FFCP PHASE1:Mm9::chr9:8901535..8901549,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=486|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr9:8901535..8901549,+|id=chr9:8901535..8901549,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000192,1.79e-12,3;CL:0000359,1.79e-12,3;CL:0002539,1.79e-12,3;CL:0000514,1.79e-12,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!2.19e-14!52;UBERON:0005068!2.19e-14!52;UBERON:0006241!2.19e-14!52;UBERON:0007135!2.19e-14!52;UBERON:0000955!4.16e-13!50;UBERON:0006238!4.16e-13!50;UBERON:0002616!1.25e-12!49;UBERON:0001017!4.01e-11!73;UBERON:0005743!4.01e-11!73;UBERON:0003080!6.76e-11!40;UBERON:0003100!1.01e-10!11;UBERON:0000033!1.10e-10!63;UBERON:0002346!1.73e-10!71;UBERON:0003075!1.73e-10!71;UBERON:0007284!1.73e-10!71;UBERON:0000073!1.91e-10!75;UBERON:0001016!1.91e-10!75;UBERON:0002780!3.35e-10!39;UBERON:0001890!3.35e-10!39;UBERON:0006240!3.35e-10!39;UBERON:0000474!1.64e-09!9;UBERON:0003056!2.12e-09!49;UBERON:0002020!3.41e-09!34;UBERON:0002021!6.64e-09!10;UBERON:0000411!6.64e-09!10;UBERON:0001950!6.64e-09!10;UBERON:0003134!1.59e-08!8;UBERON:0007023!6.58e-08!51;UBERON:0002791!1.41e-07!29;UBERON:0003528!1.41e-07!29;UBERON:0001893!1.41e-07!29;UBERON:0004121!3.07e-07!102;UBERON:0000924!3.07e-07!102;UBERON:0006601!3.07e-07!102|ontology_enrichment_uberon_v019_2=UBERON:0000474,6.78e-21,9;UBERON:0003134,2.38e-17,8;UBERON:0003100,6.10e-17,11;UBERON:0000947,9.49e-16,4;UBERON:0001637,9.49e-16,4;UBERON:0004573,9.49e-16,4;UBERON:0003509,9.49e-16,4;UBERON:0004571,9.49e-16,4;UBERON:0010191,9.49e-16,4;UBERON:0004572,9.49e-16,4;UBERON:0003975,2.91e-13,5;UBERON:0000055,1.25e-12,5;UBERON:0007500,1.25e-12,5;UBERON:0001981,1.25e-12,5;UBERON:0002049,1.25e-12,5;UBERON:0007798,1.25e-12,5;UBERON:0004537,1.25e-12,5;UBERON:0006965,1.25e-12,5;UBERON:0001135,1.79e-12,3;UBERON:0004237,1.79e-12,3;UBERON:0004695,1.79e-12,3;UBERON:0002111,1.79e-12,3;UBERON:0004178,1.79e-12,3;UBERON:0007023,2.64e-10,51;UBERON:0005795,1.00e-09,4;UBERON:0000995,1.00e-09,4;UBERON:0004175,2.18e-07,9|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0.418531630736908,0,0,0,0,0,2.51793635951155,1.92616169317078,9.17733760808408,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0.210324961351382,0,0.441737081903227,0,0,0,0,0.893811366596314,0.46081959976873,0.263772575460388,0.0914876436024097,0,0.558365998002762,0,1.06958773443767,0.294628585473668,0.569486723196412,0.745597783301202,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0.304465478312141,0,0,0,0,0,1.59059292611903,0,0,0,0,0,0.292780797011547,0.209446706813455,0,0.11981512450592,0,0,1.19832511523858,4.57500602818627,0.251308704225729,2.25971616249959,0.511430914660661,0.41557608911912,0.973447578406546,0.407357455401265,0,0,0,0,0,0,0,0.204109497453984,0.2562274405697,0,0.517406741478031,0,0.189106080167819,0.175951124163949,0.219195732427575,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.308713837137853,0,0.264450566663544,0.213288250535234,0,0,0,0,0,0,0,0,0,0,1.79763881730844,0.216138049874694,0,0.189667900953082,0,1.1270773567308,0.407302655690628,0,0.280543279561274,0.69560190836683,0,0.156998727841375,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554259570499814,0,0.162964976442026,0.169745085775188,0,0,0,0,0.157635144106191,0,0,0.327726629431476,0.172684981865896,0.144649058581512,0,0,0.491764273019036,0.551873492609465,0.963303539926752,0.703270119553219,0,0,0,0,0.215423397732799,0,0,0,0,0,0,0.321321316421807,2.12910127812403,0.534196811001766,1.30309567482861,8.41347627159931,0,0,0,0,0,0,0,0,0,0,0,0,1.70219802876894,0.18006109403131,0.129358683782755,0.214337035031592,0,0.535106452806212,0.329098041204242,0,3.05073220482823,0.847328283455281,0,0,0,0,0,0,0.291480836629851,1.11255181206306,0,0,0,0,0,0,0.849892149969277,0.419854356970974,0.138199973804424,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0.168956125490778,0.352071715937262,0,0,0,0,0.316011120628178,0,0.102710957164827,0,0,0,0,0,0,0,0.100826185136841,0,0.0962118416403295,0,0,0,0,0,0.19318959403219,7.50729901804728,11.721703953105,7.93163002592544,0.501572104035363,1.12950368523413,0.460325236507177,0.572895513439397,1.89038500578056,2.05524755931193,0.755393897389701,0.675022500231806,0.45032120322422,0.906284817968409,1.03552062350364,0,0.399024873401031,0.341467211508268,0,0,0.183843508450014,0,0.206035057238894,0,0.252697211763798,0.25347929989024,0,0,0.0640251524048693,0.229741875822453,0,0.231768651889711,0,0,0.441596760403192,0,0.177475806159338,0,0,0,0.0846146078916765,0,0,0,0,0.237270036248348,0,0,0,0,0.499621155875892,0,0.214871054048298,0,0.220591419119515,0|short_description=p@chr9:8901535..8901549,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=486 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr9:8901535..8901549,+ | |||
|description=CAGE_peak_at_chr9:8901535..8901549,+ | |||
|id=chr9:8901535..8901549,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,1.79e-12,3;CL:0000359,1.79e-12,3;CL:0002539,1.79e-12,3;CL:0000514,1.79e-12,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.19e-14!52;UBERON:0005068!2.19e-14!52;UBERON:0006241!2.19e-14!52;UBERON:0007135!2.19e-14!52;UBERON:0000955!4.16e-13!50;UBERON:0006238!4.16e-13!50;UBERON:0002616!1.25e-12!49;UBERON:0001017!4.01e-11!73;UBERON:0005743!4.01e-11!73;UBERON:0003080!6.76e-11!40;UBERON:0003100!1.01e-10!11;UBERON:0000033!1.10e-10!63;UBERON:0002346!1.73e-10!71;UBERON:0003075!1.73e-10!71;UBERON:0007284!1.73e-10!71;UBERON:0000073!1.91e-10!75;UBERON:0001016!1.91e-10!75;UBERON:0002780!3.35e-10!39;UBERON:0001890!3.35e-10!39;UBERON:0006240!3.35e-10!39;UBERON:0000474!1.64e-09!9;UBERON:0003056!2.12e-09!49;UBERON:0002020!3.41e-09!34;UBERON:0002021!6.64e-09!10;UBERON:0000411!6.64e-09!10;UBERON:0001950!6.64e-09!10;UBERON:0003134!1.59e-08!8;UBERON:0007023!6.58e-08!51;UBERON:0002791!1.41e-07!29;UBERON:0003528!1.41e-07!29;UBERON:0001893!1.41e-07!29;UBERON:0004121!3.07e-07!102;UBERON:0000924!3.07e-07!102;UBERON:0006601!3.07e-07!102 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000474,6.78e-21,9;UBERON:0003134,2.38e-17,8;UBERON:0003100,6.10e-17,11;UBERON:0000947,9.49e-16,4;UBERON:0001637,9.49e-16,4;UBERON:0004573,9.49e-16,4;UBERON:0003509,9.49e-16,4;UBERON:0004571,9.49e-16,4;UBERON:0010191,9.49e-16,4;UBERON:0004572,9.49e-16,4;UBERON:0003975,2.91e-13,5;UBERON:0000055,1.25e-12,5;UBERON:0007500,1.25e-12,5;UBERON:0001981,1.25e-12,5;UBERON:0002049,1.25e-12,5;UBERON:0007798,1.25e-12,5;UBERON:0004537,1.25e-12,5;UBERON:0006965,1.25e-12,5;UBERON:0001135,1.79e-12,3;UBERON:0004237,1.79e-12,3;UBERON:0004695,1.79e-12,3;UBERON:0002111,1.79e-12,3;UBERON:0004178,1.79e-12,3;UBERON:0007023,2.64e-10,51;UBERON:0005795,1.00e-09,4;UBERON:0000995,1.00e-09,4;UBERON:0004175,2.18e-07,9 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0.418531630736908,0,0,0,0,0,2.51793635951155,1.92616169317078,9.17733760808408,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0.210324961351382,0,0.441737081903227,0,0,0,0,0.893811366596314,0.46081959976873,0.263772575460388,0.0914876436024097,0,0.558365998002762,0,1.06958773443767,0.294628585473668,0.569486723196412,0.745597783301202,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0.304465478312141,0,0,0,0,0,1.59059292611903,0,0,0,0,0,0.292780797011547,0.209446706813455,0,0.11981512450592,0,0,1.19832511523858,4.57500602818627,0.251308704225729,2.25971616249959,0.511430914660661,0.41557608911912,0.973447578406546,0.407357455401265,0,0,0,0,0,0,0,0.204109497453984,0.2562274405697,0,0.517406741478031,0,0.189106080167819,0.175951124163949,0.219195732427575,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.308713837137853,0,0.264450566663544,0.213288250535234,0,0,0,0,0,0,0,0,0,0,1.79763881730844,0.216138049874694,0,0.189667900953082,0,1.1270773567308,0.407302655690628,0,0.280543279561274,0.69560190836683,0,0.156998727841375,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554259570499814,0,0.162964976442026,0.169745085775188,0,0,0,0,0.157635144106191,0,0,0.327726629431476,0.172684981865896,0.144649058581512,0,0,0.491764273019036,0.551873492609465,0.963303539926752,0.703270119553219,0,0,0,0,0.215423397732799,0,0,0,0,0,0,0.321321316421807,2.12910127812403,0.534196811001766,1.30309567482861,8.41347627159931,0,0,0,0,0,0,0,0,0,0,0,0,1.70219802876894,0.18006109403131,0.129358683782755,0.214337035031592,0,0.535106452806212,0.329098041204242,0,3.05073220482823,0.847328283455281,0,0,0,0,0,0,0.291480836629851,1.11255181206306,0,0,0,0,0,0,0.849892149969277,0.419854356970974,0.138199973804424,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0.168956125490778,0.352071715937262,0,0,0,0,0.316011120628178,0,0.102710957164827,0,0,0,0,0,0,0,0.100826185136841,0,0.0962118416403295,0,0,0,0,0,0.19318959403219,7.50729901804728,11.721703953105,7.93163002592544,0.501572104035363,1.12950368523413,0.460325236507177,0.572895513439397,1.89038500578056,2.05524755931193,0.755393897389701,0.675022500231806,0.45032120322422,0.906284817968409,1.03552062350364,0,0.399024873401031,0.341467211508268,0,0,0.183843508450014,0,0.206035057238894,0,0.252697211763798,0.25347929989024,0,0,0.0640251524048693,0.229741875822453,0,0.231768651889711,0,0,0.441596760403192,0,0.177475806159338,0,0,0,0.0846146078916765,0,0,0,0,0.237270036248348,0,0,0,0,0.499621155875892,0,0.214871054048298,0,0.220591419119515,0 | |||
|short_description=p@chr9:8901535..8901549,+ | |||
}} |
Latest revision as of 18:17, 5 August 2015
Short description: | p@chr9:8901535..8901549, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:8901535..8901549, + |
Coexpression cluster: | MCL_coexpression_mm9:486 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 1.79e-12 | 3 |
vascular associated smooth muscle cell | 1.79e-12 | 3 |
aortic smooth muscle cell | 1.79e-12 | 3 |
smooth muscle myoblast | 1.79e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
female reproductive system | 6.78e-21 | 9 |
female reproductive organ | 2.38e-17 | 8 |
female organism | 6.10e-17 | 11 |
aorta | 9.49e-16 | 4 |
artery | 9.49e-16 | 4 |
systemic artery | 9.49e-16 | 4 |
arterial blood vessel | 9.49e-16 | 4 |
systemic arterial system | 9.49e-16 | 4 |
aortic system | 9.49e-16 | 4 |
arterial system | 9.49e-16 | 4 |
internal female genitalia | 2.91e-13 | 5 |
vessel | 1.25e-12 | 5 |
epithelial tube open at both ends | 1.25e-12 | 5 |
blood vessel | 1.25e-12 | 5 |
vasculature | 1.25e-12 | 5 |
vascular system | 1.25e-12 | 5 |
blood vasculature | 1.25e-12 | 5 |
vascular cord | 1.25e-12 | 5 |
smooth muscle tissue | 1.79e-12 | 3 |
blood vessel smooth muscle | 1.79e-12 | 3 |
arterial system smooth muscle | 1.79e-12 | 3 |
artery smooth muscle tissue | 1.79e-12 | 3 |
aorta smooth muscle tissue | 1.79e-12 | 3 |
adult organism | 2.64e-10 | 51 |
embryonic uterus | 1.00e-09 | 4 |
uterus | 1.00e-09 | 4 |
internal genitalia | 2.18e-07 | 9 |