FFCP PHASE1:Mm9::chr11:36872786..36872789,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=2|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:36872786..36872789,-|id=chr11:36872786..36872789,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!4.37e-19!63;UBERON:0003056!3.34e-18!49;UBERON:0000955!8.12e-18!50;UBERON:0006238!8.12e-18!50;UBERON:0001049!5.17e-17!52;UBERON:0005068!5.17e-17!52;UBERON:0006241!5.17e-17!52;UBERON:0007135!5.17e-17!52;UBERON:0002616!6.19e-17!49;UBERON:0002346!1.84e-15!71;UBERON:0003075!1.84e-15!71;UBERON:0007284!1.84e-15!71;UBERON:0002791!6.75e-15!29;UBERON:0003528!6.75e-15!29;UBERON:0001893!6.75e-15!29;UBERON:0002020!7.94e-15!34;UBERON:0003080!1.10e-14!40;UBERON:0002780!7.87e-14!39;UBERON:0001890!7.87e-14!39;UBERON:0006240!7.87e-14!39;UBERON:0000956!4.73e-12!21;UBERON:0001869!4.73e-12!21;UBERON:0000203!4.73e-12!21;UBERON:0002021!3.61e-11!10;UBERON:0000411!3.61e-11!10;UBERON:0001950!3.61e-11!10;UBERON:0000153!4.26e-11!94;UBERON:0001017!5.10e-11!73;UBERON:0005743!5.10e-11!73;UBERON:0007811!6.88e-11!86;UBERON:0000073!2.31e-10!75;UBERON:0001016!2.31e-10!75;UBERON:0002619!7.00e-10!17;UBERON:0004121!2.13e-08!102;UBERON:0000924!2.13e-08!102;UBERON:0006601!2.13e-08!102|ontology_enrichment_uberon_v019_2=UBERON:0002021,2.69e-26,10;UBERON:0000411,2.69e-26,10;UBERON:0001950,2.69e-26,10;UBERON:0002619,3.63e-21,17;UBERON:0000956,1.17e-19,21;UBERON:0001869,1.17e-19,21;UBERON:0000203,1.17e-19,21;UBERON:0000955,1.23e-18,47;UBERON:0006238,1.23e-18,47;UBERON:0002616,5.39e-17,46;UBERON:0003080,4.83e-16,40;UBERON:0003528,1.15e-15,29;UBERON:0002791,1.15e-15,29;UBERON:0001893,1.15e-15,29;UBERON:0000073,1.51e-15,54;UBERON:0001049,1.64e-14,52;UBERON:0005068,1.64e-14,52;UBERON:0006241,1.64e-14,52;UBERON:0007135,1.64e-14,52;UBERON:0002780,1.92e-14,39;UBERON:0001890,1.92e-14,39;UBERON:0006240,1.92e-14,39;UBERON:0003056,5.43e-14,49;UBERON:0002020,7.01e-13,34;UBERON:0002346,2.54e-12,64;UBERON:0003075,2.54e-12,64;UBERON:0007284,2.54e-12,64;UBERON:0001017,1.26e-11,73;UBERON:0001016,3.47e-11,75;UBERON:0010371,3.14e-10,73;UBERON:0004121,8.70e-09,95;UBERON:0000924,8.70e-09,95;UBERON:0006601,8.70e-09,95;UBERON:0010314,3.54e-07,92|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404950534779652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207379224616955,0.405017814995072,0.630974884054146,0,0,0.244981598429908,0.0958454710182364,0,2.20231761998777,0.766124028511126,0,0.395658863190582,0.182975287204819,0.52091337055676,0,0.56276261003168,2.13917546887534,0.883885756421003,0.569486723196412,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93950101254089,0,0.585561594023094,0.628340120440365,0,0,0,0,2.99581278809645,0.457500602818626,0.879580464790051,2.9550134432687,2.30143911597297,2.0778804455956,2.10913641988085,0,0,0,0.420883711772948,0.260240885925407,0,0.180062129805349,0.452114453507145,0.680364991513279,0.640568601424249,0.468508622798644,1.81092359517311,0,0.567318240503458,0,0.219195732427575,0.278047249225598,0,0.205782136407943,0,0,0,0,0.414251545071004,0,0,0,0,0,0.232533944750408,0,0,0,0,0,0,0,0,3.36463917702604,2.05809224758569,0,0,0,0.232236671860439,0.257734922644187,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140271639780637,0,0,0,0,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0.169745085775188,0.234690248288502,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60550589987792,1.40654023910644,0,0,0,0,0,0,0,0,0,0,0,3.21321316421807,0,0.178065603667255,0.325773918707152,0,1.32745138339963,0,0.302323556964751,0.188605079755898,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0.177340233642274,0.178368817602071,0,0.304464949114599,0,0,0,0,0,0,0,0,0,0.741701208042039,0,0.619160603889667,0.185194527369712,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0.194451188344048,0.129159823477731,0,0,0,0,0,0.288030006257865,0,0,0.102710957164827,0,0,0,0,0,0,0.15241361331,0,0,0,0,0,0,0,0,0,0,0,0,0,3.95326289831947,5.9842280745933,2.29158205375759,10.4830441229649,2.05524755931193,1.5107877947794,2.70009000092722,6.75481804836331,4.07828168085784,4.14208249401456,0,0.798049746802062,1.19513524027894,0.243106717068294,0,0,0.44449345560323,0.206035057238894,0.64183841918363,0.505394423527595,1.01391719956096,0,1.12369808963859,0.640251524048693,0.746661096422973,0.476293691283074,1.0429589335037,0.77163688185482,1.64834360321323,0.588795680537589,0.685738504770831,0.70990322463735,0.953744759789284,1.16277133305863,0.658765662907314,1.26921911837515,1.28049581010941,1.8414879800649,0.950628796921032,0.561142271657738,0.355905054372522,1.18205378850676,0.409231043169689,0.464810523557898,0.578719832943424,0.499621155875892,0.935726433781634,1.50409737833809,0,0.220591419119515,0|short_description=p@chr11:36872786..36872789,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:36872786..36872789,- | |||
|description=CAGE_peak_at_chr11:36872786..36872789,- | |||
|id=chr11:36872786..36872789,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!4.37e-19!63;UBERON:0003056!3.34e-18!49;UBERON:0000955!8.12e-18!50;UBERON:0006238!8.12e-18!50;UBERON:0001049!5.17e-17!52;UBERON:0005068!5.17e-17!52;UBERON:0006241!5.17e-17!52;UBERON:0007135!5.17e-17!52;UBERON:0002616!6.19e-17!49;UBERON:0002346!1.84e-15!71;UBERON:0003075!1.84e-15!71;UBERON:0007284!1.84e-15!71;UBERON:0002791!6.75e-15!29;UBERON:0003528!6.75e-15!29;UBERON:0001893!6.75e-15!29;UBERON:0002020!7.94e-15!34;UBERON:0003080!1.10e-14!40;UBERON:0002780!7.87e-14!39;UBERON:0001890!7.87e-14!39;UBERON:0006240!7.87e-14!39;UBERON:0000956!4.73e-12!21;UBERON:0001869!4.73e-12!21;UBERON:0000203!4.73e-12!21;UBERON:0002021!3.61e-11!10;UBERON:0000411!3.61e-11!10;UBERON:0001950!3.61e-11!10;UBERON:0000153!4.26e-11!94;UBERON:0001017!5.10e-11!73;UBERON:0005743!5.10e-11!73;UBERON:0007811!6.88e-11!86;UBERON:0000073!2.31e-10!75;UBERON:0001016!2.31e-10!75;UBERON:0002619!7.00e-10!17;UBERON:0004121!2.13e-08!102;UBERON:0000924!2.13e-08!102;UBERON:0006601!2.13e-08!102 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,2.69e-26,10;UBERON:0000411,2.69e-26,10;UBERON:0001950,2.69e-26,10;UBERON:0002619,3.63e-21,17;UBERON:0000956,1.17e-19,21;UBERON:0001869,1.17e-19,21;UBERON:0000203,1.17e-19,21;UBERON:0000955,1.23e-18,47;UBERON:0006238,1.23e-18,47;UBERON:0002616,5.39e-17,46;UBERON:0003080,4.83e-16,40;UBERON:0003528,1.15e-15,29;UBERON:0002791,1.15e-15,29;UBERON:0001893,1.15e-15,29;UBERON:0000073,1.51e-15,54;UBERON:0001049,1.64e-14,52;UBERON:0005068,1.64e-14,52;UBERON:0006241,1.64e-14,52;UBERON:0007135,1.64e-14,52;UBERON:0002780,1.92e-14,39;UBERON:0001890,1.92e-14,39;UBERON:0006240,1.92e-14,39;UBERON:0003056,5.43e-14,49;UBERON:0002020,7.01e-13,34;UBERON:0002346,2.54e-12,64;UBERON:0003075,2.54e-12,64;UBERON:0007284,2.54e-12,64;UBERON:0001017,1.26e-11,73;UBERON:0001016,3.47e-11,75;UBERON:0010371,3.14e-10,73;UBERON:0004121,8.70e-09,95;UBERON:0000924,8.70e-09,95;UBERON:0006601,8.70e-09,95;UBERON:0010314,3.54e-07,92 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404950534779652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207379224616955,0.405017814995072,0.630974884054146,0,0,0.244981598429908,0.0958454710182364,0,2.20231761998777,0.766124028511126,0,0.395658863190582,0.182975287204819,0.52091337055676,0,0.56276261003168,2.13917546887534,0.883885756421003,0.569486723196412,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93950101254089,0,0.585561594023094,0.628340120440365,0,0,0,0,2.99581278809645,0.457500602818626,0.879580464790051,2.9550134432687,2.30143911597297,2.0778804455956,2.10913641988085,0,0,0,0.420883711772948,0.260240885925407,0,0.180062129805349,0.452114453507145,0.680364991513279,0.640568601424249,0.468508622798644,1.81092359517311,0,0.567318240503458,0,0.219195732427575,0.278047249225598,0,0.205782136407943,0,0,0,0,0.414251545071004,0,0,0,0,0,0.232533944750408,0,0,0,0,0,0,0,0,3.36463917702604,2.05809224758569,0,0,0,0.232236671860439,0.257734922644187,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140271639780637,0,0,0,0,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0.169745085775188,0.234690248288502,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60550589987792,1.40654023910644,0,0,0,0,0,0,0,0,0,0,0,3.21321316421807,0,0.178065603667255,0.325773918707152,0,1.32745138339963,0,0.302323556964751,0.188605079755898,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0.177340233642274,0.178368817602071,0,0.304464949114599,0,0,0,0,0,0,0,0,0,0.741701208042039,0,0.619160603889667,0.185194527369712,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0.194451188344048,0.129159823477731,0,0,0,0,0,0.288030006257865,0,0,0.102710957164827,0,0,0,0,0,0,0.15241361331,0,0,0,0,0,0,0,0,0,0,0,0,0,3.95326289831947,5.9842280745933,2.29158205375759,10.4830441229649,2.05524755931193,1.5107877947794,2.70009000092722,6.75481804836331,4.07828168085784,4.14208249401456,0,0.798049746802062,1.19513524027894,0.243106717068294,0,0,0.44449345560323,0.206035057238894,0.64183841918363,0.505394423527595,1.01391719956096,0,1.12369808963859,0.640251524048693,0.746661096422973,0.476293691283074,1.0429589335037,0.77163688185482,1.64834360321323,0.588795680537589,0.685738504770831,0.70990322463735,0.953744759789284,1.16277133305863,0.658765662907314,1.26921911837515,1.28049581010941,1.8414879800649,0.950628796921032,0.561142271657738,0.355905054372522,1.18205378850676,0.409231043169689,0.464810523557898,0.578719832943424,0.499621155875892,0.935726433781634,1.50409737833809,0,0.220591419119515,0 | |||
|short_description=p@chr11:36872786..36872789,- | |||
}} |
Latest revision as of 21:14, 5 August 2015
Short description: | p@chr11:36872786..36872789, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:36872786..36872789, - |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 2.69e-26 | 10 |
visual cortex | 2.69e-26 | 10 |
neocortex | 2.69e-26 | 10 |
regional part of cerebral cortex | 3.63e-21 | 17 |
cerebral cortex | 1.17e-19 | 21 |
cerebral hemisphere | 1.17e-19 | 21 |
pallium | 1.17e-19 | 21 |
brain | 1.23e-18 | 47 |
future brain | 1.23e-18 | 47 |
regional part of brain | 5.39e-17 | 46 |
anterior neural tube | 4.83e-16 | 40 |
brain grey matter | 1.15e-15 | 29 |
regional part of telencephalon | 1.15e-15 | 29 |
telencephalon | 1.15e-15 | 29 |
regional part of nervous system | 1.51e-15 | 54 |
neural tube | 1.64e-14 | 52 |
neural rod | 1.64e-14 | 52 |
future spinal cord | 1.64e-14 | 52 |
neural keel | 1.64e-14 | 52 |
regional part of forebrain | 1.92e-14 | 39 |
forebrain | 1.92e-14 | 39 |
future forebrain | 1.92e-14 | 39 |
pre-chordal neural plate | 5.43e-14 | 49 |
gray matter | 7.01e-13 | 34 |
neurectoderm | 2.54e-12 | 64 |
neural plate | 2.54e-12 | 64 |
presumptive neural plate | 2.54e-12 | 64 |
central nervous system | 1.26e-11 | 73 |
nervous system | 3.47e-11 | 75 |
ecto-epithelium | 3.14e-10 | 73 |
ectoderm-derived structure | 8.70e-09 | 95 |
ectoderm | 8.70e-09 | 95 |
presumptive ectoderm | 8.70e-09 | 95 |
structure with developmental contribution from neural crest | 3.54e-07 | 92 |