-10!6;CL:0002428!1.10e-10!6;CL:0002429!1.10e-10!6;CL:0002433!1.10e-10!6;CL:0002431!1.10e-10!6;CL:0002432!1.10e-10!6;CL:0002031!1.02e-09!25;CL:0000815!1.56e-08!1;CL:0000792!1.56e-08!1;CL:0000625!1.84e-08!1;CL:0000988!1.61e-07!32;CL:0002032!1.61e-07!32;CL:0000037!1.61e-07!32;CL:0000566!1.61e-07!32;CL:0000837!1.61e-07!32|ontology_enrichment_celltype_v019_2=CL:0000815,2.74e-44,1;CL:0000792,2.74e-44,1;CL:0000625,7.47e-44,1;CL:0000791,1.98e-20,9;CL:0000789,1.98e-20,9;CL:0002420,1.98e-20,9;CL:0002419,1.98e-20,9;CL:0000790,1.98e-20,9;CL:0000084,5.67e-17,11;CL:0000827,5.67e-17,11;CL:0000838,1.13e-15,12;CL:0000542,1.42e-14,13;CL:0000051,1.42e-14,13;CL:0000738,1.86e-11,17;CL:0002087,1.86e-11,17;CL:0002031,3.41e-08,25;CL:0000624,8.61e-07,8|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002370!7.38e-18!23;UBERON:0000974!7.38e-18!23;UBERON:0004807!7.38e-18!23;UBERON:0005058!7.38e-18!23;UBERON:0003351!7.38e-18!23;UBERON:0009113!7.38e-18!23;UBERON:0003295!7.38e-18!23;UBERON:0009722!7.38e-18!23;UBERON:0005562!7.38e-18!23;UBERON:0007690!7.38e-18!23;UBERON:0006562!4.34e-17!24;UBERON:0003408!4.34e-17!24;UBERON:0001557!4.34e-17!24;UBERON:0001042!4.34e-17!24;UBERON:0008814!4.34e-17!24;UBERON:0009145!4.34e-17!24;UBERON:0000072!4.02e-15!27;UBERON:0004177!4.90e-14!29;UBERON:0000063!1.62e-11!35;UBERON:0002193!1.96e-10!48;UBERON:0005057!8.60e-10!51;UBERON:0000065!9.91e-10!41;UBERON:0001004!1.76e-09!42;UBERON:0003929!5.15e-09!55;UBERON:0002390!8.41e-09!45;UBERON:0003061!8.41e-09!45;UBERON:0002405!1.36e-08!70;UBERON:0002368!3.46e-08!60;UBERON:0000029!4.10e-08!1;UBERON:0001097!4.10e-08!1;UBERON:0003968!4.10e-08!1;UBERON:0008785!4.10e-08!1;UBERON:0001467!4.10e-08!1;UBERON:0001421!4.10e-08!1;UBERON:0002530!1.74e-07!65;UBERON:0000490!2.34e-07!66;UBERON:0005911!5.37e-07!69|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,13.0414556675992,0.140788722151667,0,0,0,0.342401459862411,0.174840804837995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725362142011344,2.68875039313971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0.25984164595559,0,0,0,0.147689527174577,0,0.15241361331,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr1:69806225..69806237,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=29 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:69806225..69806237,- | |||
|description=CAGE_peak_at_chr1:69806225..69806237,- | |||
|id=chr1:69806225..69806237,- | |||
|ontology_enrichment_celltype=CL:0000791!2.14e-27!9;CL:0000789!2.14e-27!9;CL:0002420!2.14e-27!9;CL:0002419!2.14e-27!9;CL:0000790!2.14e-27!9;CL:0000084!2.17e-22!11;CL:0000827!2.17e-22!11;CL:0000624!1.71e-21!8;CL:0000838!1.64e-20!12;CL:0000542!6.40e-19!13;CL:0000051!6.40e-19!13;CL:0000738!2.03e-14!17;CL:0002087!2.03e-14!17;CL:0000893!1.10e-10!6;CL:0002489!1.10e-10!6;CL:0000898!1.10e-10!6;CL:0000809!1.10e-10!6;CL:0000810!1.10e-10!6;CL:0000895!1.10e-10!6;CL:0000808!1.10e-10!6;CL:0000894!1.10e-10!6;CL:0000806!1.10e-10!6;CL:0000807!1.10e-10!6;CL:0000805!1.10e-10!6;CL:0002425!1.10e-10!6;CL:0002436!1.10e-10!6;CL:0002427!1.10e-10!6;CL:0002428!1.10e-10!6;CL:0002429!1.10e-10!6;CL:0002433!1.10e-10!6;CL:0002431!1.10e-10!6;CL:0002432!1.10e-10!6;CL:0002031!1.02e-09!25;CL:0000815!1.56e-08!1;CL:0000792!1.56e-08!1;CL:0000625!1.84e-08!1;CL:0000988!1.61e-07!32;CL:0002032!1.61e-07!32;CL:0000037!1.61e-07!32;CL:0000566!1.61e-07!32;CL:0000837!1.61e-07!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000815,2.74e-44,1;CL:0000792,2.74e-44,1;CL:0000625,7.47e-44,1;CL:0000791,1.98e-20,9;CL:0000789,1.98e-20,9;CL:0002420,1.98e-20,9;CL:0002419,1.98e-20,9;CL:0000790,1.98e-20,9;CL:0000084,5.67e-17,11;CL:0000827,5.67e-17,11;CL:0000838,1.13e-15,12;CL:0000542,1.42e-14,13;CL:0000051,1.42e-14,13;CL:0000738,1.86e-11,17;CL:0002087,1.86e-11,17;CL:0002031,3.41e-08,25;CL:0000624,8.61e-07,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!7.38e-18!23;UBERON:0000974!7.38e-18!23;UBERON:0004807!7.38e-18!23;UBERON:0005058!7.38e-18!23;UBERON:0003351!7.38e-18!23;UBERON:0009113!7.38e-18!23;UBERON:0003295!7.38e-18!23;UBERON:0009722!7.38e-18!23;UBERON:0005562!7.38e-18!23;UBERON:0007690!7.38e-18!23;UBERON:0006562!4.34e-17!24;UBERON:0003408!4.34e-17!24;UBERON:0001557!4.34e-17!24;UBERON:0001042!4.34e-17!24;UBERON:0008814!4.34e-17!24;UBERON:0009145!4.34e-17!24;UBERON:0000072!4.02e-15!27;UBERON:0004177!4.90e-14!29;UBERON:0000063!1.62e-11!35;UBERON:0002193!1.96e-10!48;UBERON:0005057!8.60e-10!51;UBERON:0000065!9.91e-10!41;UBERON:0001004!1.76e-09!42;UBERON:0003929!5.15e-09!55;UBERON:0002390!8.41e-09!45;UBERON:0003061!8.41e-09!45;UBERON:0002405!1.36e-08!70;UBERON:0002368!3.46e-08!60;UBERON:0000029!4.10e-08!1;UBERON:0001097!4.10e-08!1;UBERON:0003968!4.10e-08!1;UBERON:0008785!4.10e-08!1;UBERON:0001467!4.10e-08!1;UBERON:0001421!4.10e-08!1;UBERON:0002530!1.74e-07!65;UBERON:0000490!2.34e-07!66;UBERON:0005911!5.37e-07!69 | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,13.0414556675992,0.140788722151667,0,0,0,0.342401459862411,0.174840804837995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725362142011344,2.68875039313971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0.25984164595559,0,0,0,0.147689527174577,0,0.15241361331,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:69806225..69806237,- | |||
}} |
Latest revision as of 22:26, 5 August 2015
Short description: | p@chr1:69806225..69806237, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:69806225..69806237, - |
Coexpression cluster: | MCL_coexpression_mm9:29 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regulatory T cell | 2.74e-44 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 2.74e-44 | 1 |
CD8-positive, alpha-beta T cell | 7.47e-44 | 1 |
mature alpha-beta T cell | 1.98e-20 | 9 |
alpha-beta T cell | 1.98e-20 | 9 |
immature T cell | 1.98e-20 | 9 |
mature T cell | 1.98e-20 | 9 |
immature alpha-beta T cell | 1.98e-20 | 9 |
T cell | 5.67e-17 | 11 |
pro-T cell | 5.67e-17 | 11 |
lymphoid lineage restricted progenitor cell | 1.13e-15 | 12 |
lymphocyte | 1.42e-14 | 13 |
common lymphoid progenitor | 1.42e-14 | 13 |
leukocyte | 1.86e-11 | 17 |
nongranular leukocyte | 1.86e-11 | 17 |
hematopoietic lineage restricted progenitor cell | 3.41e-08 | 25 |
CD4-positive, alpha-beta T cell | 8.61e-07 | 8 |