FFCP PHASE1:Mm9::chr13:31717548..31717596,+: Difference between revisions
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{{FFCP|EntrezGene=14238|HGNC=|MCL_coexpression_id=2063|UniProt=O54743|association_with_transcript=-88bp_to_ENSMUST00000042054,NM_010225,uc007pzo.2_5end|description=CAGE_peak_1_at_Foxf2_5end|id=chr13:31717548..31717596,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002048!2.38e-10!14;UBERON:0000117!2.38e-10!14;UBERON:0000171!2.38e-10!14;UBERON:0000170!2.38e-10!14;UBERON:0005597!2.38e-10!14;UBERON:0000118!2.38e-10!14;UBERON:0005153!9.73e-08!17;UBERON:0000033!5.63e-07!63;UBERON:0005178!7.26e-07!17;UBERON:0005181!7.26e-07!17;UBERON:0002224!7.26e-07!17;UBERON:0000915!7.26e-07!17;UBERON:0008947!7.26e-07!17;UBERON:0003258!7.26e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0002048,3.26e-11,14;UBERON:0000117,3.26e-11,14;UBERON:0000171,3.26e-11,14;UBERON:0000170,3.26e-11,14;UBERON:0005597,3.26e-11,14;UBERON:0000118,3.26e-11,14;UBERON:0005153,1.05e-08,17;UBERON:0005178,6.83e-08,17;UBERON:0005181,6.83e-08,17;UBERON:0002224,6.83e-08,17;UBERON:0000915,6.83e-08,17;UBERON:0008947,6.83e-08,17;UBERON:0003258,6.83e-08,17|phase1_expression=86.3202285894839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57181818634493,0,0.261199789138935,0.159992422793407,0,0,0,0,0.190023419456374,1.51218077855958,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,6.16894408080329,7.40051597902456,8.9937908559224,18.7773922643529,0.436050312760893,0,0.777719596297134,2.65974201088189,0,0,0,0,2.31533492432352,0,3.6097046459421,2.22548106945558,4.7609188134483,2.53532561402472,9.14880236586657,5.33576877666684,0.449949858640699,0.988866362566974,0.7104801149461,1.49800055259202,1.92109152660777,3.31806759387129,3.91517221161903,6.52007380189284,5.42736870367227,2.87129103237098,2.08234358665422,4.2172007248024,3.67687514644008,3.30347642998166,4.85211884723713,2.30409799884365,5.67111037239834,3.47653045689157,3.64639359389732,3.35019598801657,3.93933827022176,2.75036845998258,4.71405736757868,3.98640706237488,4.65998614563251,1.4387976733305,1.36028808192214,0,0,0,0.539703191637817,0,0,2.10666630197628,14.4865774191349,8.3131521472918,8.83348936275851,1.83096445709685,5.13305909657271,2.54805239706646,0,0,0,0,1.82694207550496,0.258937883647172,0,0.173485326766136,0,0,0,0,0,2.71914464507811,0.433798070759735,0.884610551949874,0.647067399789637,0,0.484875253135222,5.59175283654366,3.51336956413857,3.97948742945565,11.240110429178,0,0,0,4.04434726393021,3.20250421973039,3.76963056338593,6.08385120672968,4.85859368927628,5.81806524766768,3.24482526135515,1.01839363850316,2.11491850037158,0,1.26265113531884,8.58794923553845,5.51765050640335,6.12211241338187,3.76762044589288,6.93972291343544,7.17436833595159,6.65282244374075,2.84573707812917,1.07783996466421,0.756424320671277,8.09375171154165,10.7405908889512,13.3462679628287,3.83077383174383,3.2925141825271,0.398068533636986,0,0,0,0.828503090142008,1.17263029990548,0,2.84093682702252,0,0,0.232533944750408,0.536546802799238,0,0.16455984991348,0,0.0810688095458557,0,0,0,4.83666881697493,6.79170441703277,0.330418782983798,10.0491215332147,57.8011158950484,44.3572043253438,36.3406240928303,29.445794595008,24.2392067790909,26.2511364035332,19.455691523325,19.7638745668813,25.8875265064278,24.6706025331027,24.7604390641283,13.4822911298133,12.752144942607,13.7407478545513,0.189667900953082,0.114248512609729,0,0,0,0.210407459670956,0,0,0,0,0,1.50160595144485,1.57247196090562,0.449724224769707,0,0,1.52775511068852,0.287696137450811,0,0.274561413188081,0,3.72140947668503,0,0,0,0,23.833161531492,17.2437184711141,35.3633998879196,32.5910564688361,33.3260152569673,30.1511263395268,32.8500224422699,31.8067846008212,66.049125380494,71.9760241358519,84.0326630824957,32.4449363137161,29.5291318990681,30.5209513606989,0,0,0,0,4.97706828962155,3.04750385139728,17.5410391553043,0,0.315508219416257,0.390438744296638,0.215423397732799,0.955875191810208,0,0,0,0.876767573733936,0.790575555893047,4.81981974632711,0,0.35613120733451,0.162886959353576,0.164970122972535,0,0.728341908464944,2.41858845571801,0,1.18120757152309,1.84461088766356,5.42699415653264,0,0,3.79244109522979,1.05418608574999,0,2.04263763452273,29.8901416091975,27.424040961944,18.8616590827801,24.1182717753492,19.4422011186257,15.9612549984057,21.0080814889074,0.23467170806371,1.69465656691056,3.08739757276947,0,1.61464426695906,0.904693873922338,0.477489376012546,0.328281799490123,20.4036585640896,5.00648315428376,0,0.619160603889667,0,0,0,0,0,0,0,20.0480829783174,50.9300949665628,27.6514475292514,28.1893939544901,25.5087721137652,27.076957904526,23.8709893101133,37.8552827222039,19.3699397068182,14.6464919819726,0,0,0,0,0.388902376688095,0,0.168956125490778,0,0.911430693907651,0,0,0,0,0,0.308132871494482,0,0,0.198681354781265,0,0,0.201932899896295,0.15241361331,0,0,0,0.233753804363138,12.923631866067,0.665957860122194,0.358855426437903,0,13.1368923941889,0,0,0.643105137237198,0,1.12950368523413,1.84130094602871,2.29158205375759,1.20297227640581,0,1.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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:14238 | |||
|HGNC= | |||
|MCL_coexpression_id=2063 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:O54743 | |||
|association_with_transcript=-88bp_to_ENSMUST00000042054,NM_010225,uc007pzo.2_5end | |||
|cluster_id=chr13:31717548..31717596,+ | |||
|description=CAGE_peak_1_at_Foxf2_5end | |||
|id=chr13:31717548..31717596,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002048!2.38e-10!14;UBERON:0000117!2.38e-10!14;UBERON:0000171!2.38e-10!14;UBERON:0000170!2.38e-10!14;UBERON:0005597!2.38e-10!14;UBERON:0000118!2.38e-10!14;UBERON:0005153!9.73e-08!17;UBERON:0000033!5.63e-07!63;UBERON:0005178!7.26e-07!17;UBERON:0005181!7.26e-07!17;UBERON:0002224!7.26e-07!17;UBERON:0000915!7.26e-07!17;UBERON:0008947!7.26e-07!17;UBERON:0003258!7.26e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002048,3.26e-11,14;UBERON:0000117,3.26e-11,14;UBERON:0000171,3.26e-11,14;UBERON:0000170,3.26e-11,14;UBERON:0005597,3.26e-11,14;UBERON:0000118,3.26e-11,14;UBERON:0005153,1.05e-08,17;UBERON:0005178,6.83e-08,17;UBERON:0005181,6.83e-08,17;UBERON:0002224,6.83e-08,17;UBERON:0000915,6.83e-08,17;UBERON:0008947,6.83e-08,17;UBERON:0003258,6.83e-08,17 | |||
|phase1_expression=86.3202285894839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57181818634493,0,0.261199789138935,0.159992422793407,0,0,0,0,0.190023419456374,1.51218077855958,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,6.16894408080329,7.40051597902456,8.9937908559224,18.7773922643529,0.436050312760893,0,0.777719596297134,2.65974201088189,0,0,0,0,2.31533492432352,0,3.6097046459421,2.22548106945558,4.7609188134483,2.53532561402472,9.14880236586657,5.33576877666684,0.449949858640699,0.988866362566974,0.7104801149461,1.49800055259202,1.92109152660777,3.31806759387129,3.91517221161903,6.52007380189284,5.42736870367227,2.87129103237098,2.08234358665422,4.2172007248024,3.67687514644008,3.30347642998166,4.85211884723713,2.30409799884365,5.67111037239834,3.47653045689157,3.64639359389732,3.35019598801657,3.93933827022176,2.75036845998258,4.71405736757868,3.98640706237488,4.65998614563251,1.4387976733305,1.36028808192214,0,0,0,0.539703191637817,0,0,2.10666630197628,14.4865774191349,8.3131521472918,8.83348936275851,1.83096445709685,5.13305909657271,2.54805239706646,0,0,0,0,1.82694207550496,0.258937883647172,0,0.173485326766136,0,0,0,0,0,2.71914464507811,0.433798070759735,0.884610551949874,0.647067399789637,0,0.484875253135222,5.59175283654366,3.51336956413857,3.97948742945565,11.240110429178,0,0,0,4.04434726393021,3.20250421973039,3.76963056338593,6.08385120672968,4.85859368927628,5.81806524766768,3.24482526135515,1.01839363850316,2.11491850037158,0,1.26265113531884,8.58794923553845,5.51765050640335,6.12211241338187,3.76762044589288,6.93972291343544,7.17436833595159,6.65282244374075,2.84573707812917,1.07783996466421,0.756424320671277,8.09375171154165,10.7405908889512,13.3462679628287,3.83077383174383,3.2925141825271,0.398068533636986,0,0,0,0.828503090142008,1.17263029990548,0,2.84093682702252,0,0,0.232533944750408,0.536546802799238,0,0.16455984991348,0,0.0810688095458557,0,0,0,4.83666881697493,6.79170441703277,0.330418782983798,10.0491215332147,57.8011158950484,44.3572043253438,36.3406240928303,29.445794595008,24.2392067790909,26.2511364035332,19.455691523325,19.7638745668813,25.8875265064278,24.6706025331027,24.7604390641283,13.4822911298133,12.752144942607,13.7407478545513,0.189667900953082,0.114248512609729,0,0,0,0.210407459670956,0,0,0,0,0,1.50160595144485,1.57247196090562,0.449724224769707,0,0,1.52775511068852,0.287696137450811,0,0.274561413188081,0,3.72140947668503,0,0,0,0,23.833161531492,17.2437184711141,35.3633998879196,32.5910564688361,33.3260152569673,30.1511263395268,32.8500224422699,31.8067846008212,66.049125380494,71.9760241358519,84.0326630824957,32.4449363137161,29.5291318990681,30.5209513606989,0,0,0,0,4.97706828962155,3.04750385139728,17.5410391553043,0,0.315508219416257,0.390438744296638,0.215423397732799,0.955875191810208,0,0,0,0.876767573733936,0.790575555893047,4.81981974632711,0,0.35613120733451,0.162886959353576,0.164970122972535,0,0.728341908464944,2.41858845571801,0,1.18120757152309,1.84461088766356,5.42699415653264,0,0,3.79244109522979,1.05418608574999,0,2.04263763452273,29.8901416091975,27.424040961944,18.8616590827801,24.1182717753492,19.4422011186257,15.9612549984057,21.0080814889074,0.23467170806371,1.69465656691056,3.08739757276947,0,1.61464426695906,0.904693873922338,0.477489376012546,0.328281799490123,20.4036585640896,5.00648315428376,0,0.619160603889667,0,0,0,0,0,0,0,20.0480829783174,50.9300949665628,27.6514475292514,28.1893939544901,25.5087721137652,27.076957904526,23.8709893101133,37.8552827222039,19.3699397068182,14.6464919819726,0,0,0,0,0.388902376688095,0,0.168956125490778,0,0.911430693907651,0,0,0,0,0,0.308132871494482,0,0,0.198681354781265,0,0,0.201932899896295,0.15241361331,0,0,0,0.233753804363138,12.923631866067,0.665957860122194,0.358855426437903,0,13.1368923941889,0,0,0.643105137237198,0,1.12950368523413,1.84130094602871,2.29158205375759,1.20297227640581,0,1.5107877947794,0,0.45032120322422,0.453142408984205,0.51776031175182,12.0393323197645,13.5668456956351,10.0732827394939,8.0225216632537,7.75568701723535,9.92754945630076,6.66740183404846,3.91466608753899,5.13470735346904,5.81203587056734,4.05566879824384,4.71565853465191,5.99305647807247,6.4665403928918,6.26046611616185,7.62069906052918,5.33067899346335,5.78727661391115,4.94503080963968,4.85756436443511,5.82877729055206,4.61437096014278,5.24559617884106,3.92435324907287,4.70546902076653,5.753793336634,6.0366231048015,4.20911538300549,4.75314398460516,3.92799590160417,4.74540072496697,4.92522411877817,5.32000356120596,5.57772628269478,6.94463799532109,8.99318080576605,4.67863216890817,5.37177635120746,1.3390183244819,0.882365676478062,0.231867835620421 | |||
|short_description=p1@Foxf2 | |||
}} |
Revision as of 21:36, 5 August 2015
Short description: | p1@Foxf2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Foxf2_5end |
Coexpression cluster: | MCL_coexpression_mm9:2063 |
Association with transcript: | -88bp_to_ENSMUST00000042054, NM_010225, uc007pzo.2_5end |
EntrezGene: | 14238 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung | 3.26e-11 | 14 |
respiratory tube | 3.26e-11 | 14 |
respiration organ | 3.26e-11 | 14 |
pair of lungs | 3.26e-11 | 14 |
lung primordium | 3.26e-11 | 14 |
lung bud | 3.26e-11 | 14 |
epithelial bud | 1.05e-08 | 17 |
thoracic cavity element | 6.83e-08 | 17 |
thoracic segment organ | 6.83e-08 | 17 |
thoracic cavity | 6.83e-08 | 17 |
thoracic segment of trunk | 6.83e-08 | 17 |
respiratory primordium | 6.83e-08 | 17 |
endoderm of foregut | 6.83e-08 | 17 |