FFCP PHASE1:Mm9::chr13:35754002..35754007,+: Difference between revisions
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{{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=432|UniProt=|association_with_transcript=0bp_to_ENSMUST00000083244_5end|description=CAGE_peak_1_at_ENSMUST00000083244_5end|id=chr13:35754002..35754007,+|ontology_enrichment_celltype=CL:0000548!5.18e-29!115;CL:0000004!5.18e-29!115;CL:0000255!5.18e-29!115;CL:0000723!1.41e-27!91;CL:0000048!1.41e-27!91;CL:0002371!1.49e-27!118;CL:0000034!2.07e-26!97;CL:0000144!3.57e-26!121;CL:0000012!3.57e-26!121;CL:0000055!9.06e-23!50;CL:0002321!4.56e-22!70;CL:0000220!4.56e-22!70;CL:0002319!4.63e-22!43;CL:0000393!2.77e-21!39;CL:0000211!2.77e-21!39;CL:0000221!3.25e-21!44;CL:0000133!3.25e-21!44;CL:0000540!5.36e-20!33;CL:0000047!5.36e-20!33;CL:0000031!5.36e-20!33;CL:0000404!5.36e-20!33;CL:0000117!3.56e-15!23;CL:0000337!3.56e-15!23;CL:0000219!1.03e-10!54;CL:0002320!3.25e-09!46;CL:0000134!3.25e-09!46;CL:0002031!4.50e-07!25;CL:0000107!6.30e-07!9;CL:0000063!8.41e-07!66|ontology_enrichment_celltype_v019_2=CL:0002319,3.14e-20,43;CL:0000221,1.26e-19,44;CL:0000133,1.26e-19,44;CL:0002321,2.01e-17,70;CL:0000540,2.23e-17,33;CL:0000047,2.23e-17,33;CL:0000031,2.23e-17,33;CL:0000404,2.23e-17,33;CL:0000723,3.43e-17,91;CL:0000048,3.43e-17,91;CL:0000393,3.72e-17,39;CL:0000211,3.72e-17,39;CL:0000117,1.18e-16,23;CL:0000337,1.18e-16,23;CL:0000034,1.35e-15,97;CL:0000764,1.33e-07,3;CL:0000765,1.33e-07,3;CL:0000038,1.33e-07,3;CL:0000547,1.33e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:2531,1.33e-07,3;DOID:0060083,1.33e-07,3;DOID:1240,1.33e-07,3|ontology_enrichment_uberon=UBERON:0001017!1.51e-19!73;UBERON:0005743!1.51e-19!73;UBERON:0000073!1.61e-18!75;UBERON:0001016!1.61e-18!75;UBERON:0002020!1.25e-16!34;UBERON:0002791!2.87e-13!29;UBERON:0003528!2.87e-13!29;UBERON:0001893!2.87e-13!29;UBERON:0000956!3.77e-12!21;UBERON:0001869!3.77e-12!21;UBERON:0000203!3.77e-12!21;UBERON:0002619!1.86e-11!17;UBERON:0004121!1.76e-10!102;UBERON:0000924!1.76e-10!102;UBERON:0006601!1.76e-10!102;UBERON:0001049!1.91e-10!52;UBERON:0005068!1.91e-10!52;UBERON:0006241!1.91e-10!52;UBERON:0007135!1.91e-10!52;UBERON:0002021!3.72e-10!10;UBERON:0000411!3.72e-10!10;UBERON:0001950!3.72e-10!10;UBERON:0002616!1.12e-09!49;UBERON:0000955!2.83e-09!50;UBERON:0006238!2.83e-09!50;UBERON:0002384!3.25e-09!46;UBERON:0002780!1.72e-08!39;UBERON:0001890!1.72e-08!39;UBERON:0006240!1.72e-08!39;UBERON:0002346!3.11e-08!71;UBERON:0003075!3.11e-08!71;UBERON:0007284!3.11e-08!71;UBERON:0003080!4.54e-08!40;UBERON:0002410!6.30e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.07e-24,34;UBERON:0001017,3.60e-22,73;UBERON:0001016,2.37e-21,75;UBERON:0002619,2.58e-20,17;UBERON:0003528,2.92e-20,29;UBERON:0002791,2.92e-20,29;UBERON:0001893,2.92e-20,29;UBERON:0000956,3.42e-18,21;UBERON:0001869,3.42e-18,21;UBERON:0000203,3.42e-18,21;UBERON:0000073,2.81e-16,54;UBERON:0002021,5.19e-16,10;UBERON:0000411,5.19e-16,10;UBERON:0001950,5.19e-16,10;UBERON:0001049,2.02e-15,52;UBERON:0005068,2.02e-15,52;UBERON:0006241,2.02e-15,52;UBERON:0007135,2.02e-15,52;UBERON:0004121,4.49e-15,95;UBERON:0000924,4.49e-15,95;UBERON:0006601,4.49e-15,95;UBERON:0002346,7.11e-14,64;UBERON:0003075,7.11e-14,64;UBERON:0007284,7.11e-14,64;UBERON:0002780,9.08e-14,39;UBERON:0001890,9.08e-14,39;UBERON:0006240,9.08e-14,39;UBERON:0003080,2.67e-13,40;UBERON:0002616,3.40e-12,46;UBERON:0000955,7.94e-12,47;UBERON:0006238,7.94e-12,47;UBERON:0010371,2.36e-11,73;UBERON:0003056,5.79e-10,49;UBERON:0010314,2.52e-09,92;UBERON:0000025,4.63e-07,114|phase1_expression=0,0,0,0,0.500895729946347,0,0.233612640595526,0.258246646883153,0.422366166455,0,0.68487187290202,0.0797721589953364,0.171200729931206,0.34968160967599,0.666219523631325,0.202475267389826,0,0.157731082679119,0.137114433605739,0,0,0.198581902401771,0.261199789138935,0,0,0,0,0,0,0,0,13.9706748161119,4.92051830067656,15.8481681015439,0,0,0.204169356262369,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,0.782391344348039,1.30815093828268,1.97717564461025,1.55543919259427,1.67983705950435,0,0.167782606057736,0,0,0.771778308107841,1.14613375975503,1.54701627683233,2.63011399117477,1.5869729378161,1.26766280701236,0.338844532069132,2.66788438833342,1.3498495759221,2.96659908770092,2.8419204597844,0.599200221036809,1.15265491596466,0.622137673850866,2.02508907497536,0.420649922702764,1.42825492201902,0.883474163806454,2.57230678351403,1.43768206527355,1.83843757322004,4.40463523997555,0.510749352340751,0.614426133024974,3.56092976871523,2.74462930807229,2.6045668527838,1.11673199600552,0,0.916789486660861,1.76777151284201,1.28134512719193,1.67759501242771,0,0,0,0,0.679971333707751,1.07940638327563,5.84798775702902,8.51251085484938,0.140444420131752,0,0.259786004602869,0.70667914902068,0,0,0,0,1.08245520505607,0.760079596425296,0.505524445014783,0.11418387971906,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0.292780797011547,0,0.255457055208591,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0.130120442962704,0.229902104433473,0,0,0,0,0,0,0,0,0,0.219195732427575,0,0,0,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0.134206418760372,0,0,0,0,0,0.232236671860439,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0,0.172684981865896,0,1.50791283939272,2.71952841909355,0,0,0,0,0,0,0.94652465824877,1.95219372148319,1.93881057959519,1.43381278771531,0.668396022247182,0.849229592366497,0.809621403349789,0.292255857911312,2.76701444562566,0,0,0,0,0,0,0,0,0.188605079755898,0,0.307435147943927,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0.608929898229199,0.23467170806371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0.56369293868419,0,0,0,0,0.168956125490778,0,0.13020438484395,0,0,0,0,0,0.205421914329655,0,0,0.198681354781265,0.240390899039938,0,0.100966449948148,0.0762068066549998,0,0,0.0962118416403295,0,0,0.443971906748129,0.269141569828427,0,0.19318959403219,0,0,0,0,2.82375921308533,0.920650473014354,3.43737308063638,3.78077001156113,4.7955776383945,9.82012066606611,3.37511250115903,3.15224842256954,2.71885445390523,3.10656187051092,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0|short_description=p1@ENSMUST00000083244}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=432 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000083244_5end | |||
|cluster_id=chr13:35754002..35754007,+ | |||
|description=CAGE_peak_1_at_ENSMUST00000083244_5end | |||
|id=chr13:35754002..35754007,+ | |||
|ontology_enrichment_celltype=CL:0000548!5.18e-29!115;CL:0000004!5.18e-29!115;CL:0000255!5.18e-29!115;CL:0000723!1.41e-27!91;CL:0000048!1.41e-27!91;CL:0002371!1.49e-27!118;CL:0000034!2.07e-26!97;CL:0000144!3.57e-26!121;CL:0000012!3.57e-26!121;CL:0000055!9.06e-23!50;CL:0002321!4.56e-22!70;CL:0000220!4.56e-22!70;CL:0002319!4.63e-22!43;CL:0000393!2.77e-21!39;CL:0000211!2.77e-21!39;CL:0000221!3.25e-21!44;CL:0000133!3.25e-21!44;CL:0000540!5.36e-20!33;CL:0000047!5.36e-20!33;CL:0000031!5.36e-20!33;CL:0000404!5.36e-20!33;CL:0000117!3.56e-15!23;CL:0000337!3.56e-15!23;CL:0000219!1.03e-10!54;CL:0002320!3.25e-09!46;CL:0000134!3.25e-09!46;CL:0002031!4.50e-07!25;CL:0000107!6.30e-07!9;CL:0000063!8.41e-07!66 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,3.14e-20,43;CL:0000221,1.26e-19,44;CL:0000133,1.26e-19,44;CL:0002321,2.01e-17,70;CL:0000540,2.23e-17,33;CL:0000047,2.23e-17,33;CL:0000031,2.23e-17,33;CL:0000404,2.23e-17,33;CL:0000723,3.43e-17,91;CL:0000048,3.43e-17,91;CL:0000393,3.72e-17,39;CL:0000211,3.72e-17,39;CL:0000117,1.18e-16,23;CL:0000337,1.18e-16,23;CL:0000034,1.35e-15,97;CL:0000764,1.33e-07,3;CL:0000765,1.33e-07,3;CL:0000038,1.33e-07,3;CL:0000547,1.33e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.33e-07,3;DOID:0060083,1.33e-07,3;DOID:1240,1.33e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0001017!1.51e-19!73;UBERON:0005743!1.51e-19!73;UBERON:0000073!1.61e-18!75;UBERON:0001016!1.61e-18!75;UBERON:0002020!1.25e-16!34;UBERON:0002791!2.87e-13!29;UBERON:0003528!2.87e-13!29;UBERON:0001893!2.87e-13!29;UBERON:0000956!3.77e-12!21;UBERON:0001869!3.77e-12!21;UBERON:0000203!3.77e-12!21;UBERON:0002619!1.86e-11!17;UBERON:0004121!1.76e-10!102;UBERON:0000924!1.76e-10!102;UBERON:0006601!1.76e-10!102;UBERON:0001049!1.91e-10!52;UBERON:0005068!1.91e-10!52;UBERON:0006241!1.91e-10!52;UBERON:0007135!1.91e-10!52;UBERON:0002021!3.72e-10!10;UBERON:0000411!3.72e-10!10;UBERON:0001950!3.72e-10!10;UBERON:0002616!1.12e-09!49;UBERON:0000955!2.83e-09!50;UBERON:0006238!2.83e-09!50;UBERON:0002384!3.25e-09!46;UBERON:0002780!1.72e-08!39;UBERON:0001890!1.72e-08!39;UBERON:0006240!1.72e-08!39;UBERON:0002346!3.11e-08!71;UBERON:0003075!3.11e-08!71;UBERON:0007284!3.11e-08!71;UBERON:0003080!4.54e-08!40;UBERON:0002410!6.30e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.07e-24,34;UBERON:0001017,3.60e-22,73;UBERON:0001016,2.37e-21,75;UBERON:0002619,2.58e-20,17;UBERON:0003528,2.92e-20,29;UBERON:0002791,2.92e-20,29;UBERON:0001893,2.92e-20,29;UBERON:0000956,3.42e-18,21;UBERON:0001869,3.42e-18,21;UBERON:0000203,3.42e-18,21;UBERON:0000073,2.81e-16,54;UBERON:0002021,5.19e-16,10;UBERON:0000411,5.19e-16,10;UBERON:0001950,5.19e-16,10;UBERON:0001049,2.02e-15,52;UBERON:0005068,2.02e-15,52;UBERON:0006241,2.02e-15,52;UBERON:0007135,2.02e-15,52;UBERON:0004121,4.49e-15,95;UBERON:0000924,4.49e-15,95;UBERON:0006601,4.49e-15,95;UBERON:0002346,7.11e-14,64;UBERON:0003075,7.11e-14,64;UBERON:0007284,7.11e-14,64;UBERON:0002780,9.08e-14,39;UBERON:0001890,9.08e-14,39;UBERON:0006240,9.08e-14,39;UBERON:0003080,2.67e-13,40;UBERON:0002616,3.40e-12,46;UBERON:0000955,7.94e-12,47;UBERON:0006238,7.94e-12,47;UBERON:0010371,2.36e-11,73;UBERON:0003056,5.79e-10,49;UBERON:0010314,2.52e-09,92;UBERON:0000025,4.63e-07,114 | |||
|phase1_expression=0,0,0,0,0.500895729946347,0,0.233612640595526,0.258246646883153,0.422366166455,0,0.68487187290202,0.0797721589953364,0.171200729931206,0.34968160967599,0.666219523631325,0.202475267389826,0,0.157731082679119,0.137114433605739,0,0,0.198581902401771,0.261199789138935,0,0,0,0,0,0,0,0,13.9706748161119,4.92051830067656,15.8481681015439,0,0,0.204169356262369,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,0.782391344348039,1.30815093828268,1.97717564461025,1.55543919259427,1.67983705950435,0,0.167782606057736,0,0,0.771778308107841,1.14613375975503,1.54701627683233,2.63011399117477,1.5869729378161,1.26766280701236,0.338844532069132,2.66788438833342,1.3498495759221,2.96659908770092,2.8419204597844,0.599200221036809,1.15265491596466,0.622137673850866,2.02508907497536,0.420649922702764,1.42825492201902,0.883474163806454,2.57230678351403,1.43768206527355,1.83843757322004,4.40463523997555,0.510749352340751,0.614426133024974,3.56092976871523,2.74462930807229,2.6045668527838,1.11673199600552,0,0.916789486660861,1.76777151284201,1.28134512719193,1.67759501242771,0,0,0,0,0.679971333707751,1.07940638327563,5.84798775702902,8.51251085484938,0.140444420131752,0,0.259786004602869,0.70667914902068,0,0,0,0,1.08245520505607,0.760079596425296,0.505524445014783,0.11418387971906,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0.292780797011547,0,0.255457055208591,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0.130120442962704,0.229902104433473,0,0,0,0,0,0,0,0,0,0.219195732427575,0,0,0,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0.134206418760372,0,0,0,0,0,0.232236671860439,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0,0.172684981865896,0,1.50791283939272,2.71952841909355,0,0,0,0,0,0,0.94652465824877,1.95219372148319,1.93881057959519,1.43381278771531,0.668396022247182,0.849229592366497,0.809621403349789,0.292255857911312,2.76701444562566,0,0,0,0,0,0,0,0,0.188605079755898,0,0.307435147943927,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0.608929898229199,0.23467170806371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0.56369293868419,0,0,0,0,0.168956125490778,0,0.13020438484395,0,0,0,0,0,0.205421914329655,0,0,0.198681354781265,0.240390899039938,0,0.100966449948148,0.0762068066549998,0,0,0.0962118416403295,0,0,0.443971906748129,0.269141569828427,0,0.19318959403219,0,0,0,0,2.82375921308533,0.920650473014354,3.43737308063638,3.78077001156113,4.7955776383945,9.82012066606611,3.37511250115903,3.15224842256954,2.71885445390523,3.10656187051092,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0 | |||
|short_description=p1@ENSMUST00000083244 | |||
}} |
Latest revision as of 22:23, 5 August 2015
Short description: | p1@ENSMUST00000083244 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000083244_5end |
Coexpression cluster: | MCL_coexpression_mm9:432 |
Association with transcript: | 0bp_to_ENSMUST00000083244_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 3.14e-20 | 43 |
ectodermal cell | 1.26e-19 | 44 |
neurectodermal cell | 1.26e-19 | 44 |
embryonic cell | 2.01e-17 | 70 |
neuron | 2.23e-17 | 33 |
neuronal stem cell | 2.23e-17 | 33 |
neuroblast | 2.23e-17 | 33 |
electrically signaling cell | 2.23e-17 | 33 |
somatic stem cell | 3.43e-17 | 91 |
multi fate stem cell | 3.43e-17 | 91 |
electrically responsive cell | 3.72e-17 | 39 |
electrically active cell | 3.72e-17 | 39 |
CNS neuron (sensu Vertebrata) | 1.18e-16 | 23 |
neuroblast (sensu Vertebrata) | 1.18e-16 | 23 |
stem cell | 1.35e-15 | 97 |
erythroid lineage cell | 1.33e-07 | 3 |
erythroblast | 1.33e-07 | 3 |
erythroid progenitor cell | 1.33e-07 | 3 |
proerythroblast | 1.33e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
gray matter | 1.07e-24 | 34 |
central nervous system | 3.60e-22 | 73 |
nervous system | 2.37e-21 | 75 |
regional part of cerebral cortex | 2.58e-20 | 17 |
brain grey matter | 2.92e-20 | 29 |
regional part of telencephalon | 2.92e-20 | 29 |
telencephalon | 2.92e-20 | 29 |
cerebral cortex | 3.42e-18 | 21 |
cerebral hemisphere | 3.42e-18 | 21 |
pallium | 3.42e-18 | 21 |
regional part of nervous system | 2.81e-16 | 54 |
occipital lobe | 5.19e-16 | 10 |
visual cortex | 5.19e-16 | 10 |
neocortex | 5.19e-16 | 10 |
neural tube | 2.02e-15 | 52 |
neural rod | 2.02e-15 | 52 |
future spinal cord | 2.02e-15 | 52 |
neural keel | 2.02e-15 | 52 |
ectoderm-derived structure | 4.49e-15 | 95 |
ectoderm | 4.49e-15 | 95 |
presumptive ectoderm | 4.49e-15 | 95 |
neurectoderm | 7.11e-14 | 64 |
neural plate | 7.11e-14 | 64 |
presumptive neural plate | 7.11e-14 | 64 |
regional part of forebrain | 9.08e-14 | 39 |
forebrain | 9.08e-14 | 39 |
future forebrain | 9.08e-14 | 39 |
anterior neural tube | 2.67e-13 | 40 |
regional part of brain | 3.40e-12 | 46 |
brain | 7.94e-12 | 47 |
future brain | 7.94e-12 | 47 |
ecto-epithelium | 2.36e-11 | 73 |
pre-chordal neural plate | 5.79e-10 | 49 |
structure with developmental contribution from neural crest | 2.52e-09 | 92 |
tube | 4.63e-07 | 114 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.33e-07 | 3 |
immune system cancer | 1.33e-07 | 3 |
leukemia | 1.33e-07 | 3 |