FFCP PHASE1:Mm9::chr1:57028606..57028625,-: Difference between revisions
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{{FFCP|EntrezGene=212712|HGNC=|MCL_coexpression_id=76|UniProt=Q8VI24|association_with_transcript=76bp_to_ENSMUST00000114415_5end|description=CAGE_peak_4_at_Satb2_5end|id=chr1:57028606..57028625,-|ontology_enrichment_celltype=CL:0002609!4.04e-07!6|ontology_enrichment_celltype_v019_2=CL:0002609,3.06e-11,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000956!6.06e-16!21;UBERON:0001869!6.06e-16!21;UBERON:0000203!6.06e-16!21;UBERON:0003056!1.81e-15!49;UBERON:0002780!1.56e-14!39;UBERON:0001890!1.56e-14!39;UBERON:0006240!1.56e-14!39;UBERON:0002020!3.03e-14!34;UBERON:0003080!7.07e-14!40;UBERON:0002791!1.06e-13!29;UBERON:0003528!1.06e-13!29;UBERON:0001893!1.06e-13!29;UBERON:0002619!3.65e-12!17;UBERON:0001049!1.27e-11!52;UBERON:0005068!1.27e-11!52;UBERON:0006241!1.27e-11!52;UBERON:0007135!1.27e-11!52;UBERON:0002346!8.41e-11!71;UBERON:0003075!8.41e-11!71;UBERON:0007284!8.41e-11!71;UBERON:0002021!1.05e-10!10;UBERON:0000411!1.05e-10!10;UBERON:0001950!1.05e-10!10;UBERON:0002616!1.72e-10!49;UBERON:0000033!3.27e-10!63;UBERON:0000955!4.65e-10!50;UBERON:0006238!4.65e-10!50;UBERON:0001017!4.24e-08!73;UBERON:0005743!4.24e-08!73;UBERON:0000073!5.11e-08!75;UBERON:0001016!5.11e-08!75;UBERON:0004121!3.18e-07!102;UBERON:0000924!3.18e-07!102;UBERON:0006601!3.18e-07!102|ontology_enrichment_uberon_v019_2=UBERON:0000956,1.32e-27,21;UBERON:0001869,1.32e-27,21;UBERON:0000203,1.32e-27,21;UBERON:0002619,5.84e-21,17;UBERON:0003528,1.96e-20,29;UBERON:0002791,1.96e-20,29;UBERON:0001893,1.96e-20,29;UBERON:0002021,1.80e-17,10;UBERON:0000411,1.80e-17,10;UBERON:0001950,1.80e-17,10;UBERON:0002020,1.59e-16,34;UBERON:0002780,1.24e-13,39;UBERON:0001890,1.24e-13,39;UBERON:0006240,1.24e-13,39;UBERON:0003080,3.81e-13,40;UBERON:0002616,1.13e-10,46;UBERON:0000955,2.52e-10,47;UBERON:0006238,2.52e-10,47;UBERON:0003056,1.13e-09,49;UBERON:0001049,8.57e-09,52;UBERON:0005068,8.57e-09,52;UBERON:0006241,8.57e-09,52;UBERON:0007135,8.57e-09,52;UBERON:0000073,2.89e-08,54|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0.380046838912748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.7239249478038,23.7610451463776,20.4015212510841,0.285650984403804,0,5.51208596467293,5.84657373211242,14.7075005857603,0,0.127687338085188,0,0.395658863190582,0.0914876436024097,0.52091337055676,0,0,0,0.589257170947335,0.284743361598206,0.186399445825301,0,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0.340860645156116,0.259786004602869,0,0,0,2.54805239706646,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,1.45590164952668,1.32504911076236,0,1.86391761218122,0,0,0,0,0,0,0,0,2.38743269014442,5.04090528557602,4.09144731728529,0.20778804455956,0.486723789203273,0,0.995255764880744,0,0.210441855886474,0.260240885925407,0.459804208866946,0.180062129805349,0.150704817835715,0.136072998302656,0.12811372028485,0.374806898238915,0,0,0.189106080167819,0,0.219195732427575,0.556094498451196,2.089512999133,0.411564272815887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89260953707715,2.36680608472354,0,0,0,0.464473343720877,0.257734922644187,0.403367049246685,0,0.190225626112559,0,0,0,0,0,0,0.216138049874694,0,0.189667900953082,0,0,0,0,0.140271639780637,0.189709611372772,0.442830443938806,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0.315508219416257,0,0.215423397732799,0,0.891194696329576,0,0,0.292255857911312,0.395287777946524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0.129358683782755,0,0.354680467284547,0.178368817602071,0,0.304464949114599,0.23467170806371,0,0,0,0.322928853391811,0.241251699712623,0.238744688006273,0.164140899745061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0.388844919875379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448569283047378,0,0,0,0,0.214368379079066,0,20.8958181768315,16.5717085142584,18.3326564300607,11.8578695817144,8.22099023724771,7.55393897389701,7.42524750254986,7.20513925158753,4.98456649882625,6.21312374102184,0.103787347584177,0.399024873401031,0,1.70174701947806,1.04806581313991,0.735374033800057,2.00022055021454,3.09052585858341,1.92551525755089,2.02157769411038,2.28131369901216,2.26351609663291,2.24739617927718,1.92075457214608,2.1825478203133,3.33405583898152,1.85414921511769,1.92909220463705,2.47251540481984,2.35518272215036,2.40008476669791,2.8396128985494,2.38436189947321,3.77900683244054,2.4468438907986,2.11536519729191,2.0122077016005,1.8414879800649,2.17286582153379,3.92799590160417,2.13543032623513,1.37906275325789,2.04615521584845,2.01417893541756,1.73615949883027,3.49734809113124,2.57324769289949,1.07435527024149,0.956441660344217,0.441182838239031,0.695603506861264|short_description=p4@Satb2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:212712 | |||
|HGNC= | |||
|MCL_coexpression_id=76 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8VI24 | |||
|association_with_transcript=76bp_to_ENSMUST00000114415_5end | |||
|cluster_id=chr1:57028606..57028625,- | |||
|description=CAGE_peak_4_at_Satb2_5end | |||
|id=chr1:57028606..57028625,- | |||
|ontology_enrichment_celltype=CL:0002609!4.04e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002609,3.06e-11,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000956!6.06e-16!21;UBERON:0001869!6.06e-16!21;UBERON:0000203!6.06e-16!21;UBERON:0003056!1.81e-15!49;UBERON:0002780!1.56e-14!39;UBERON:0001890!1.56e-14!39;UBERON:0006240!1.56e-14!39;UBERON:0002020!3.03e-14!34;UBERON:0003080!7.07e-14!40;UBERON:0002791!1.06e-13!29;UBERON:0003528!1.06e-13!29;UBERON:0001893!1.06e-13!29;UBERON:0002619!3.65e-12!17;UBERON:0001049!1.27e-11!52;UBERON:0005068!1.27e-11!52;UBERON:0006241!1.27e-11!52;UBERON:0007135!1.27e-11!52;UBERON:0002346!8.41e-11!71;UBERON:0003075!8.41e-11!71;UBERON:0007284!8.41e-11!71;UBERON:0002021!1.05e-10!10;UBERON:0000411!1.05e-10!10;UBERON:0001950!1.05e-10!10;UBERON:0002616!1.72e-10!49;UBERON:0000033!3.27e-10!63;UBERON:0000955!4.65e-10!50;UBERON:0006238!4.65e-10!50;UBERON:0001017!4.24e-08!73;UBERON:0005743!4.24e-08!73;UBERON:0000073!5.11e-08!75;UBERON:0001016!5.11e-08!75;UBERON:0004121!3.18e-07!102;UBERON:0000924!3.18e-07!102;UBERON:0006601!3.18e-07!102 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000956,1.32e-27,21;UBERON:0001869,1.32e-27,21;UBERON:0000203,1.32e-27,21;UBERON:0002619,5.84e-21,17;UBERON:0003528,1.96e-20,29;UBERON:0002791,1.96e-20,29;UBERON:0001893,1.96e-20,29;UBERON:0002021,1.80e-17,10;UBERON:0000411,1.80e-17,10;UBERON:0001950,1.80e-17,10;UBERON:0002020,1.59e-16,34;UBERON:0002780,1.24e-13,39;UBERON:0001890,1.24e-13,39;UBERON:0006240,1.24e-13,39;UBERON:0003080,3.81e-13,40;UBERON:0002616,1.13e-10,46;UBERON:0000955,2.52e-10,47;UBERON:0006238,2.52e-10,47;UBERON:0003056,1.13e-09,49;UBERON:0001049,8.57e-09,52;UBERON:0005068,8.57e-09,52;UBERON:0006241,8.57e-09,52;UBERON:0007135,8.57e-09,52;UBERON:0000073,2.89e-08,54 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0.380046838912748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.7239249478038,23.7610451463776,20.4015212510841,0.285650984403804,0,5.51208596467293,5.84657373211242,14.7075005857603,0,0.127687338085188,0,0.395658863190582,0.0914876436024097,0.52091337055676,0,0,0,0.589257170947335,0.284743361598206,0.186399445825301,0,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0.340860645156116,0.259786004602869,0,0,0,2.54805239706646,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,1.45590164952668,1.32504911076236,0,1.86391761218122,0,0,0,0,0,0,0,0,2.38743269014442,5.04090528557602,4.09144731728529,0.20778804455956,0.486723789203273,0,0.995255764880744,0,0.210441855886474,0.260240885925407,0.459804208866946,0.180062129805349,0.150704817835715,0.136072998302656,0.12811372028485,0.374806898238915,0,0,0.189106080167819,0,0.219195732427575,0.556094498451196,2.089512999133,0.411564272815887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89260953707715,2.36680608472354,0,0,0,0.464473343720877,0.257734922644187,0.403367049246685,0,0.190225626112559,0,0,0,0,0,0,0.216138049874694,0,0.189667900953082,0,0,0,0,0.140271639780637,0.189709611372772,0.442830443938806,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0.315508219416257,0,0.215423397732799,0,0.891194696329576,0,0,0.292255857911312,0.395287777946524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0.129358683782755,0,0.354680467284547,0.178368817602071,0,0.304464949114599,0.23467170806371,0,0,0,0.322928853391811,0.241251699712623,0.238744688006273,0.164140899745061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0.388844919875379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448569283047378,0,0,0,0,0.214368379079066,0,20.8958181768315,16.5717085142584,18.3326564300607,11.8578695817144,8.22099023724771,7.55393897389701,7.42524750254986,7.20513925158753,4.98456649882625,6.21312374102184,0.103787347584177,0.399024873401031,0,1.70174701947806,1.04806581313991,0.735374033800057,2.00022055021454,3.09052585858341,1.92551525755089,2.02157769411038,2.28131369901216,2.26351609663291,2.24739617927718,1.92075457214608,2.1825478203133,3.33405583898152,1.85414921511769,1.92909220463705,2.47251540481984,2.35518272215036,2.40008476669791,2.8396128985494,2.38436189947321,3.77900683244054,2.4468438907986,2.11536519729191,2.0122077016005,1.8414879800649,2.17286582153379,3.92799590160417,2.13543032623513,1.37906275325789,2.04615521584845,2.01417893541756,1.73615949883027,3.49734809113124,2.57324769289949,1.07435527024149,0.956441660344217,0.441182838239031,0.695603506861264 | |||
|short_description=p4@Satb2 | |||
}} |
Revision as of 18:54, 5 August 2015
Short description: | p4@Satb2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Satb2_5end |
Coexpression cluster: | MCL_coexpression_mm9:76 |
Association with transcript: | 76bp_to_ENSMUST00000114415_5end |
EntrezGene: | 212712 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of cerebral cortex | 3.06e-11 | 6 |
Ontology term | p-value | n |
---|---|---|
cerebral cortex | 1.32e-27 | 21 |
cerebral hemisphere | 1.32e-27 | 21 |
pallium | 1.32e-27 | 21 |
regional part of cerebral cortex | 5.84e-21 | 17 |
brain grey matter | 1.96e-20 | 29 |
regional part of telencephalon | 1.96e-20 | 29 |
telencephalon | 1.96e-20 | 29 |
occipital lobe | 1.80e-17 | 10 |
visual cortex | 1.80e-17 | 10 |
neocortex | 1.80e-17 | 10 |
gray matter | 1.59e-16 | 34 |
regional part of forebrain | 1.24e-13 | 39 |
forebrain | 1.24e-13 | 39 |
future forebrain | 1.24e-13 | 39 |
anterior neural tube | 3.81e-13 | 40 |
regional part of brain | 1.13e-10 | 46 |
brain | 2.52e-10 | 47 |
future brain | 2.52e-10 | 47 |
pre-chordal neural plate | 1.13e-09 | 49 |
neural tube | 8.57e-09 | 52 |
neural rod | 8.57e-09 | 52 |
future spinal cord | 8.57e-09 | 52 |
neural keel | 8.57e-09 | 52 |
regional part of nervous system | 2.89e-08 | 54 |