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FFCP PHASE1:Mm9::chr18:47528534..47528550,-: Difference between revisions

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{{FFCP|EntrezGene=20358|HGNC=|MCL_coexpression_id=3146|UniProt=|association_with_transcript=-10bp_to_ENSMUST00000151382_5end|description=CAGE_peak_4_at_Sema6a_5end|id=chr18:47528534..47528550,-|ontology_enrichment_celltype=CL:0000540!3.60e-09!33;CL:0000047!3.60e-09!33;CL:0000031!3.60e-09!33;CL:0000404!3.60e-09!33;CL:0000117!3.07e-08!23;CL:0000337!3.07e-08!23;CL:0000221!3.26e-08!44;CL:0000133!3.26e-08!44;CL:0002319!4.45e-08!43|ontology_enrichment_celltype_v019_2=CL:0000540,2.98e-09,33;CL:0000047,2.98e-09,33;CL:0000031,2.98e-09,33;CL:0000404,2.98e-09,33;CL:0000117,2.60e-08,23;CL:0000337,2.60e-08,23;CL:0000221,2.76e-08,44;CL:0000133,2.76e-08,44;CL:0002319,3.79e-08,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000468!4.02e-13!333;UBERON:0004121!6.07e-13!102;UBERON:0000924!6.07e-13!102;UBERON:0006601!6.07e-13!102;UBERON:0001017!4.73e-12!73;UBERON:0005743!4.73e-12!73;UBERON:0000073!1.28e-11!75;UBERON:0001016!1.28e-11!75;UBERON:0000922!2.96e-10!328;UBERON:0000033!2.17e-08!63;UBERON:0002346!2.27e-08!71;UBERON:0003075!2.27e-08!71;UBERON:0007284!2.27e-08!71;UBERON:0001049!1.99e-07!52;UBERON:0005068!1.99e-07!52;UBERON:0006241!1.99e-07!52;UBERON:0007135!1.99e-07!52|ontology_enrichment_uberon_v019_2=UBERON:0004121,3.10e-14,95;UBERON:0000924,3.10e-14,95;UBERON:0006601,3.10e-14,95;UBERON:0001017,5.24e-12,73;UBERON:0001016,1.42e-11,75;UBERON:0010371,7.70e-11,73;UBERON:0002346,9.45e-10,64;UBERON:0003075,9.45e-10,64;UBERON:0007284,9.45e-10,64;UBERON:0000922,3.96e-09,320;UBERON:0000073,3.01e-08,54;UBERON:0001049,2.35e-07,52;UBERON:0005068,2.35e-07,52;UBERON:0006241,2.35e-07,52;UBERON:0007135,2.35e-07,52|phase1_expression=5.76535849577258,3.48975407639361,3.18499467572675,1.81478526784098,0,1.51091344720701,0.700837921786577,0,0,0,0,0,0,0,0,0.607425802169478,0,0,0,0,4.25216450755349,0,0,1.59992422793407,1.37645568640302,1.14846392823004,0.430761996159075,0.861884930743556,0.190023419456374,0.252030129759931,0.221730510655305,0,0,0,0.577703239502549,0,0.204169356262369,0,0,0,0,0,0,2.14024590558481,1.72340783073175,4.77221555620372,1.56478268869608,3.70642765846759,4.83309602015838,4.6663175777828,2.93971485413261,4.31257693094915,0,0,0,0.514518872071894,1.43266719969378,0,16.1853168687678,20.1016572123373,21.5502677192101,0.677689064138264,0,0,0,0,2.69640099466564,7.30014780110954,3.62913643079672,4.45519596494579,3.99617426567626,15.996455126613,20.9825113904033,3.67472397644862,2.20444583341944,6.43453150627015,13.2139057199266,8.81042632787795,7.37311359629969,12.924856197559,9.14876436024097,10.939180781692,6.14202597803038,3.93933827022176,3.81995619442025,17.9723437138937,14.3795397607094,10.4383689662168,1.74170244666323,3.32514864469856,25.7979394944493,3.44169550792555,0,0,2.59910566979068,3.58421509677868,1.40444420131752,0,0,0,5.21120653173718,0,0,0,0.432982082022428,0,0.505524445014783,1.48439043634778,5.69663344023778,1.33597925158342,2.94925055502431,2.43572382649713,1.84492397804847,2.86373017049983,2.4693628498498,2.89033160058254,1.48316980640624,5.35017620603673,0,3.72063754879041,2.42925670306433,1.45462575940567,3.72783522436244,3.22058876712702,7.74952815209784,2.81002760729451,0,0,0,8.23848516726525,1.83000241127451,4.90051973240171,2.9550134432687,3.06858548796397,7.06479351502504,7.94982189032012,3.86989582631202,1.99051152976149,0.252722758433675,2.73574412652416,8.84819012146385,3.67843367093557,8.64298223065676,6.48030716693575,7.27990540919208,9.22418786050918,8.24575176125614,7.50239775143145,5.6047678162539,14.9393803332577,19.7065259063623,11.1789823538063,12.5121262151519,6.268538997399,7.20237477427802,7.36426787228425,0,0.257347907114715,0,2.07125772535502,3.28336483973535,1.62055855314913,1.65721314909647,3.54175617145327,2.00547246753592,1.16266972375204,1.60964040839772,1.86824547787471,2.46839774870221,3.94001913789829,6.08016071593918,4.82459958503597,3.73235195994786,5.90508242545636,4.20579897128254,9.2614151141356,1.98251269790279,2.3800550999719,6.82522401712749,7.66381017139447,6.70110798874885,4.23535401709019,4.89231696458715,3.42406127002606,3.32170343081158,5.59976446061637,4.27269854960458,5.57078121715222,3.8992817423824,5.39291645192533,3.02593269824572,2.38969527905241,4.55202962287396,5.02693455482807,6.76246414038483,5.09128319613286,5.43066964069352,4.1380133735288,5.56481526693464,2.06654207171443,2.19798218977925,2.09775178667061,2.96452627087149,1.16791574001266,0.982794975566015,0.899448449539415,0.811440485554012,1.68824011826692,2.03700681425136,2.87696137450811,2.10775794807546,1.92192989231657,4.31304619582064,2.60498663367952,4.05648975048929,2.02063102357689,2.33216637578486,2.41221760681684,12.3784637411625,3.7898282354097,3.91115943460862,3.90413697282933,5.39787571063555,4.35516269348721,5.95109102215034,10.9274842800367,11.9802709520705,11.5161638617363,11.9591076493115,15.4031515832794,11.7425787668809,8.82359257347221,0,0,0.983528546038072,2.20749397043786,6.42202359951168,10.4318401067061,0,3.28212205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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:20358
|HGNC=
|MCL_coexpression_id=3146
|TSSclassifier=NA
|UniProt=
|association_with_transcript=-10bp_to_ENSMUST00000151382_5end
|cluster_id=chr18:47528534..47528550,-
|description=CAGE_peak_4_at_Sema6a_5end
|id=chr18:47528534..47528550,-
|ontology_enrichment_celltype=CL:0000540!3.60e-09!33;CL:0000047!3.60e-09!33;CL:0000031!3.60e-09!33;CL:0000404!3.60e-09!33;CL:0000117!3.07e-08!23;CL:0000337!3.07e-08!23;CL:0000221!3.26e-08!44;CL:0000133!3.26e-08!44;CL:0002319!4.45e-08!43
|ontology_enrichment_celltype_v019_2=CL:0000540,2.98e-09,33;CL:0000047,2.98e-09,33;CL:0000031,2.98e-09,33;CL:0000404,2.98e-09,33;CL:0000117,2.60e-08,23;CL:0000337,2.60e-08,23;CL:0000221,2.76e-08,44;CL:0000133,2.76e-08,44;CL:0002319,3.79e-08,43
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000468!4.02e-13!333;UBERON:0004121!6.07e-13!102;UBERON:0000924!6.07e-13!102;UBERON:0006601!6.07e-13!102;UBERON:0001017!4.73e-12!73;UBERON:0005743!4.73e-12!73;UBERON:0000073!1.28e-11!75;UBERON:0001016!1.28e-11!75;UBERON:0000922!2.96e-10!328;UBERON:0000033!2.17e-08!63;UBERON:0002346!2.27e-08!71;UBERON:0003075!2.27e-08!71;UBERON:0007284!2.27e-08!71;UBERON:0001049!1.99e-07!52;UBERON:0005068!1.99e-07!52;UBERON:0006241!1.99e-07!52;UBERON:0007135!1.99e-07!52
|ontology_enrichment_uberon_v019_2=UBERON:0004121,3.10e-14,95;UBERON:0000924,3.10e-14,95;UBERON:0006601,3.10e-14,95;UBERON:0001017,5.24e-12,73;UBERON:0001016,1.42e-11,75;UBERON:0010371,7.70e-11,73;UBERON:0002346,9.45e-10,64;UBERON:0003075,9.45e-10,64;UBERON:0007284,9.45e-10,64;UBERON:0000922,3.96e-09,320;UBERON:0000073,3.01e-08,54;UBERON:0001049,2.35e-07,52;UBERON:0005068,2.35e-07,52;UBERON:0006241,2.35e-07,52;UBERON:0007135,2.35e-07,52
|phase1_expression=5.76535849577258,3.48975407639361,3.18499467572675,1.81478526784098,0,1.51091344720701,0.700837921786577,0,0,0,0,0,0,0,0,0.607425802169478,0,0,0,0,4.25216450755349,0,0,1.59992422793407,1.37645568640302,1.14846392823004,0.430761996159075,0.861884930743556,0.190023419456374,0.252030129759931,0.221730510655305,0,0,0,0.577703239502549,0,0.204169356262369,0,0,0,0,0,0,2.14024590558481,1.72340783073175,4.77221555620372,1.56478268869608,3.70642765846759,4.83309602015838,4.6663175777828,2.93971485413261,4.31257693094915,0,0,0,0.514518872071894,1.43266719969378,0,16.1853168687678,20.1016572123373,21.5502677192101,0.677689064138264,0,0,0,0,2.69640099466564,7.30014780110954,3.62913643079672,4.45519596494579,3.99617426567626,15.996455126613,20.9825113904033,3.67472397644862,2.20444583341944,6.43453150627015,13.2139057199266,8.81042632787795,7.37311359629969,12.924856197559,9.14876436024097,10.939180781692,6.14202597803038,3.93933827022176,3.81995619442025,17.9723437138937,14.3795397607094,10.4383689662168,1.74170244666323,3.32514864469856,25.7979394944493,3.44169550792555,0,0,2.59910566979068,3.58421509677868,1.40444420131752,0,0,0,5.21120653173718,0,0,0,0.432982082022428,0,0.505524445014783,1.48439043634778,5.69663344023778,1.33597925158342,2.94925055502431,2.43572382649713,1.84492397804847,2.86373017049983,2.4693628498498,2.89033160058254,1.48316980640624,5.35017620603673,0,3.72063754879041,2.42925670306433,1.45462575940567,3.72783522436244,3.22058876712702,7.74952815209784,2.81002760729451,0,0,0,8.23848516726525,1.83000241127451,4.90051973240171,2.9550134432687,3.06858548796397,7.06479351502504,7.94982189032012,3.86989582631202,1.99051152976149,0.252722758433675,2.73574412652416,8.84819012146385,3.67843367093557,8.64298223065676,6.48030716693575,7.27990540919208,9.22418786050918,8.24575176125614,7.50239775143145,5.6047678162539,14.9393803332577,19.7065259063623,11.1789823538063,12.5121262151519,6.268538997399,7.20237477427802,7.36426787228425,0,0.257347907114715,0,2.07125772535502,3.28336483973535,1.62055855314913,1.65721314909647,3.54175617145327,2.00547246753592,1.16266972375204,1.60964040839772,1.86824547787471,2.46839774870221,3.94001913789829,6.08016071593918,4.82459958503597,3.73235195994786,5.90508242545636,4.20579897128254,9.2614151141356,1.98251269790279,2.3800550999719,6.82522401712749,7.66381017139447,6.70110798874885,4.23535401709019,4.89231696458715,3.42406127002606,3.32170343081158,5.59976446061637,4.27269854960458,5.57078121715222,3.8992817423824,5.39291645192533,3.02593269824572,2.38969527905241,4.55202962287396,5.02693455482807,6.76246414038483,5.09128319613286,5.43066964069352,4.1380133735288,5.56481526693464,2.06654207171443,2.19798218977925,2.09775178667061,2.96452627087149,1.16791574001266,0.982794975566015,0.899448449539415,0.811440485554012,1.68824011826692,2.03700681425136,2.87696137450811,2.10775794807546,1.92192989231657,4.31304619582064,2.60498663367952,4.05648975048929,2.02063102357689,2.33216637578486,2.41221760681684,12.3784637411625,3.7898282354097,3.91115943460862,3.90413697282933,5.39787571063555,4.35516269348721,5.95109102215034,10.9274842800367,11.9802709520705,11.5161638617363,11.9591076493115,15.4031515832794,11.7425787668809,8.82359257347221,0,0,0.983528546038072,2.20749397043786,6.42202359951168,10.4318401067061,0,3.28212205365685,4.10160685241134,4.29482618726302,3.87762115919038,6.69112634267146,4.23317480756549,10.4738316391868,5.66734982344852,3.79932615284705,5.13874111330481,7.39039027770156,5.25178315270594,5.87616492101942,3.09485222771795,3.95928295134085,0,6.31229654002952,1.51161778482376,2.64047111658257,1.77181135728464,3.68922177532713,3.35956781118687,3.63533729477506,3.56497378384721,1.8962205476149,1.05418608574999,0,3.40439605753788,9.90336017172206,4.65691261617916,3.85806663056866,6.0295679438373,4.45922044005176,2.96188237083818,2.74018454203139,6.33613611772018,5.50763384245932,1.32317038832977,8.90385765883992,8.07322133479528,5.60910201831849,4.53614907211919,8.53532678674319,4.37221254944776,6.86073617438886,1.19609616558497,7.42992724667601,4.8150577116125,0.565105371014073,1.0935538217682,0.457556346413045,0.169978429993855,0,0,1.90934123603023,3.00519193902079,5.28630614529807,3.99619761040665,4.59994251231831,3.05707589244649,1.61837215661785,3.2234847732881,0.785267825952089,4.66613903850454,1.24267862617385,0,4.78452947340732,2.15096037594227,1.36115831840833,1.16243841129958,0.844780627453891,2.11243029562357,1.5624526181274,0.419437377702843,0.483168241652012,0,0,4.86540516696394,2.05421914329655,1.68897069871134,0.716106782669926,1.19208812868759,0.841368146639782,0.295379054349154,0.100966449948148,0.304827226619999,0.201652370273681,0.38983152295901,0.0962118416403295,0.116876902181569,2.72076460338254,2.21985953374065,1.43542170575161,3.02192309455341,2.31827512838629,3.00291960721891,3.84618410961257,1.2862102744744,2.00628841614145,13.5540442228096,8.74617949363636,13.7494923225455,6.53042092906013,1.37016503954128,3.0215755895588,2.70009000092722,2.70192721934532,0.906284817968409,4.14208249401456,2.59468368960442,15.5619700626402,7.0000778359195,7.53630822911712,3.5634237646757,3.49302666055027,5.33392146723877,6.59312183164461,8.3438994493872,7.07552192938633,8.36481689637791,7.54505365544305,5.61849044819294,4.86591158277006,5.85841783347255,7.1444053692461,5.56244764535306,7.33055037762079,5.35711671044299,6.47675248591348,10.6289468239479,4.2594193478241,5.24559617884106,6.39524233182245,5.08190654242785,6.09225176820071,5.12198324043763,5.26139422875686,5.43216455383447,12.3451299764702,6.05038592433288,5.81176446015824,6.54769669071503,7.90177890048427,6.94463799532109,7.24450676020043,7.25187986180766,6.66100267549725,4.01705497344571,4.85301122062934,5.10109238364927
|short_description=p4@Sema6a
}}

Revision as of 20:28, 5 August 2015

Short description:p4@Sema6a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Sema6a_5end
Coexpression cluster:MCL_coexpression_mm9:3146
Association with transcript: -10bp_to_ENSMUST00000151382_5end
EntrezGene:20358
Link to Zenbu:ZENBU


View on UCSC genome browser


Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression


Sample

p4@Sema6a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G75.77
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I53.49
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I63.18
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.81
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.70
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.61
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.25
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.60
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.38
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.86
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.14
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.72
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B34.77
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.71
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B84.83
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C34.67
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.94
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.43
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C316.19
Mouse Granule cells, donor2.CNhs12357.11731-123E320.10
Mouse Granule cells, donor3.CNhs12108.11636-122C721.55
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C82.70
Mouse Microglia, donor2.CNhs12634.11736-123E87.30
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.63
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F54.46
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D94.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F116.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D520.98
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.67
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.20
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D66.43
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D313.21
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F38.81
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D77.37
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D412.92
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F49.15
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D810.94
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E46.14
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.82
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D617.97
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F614.38
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E110.44
Mouse Schwann, donor1.CNhs12507.11728-123D91.74
Mouse Schwann, donor2.CNhs12573.11746-123F93.33
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G325.80
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F73.44
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F42.60
Mouse hepatocyte, donor8.CNhs13091.11824-124F63.58
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.40
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G65.21
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.48
accessory axillary lymph node, adult.CNhs10475.1063-29H95.70
adrenal gland, adult.CNhs10508.49-24D71.34
adrenal gland, embryo E14.CNhs11038.406-44C52.95
adrenal gland, embryo E16.CNhs11004.1254-43D62.44
adrenal gland, embryo E17.CNhs11043.1263-45I11.84
adrenal gland, embryo E18.CNhs11026.1262-18F52.86
adrenal gland, neonate N00.CNhs11191.1311-23C12.47
adrenal gland, neonate N25.CNhs11223.1377-27I32.89
amnion, adult pregnant day17.5.CNhs10488.583-22A81.48
aorta, adult.CNhs10498.46-23H15.35
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F53.72
bone (os femoris), neonate N16.CNhs11225.1525-43A62.43
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B23.22
cerebellum, neonate N30.CNhs11135.1395-42I27.75
colon, adult.CNhs10468.36-18H72.81
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A48.24
corpus striatum, adult.CNhs10487.19-21D81.83
corpus striatum, neonate N00.CNhs11226.630-43F14.90
cortex, adult.CNhs10473.12-14D52.96
cortex, neonate N30.CNhs11107.1392-42F23.07
diencephalon, adult.CNhs10482.20-12F27.06
diencephalon, neonate N30.CNhs11201.1388-42B27.95
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.87
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.99
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G42.74
eyeball, embryo E12.CNhs11016.345-16C68.85
eyeball, embryo E14.CNhs10521.399-16E23.68
eyeball, embryo E15.CNhs10593.426-16C98.64
eyeball, embryo E17.CNhs11023.1261-18D46.48
eyeball, neonate N00.CNhs11207.633-15C67.28
eyeball, neonate N01.CNhs11140.1532-43E79.22
eyeball, neonate N02.CNhs11205.1551-44G88.25
eyeball, neonate N16.CNhs11188.777-19A27.50
forelimb, embryo E11.CNhs10596.335-25E25.60
forelimb, embryo E12.CNhs10600.359-14H214.94
forelimb, embryo E13.CNhs10589.384-1E219.71
forelimb, embryo E14.CNhs10577.413-26A811.18
forelimb, embryo E15.CNhs11007.437-20E712.51
forelimb, embryo E17.CNhs10598.1517-43C46.27
forelimb, embryo E18.CNhs11008.1520-43B57.20
gonad, embryo E13.CNhs11044.1564-45I67.36
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E92.07
heart, embryo E12.CNhs11015.353-12F53.28
heart, embryo E13.CNhs11013.376-3I91.62
heart, embryo E14.CNhs10597.403-26D41.66
heart, embryo E15.CNhs11017.431-16C83.54
heart, embryo E16.CNhs11021.457-17C62.01
heart, embryo E17.CNhs11025.479-18E51.16
heart, embryo E18.CNhs11030.1283-20G31.61
heart, neonate N00.CNhs11213.639-21E31.87
heart, neonate N03.CNhs11221.1349-25I22.47
heart, neonate N10.CNhs11118.749-24G13.94
heart, neonate N16.CNhs11209.782-15G16.08
heart, neonate N20.CNhs11127.821-26I64.82
heart, neonate N25.CNhs11196.1351-25D33.73
heart, neonate N30.CNhs11202.1390-42D25.91
hippocampus, adult.CNhs10478.13-16E84.21
hippocampus, neonate N00.CNhs11228.627-43G19.26
intestinal mucosa, adult.CNhs10506.860-29I31.98
intestine, adult.CNhs10496.178-9A32.38
intestine, embryo E12.CNhs11019.1251-16I56.83
intestine, embryo E13.CNhs11010.381-16D57.66
intestine, embryo E15.CNhs10602.976-16D86.70
intestine, embryo E16.CNhs10585.463-22H44.24
intestine, embryo E17.CNhs10582.482-18D34.89
intestine, embryo E18.CNhs10526.1289-20F73.42
intestine, neonate N00.CNhs11126.644-26D13.32
intestine, neonate N01.CNhs11192.1322-23E95.60
intestine, neonate N06.CNhs11102.688-20B84.27
intestine, neonate N07.CNhs11095.720-20F25.57
intestine, neonate N10.CNhs11098.755-23A53.90
intestine, neonate N20.CNhs11187.827-18D15.39
intestine, neonate N25.CNhs11121.1352-25E33.03
intestine, neonate N30.CNhs11131.1384-42G12.39
kidney, embryo E14.CNhs10606.411-4I94.55
kidney, embryo E15.CNhs10997.434-16F85.03
kidney, embryo E16.CNhs10584.464-22A56.76
kidney, embryo E17.CNhs11028.483-18I25.09
kidney, embryo E18.CNhs11001.1288-20C75.43
kidney, neonate N00.CNhs11214.646-21G74.14
kidney, neonate N10.CNhs11206.758-6D55.56
kidney, neonate N20.CNhs11113.832-19I12.07
kidney, neonate N25.CNhs11122.1353-25F32.20
kidney, neonate N30.CNhs11203.1385-42H12.10
liver, adult pregnant day01.CNhs10466.508-5B22.96
liver, embryo E12.CNhs10601.355-15F81.17
liver, embryo E13.CNhs10524.378-3H60.98
liver, embryo E14.CNhs10594.409-16E10.90
liver, embryo E15.CNhs10520.433-16D70.81
liver, embryo E16.CNhs10523.462-17F51.69
liver, embryo E17.CNhs10510.481-18A32.04
liver, embryo E18.CNhs10579.499-43G42.88
liver, neonate N00.CNhs11117.641-24F42.11
liver, neonate N03.CNhs11123.1345-25G21.92
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H22.60
liver, neonate N10.CNhs11115.751-24B94.06
liver, neonate N20.CNhs11220.823-25A32.02
liver, neonate N25.CNhs11198.1368-26H12.33
liver, neonate N30.CNhs11106.1382-42D12.41
lung, adult.CNhs10474.28-22B112.38
lung, embryo E12.CNhs10522.354-16G23.79
lung, embryo E14.CNhs10604.404-26F83.91
lung, embryo E15.CNhs11020.432-17C53.90
lung, embryo E16.CNhs10998.458-17B65.40
lung, embryo E17.CNhs10605.480-44A64.36
lung, embryo E18.CNhs10583.1287-20I65.95
lung, neonate N00.CNhs11224.640-42C610.93
lung, neonate N06.CNhs11212.683-20E511.98
lung, neonate N07.CNhs11111.715-19A311.52
lung, neonate N10.CNhs11219.750-23E611.96
lung, neonate N20.CNhs11109.822-18A415.40
lung, neonate N25.CNhs11119.1359-25C711.74
lung, neonate N30.CNhs11133.1394-42H28.82
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H22.21
medulla oblongata, adult.CNhs10477.17-12C26.42
medulla oblongata, neonate N30.CNhs11200.1396-42A310.43
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.28
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E14.10
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E24.29
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.88
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D76.69
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D84.23
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D910.47
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D45.67
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.80
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D65.14
olfactory brain, adult.CNhs10489.18-22I97.39
ovary, adult.CNhs10507.91-2I75.25
ovary, embryo E18.CNhs11040.505-44H75.88
ovary, neonate N00.CNhs11217.1299-22I43.09
oviduct, adult pregnant day01.CNhs10500.988-6G63.96
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F46.31
pancreas, embryo E15.CNhs11042.1556-45F21.51
pancreas, embryo E16.CNhs11003.460-26E52.64
pancreas, embryo E17.CNhs10599.1558-45G31.77
pancreas, embryo E18.CNhs10580.1535-43I73.69
pancreas, neonate N00.CNhs11105.645-26G93.36
pancreas, neonate N01.CNhs11138.1531-43D73.64
pancreas, neonate N02.CNhs11139.1539-43D83.56
pancreas, neonate N16.CNhs11136.787-43B61.90
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G83.40
pituitary gland, embryo E12.CNhs11018.346-16E69.90
pituitary gland, embryo E13.CNhs11009.370-44C74.66
pituitary gland, embryo E14.CNhs11037.398-44A53.86
pituitary gland, embryo E15.CNhs10592.427-16B96.03
pituitary gland, embryo E16.CNhs11036.449-43F64.46
pituitary gland, embryo E17.CNhs11039.1265-44F52.96
pituitary gland, neonate N00.CNhs11190.1308-22E92.74
placenta, adult pregnant day10.CNhs10472.539-13I76.34
placenta, adult pregnant day17.CNhs10464.577-18G35.51
prostate, adult.CNhs10470.859-1F81.32
skin, adult.CNhs10492.30-1C38.90
skin, neonate N00.CNhs11124.650-25G48.07
skin, neonate N03.CNhs11215.662-22H35.61
skin, neonate N06.CNhs11097.693-20I54.54
skin, neonate N10.CNhs11108.762-6C48.54
small intestine, neonate N16.CNhs11114.790-21I14.37
spinal cord, adult.CNhs10505.24-13C96.86
spleen, adult.CNhs10465.25-2G21.20
spleen, embryo E16.CNhs11035.461-43C17.43
spleen, embryo E18.CNhs11011.1271-21F24.82
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H11.09
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E33.01
stomach, embryo E15.CNhs10603.1252-16G85.29
stomach, embryo E16.CNhs11022.459-17D44.00
stomach, embryo E17.CNhs11006.1035-18D54.60
stomach, embryo E18.CNhs10999.1286-20C63.06
stomach, neonate N03.CNhs11193.1340-24B81.62
stomach, neonate N07.CNhs11210.718-18A93.22
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I14.67
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F54.78
testis, embryo E15.CNhs11034.443-27C52.15
testis, embryo E16.CNhs11033.470-26G51.36
testis, embryo E17.CNhs11029.486-18I51.16
testis, embryo E18.CNhs11027.503-18G50.84
testis, neonate N00.CNhs11189.1300-22B72.11
testis, neonate N07.CNhs11222.726-26I41.56
testis, neonate N10.CNhs11204.763-44D90.42
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I44.87
thymus, embryo E15.CNhs11005.430-45I22.05
thymus, embryo E16.CNhs11002.456-26C51.69
thymus, embryo E17.CNhs10581.478-18C10.72
thymus, embryo E18.CNhs10595.1273-19G41.19
thymus, neonate N02.CNhs11181.1541-43F80.84
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.30
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.39
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B42.72
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.44
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G53.02
urinary bladder, adult.CNhs10481.879-12E42.32
uterus, adult pregnant day19.CNhs10497.590-15F53.00
uterus, adult.CNhs10509.92-27E53.85
vagina, adult.CNhs10502.89-27D51.29
vesicular gland, adult.CNhs10491.51-27F82.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A113.55
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A28.75
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A313.75
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D76.53
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.70
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.14
whole body, embryo E11.CNhs11014.324-5I82.59
whole body, embryo E12.CNhs10587.857-27C915.56
whole body, embryo E13.CNhs10512.372-23H27.00
whole body, embryo E14.5.CNhs10578.420-27D27.54
whole body, embryo E14.CNhs10519.395-14B13.56
whole body, embryo E16.CNhs10514.453-14F23.49
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G55.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G56.59
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G58.34
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G57.08
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G58.36
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G57.55
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G55.62
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.87
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G55.86
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G57.14
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G55.56
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G57.33
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G55.36
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G56.48
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G510.63
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.26
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.25
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G56.40
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G55.08
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G56.09
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G55.12
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G55.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.43
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G512.35
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G56.05
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G55.81
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G56.55
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G57.90
whole body, embryo E17.5.CNhs10513.490-9F96.94
whole body, embryo E17.CNhs10517.475-3I57.24
whole body, embryo E18.CNhs10516.493-3B37.25
whole body, neonate N00.CNhs10525.657-19C26.66
whole body, neonate N01.CNhs10576.659-23C64.02
whole body, neonate N06.CNhs10515.692-21D14.85
whole body, neonate N10.CNhs10518.761-6B45.10





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data


Cell type
Ontology termp-valuen
neuron2.98e-0933
neuronal stem cell2.98e-0933
neuroblast2.98e-0933
electrically signaling cell2.98e-0933
CNS neuron (sensu Vertebrata)2.60e-0823
neuroblast (sensu Vertebrata)2.60e-0823
ectodermal cell2.76e-0844
neurectodermal cell2.76e-0844
neural cell3.79e-0843

Uber anatomy
Ontology termp-valuen
ectoderm-derived structure3.10e-1495
ectoderm3.10e-1495
presumptive ectoderm3.10e-1495
central nervous system5.24e-1273
nervous system1.42e-1175
ecto-epithelium7.70e-1173
neurectoderm9.45e-1064
neural plate9.45e-1064
presumptive neural plate9.45e-1064
embryo3.96e-09320
regional part of nervous system3.01e-0854
neural tube2.35e-0752
neural rod2.35e-0752
future spinal cord2.35e-0752
neural keel2.35e-0752