FFCP PHASE1:Mm9::chr4:69904696..69904725,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=214444|HGNC=|MCL_coexpression_id=55|UniProt=|association_with_transcript=160bp_to_ENSMUST00000124251_5end|description=CAGE_peak_5_at_Cdk5rap2_5end|id=chr4:69904696..69904725,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000991!1.30e-24!18;UBERON:0005564!1.30e-24!18;UBERON:0003133!4.24e-23!24;UBERON:0004176!1.56e-22!17;UBERON:0009196!1.56e-22!17;UBERON:0009117!1.56e-22!17;UBERON:0005156!5.01e-21!26;UBERON:0000990!5.01e-21!26;UBERON:0000473!5.82e-20!14;UBERON:0002369!8.58e-19!7;UBERON:0006858!8.58e-19!7;UBERON:0003135!1.81e-18!15;UBERON:0003101!3.66e-17!16;UBERON:0000079!3.66e-17!16;UBERON:0002342!8.63e-13!10;UBERON:0005062!8.63e-13!10;UBERON:0002323!2.69e-10!37;UBERON:0004458!2.69e-10!37;UBERON:0003886!6.08e-10!38;UBERON:0002553!1.32e-09!39;UBERON:0003064!8.65e-09!14|ontology_enrichment_uberon_v019_2=UBERON:0002369,1.35e-37,7;UBERON:0006858,1.35e-37,7;UBERON:0004176,1.59e-28,17;UBERON:0009196,1.59e-28,17;UBERON:0009117,1.59e-28,17;UBERON:0000473,5.26e-28,14;UBERON:0000991,7.12e-27,18;UBERON:0005564,7.12e-27,18;UBERON:0003135,4.49e-26,15;UBERON:0003101,2.20e-24,16;UBERON:0000079,2.20e-24,16;UBERON:0003133,7.46e-20,24;UBERON:0003064,1.65e-18,14;UBERON:0005156,3.13e-18,26;UBERON:0000990,3.13e-18,26;UBERON:0002323,1.98e-12,37;UBERON:0004458,1.98e-12,37;UBERON:0003886,4.55e-12,38;UBERON:0002553,1.00e-11,39;UBERON:0000926,1.48e-10,120;UBERON:0004120,1.48e-10,120;UBERON:0006603,1.48e-10,120|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,14.2504453502232,3.12273588179045,3.65358573974569,5.99600292865752,14.3186508524991,17.9910721917628,12.4409925416379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173824320192276,0,0,0,0,0,0,0,0.130120442962704,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0.995171334092466,0,0,0,0,0.703578179943289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0.189667900953082,0.228497025219458,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.6455063906201,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0.56369293868419,1.34564891439581,2.97825282822776,0.583353565032143,1.80823752868824,1.85851738039856,2.8165737274981,1.17183946359555,1.25831213310853,2.65742532908607,3.16833006883652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0|short_description=p5@Cdk5rap2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:214444 | |||
|HGNC= | |||
|MCL_coexpression_id=55 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=160bp_to_ENSMUST00000124251_5end | |||
|cluster_id=chr4:69904696..69904725,- | |||
|description=CAGE_peak_5_at_Cdk5rap2_5end | |||
|id=chr4:69904696..69904725,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000991!1.30e-24!18;UBERON:0005564!1.30e-24!18;UBERON:0003133!4.24e-23!24;UBERON:0004176!1.56e-22!17;UBERON:0009196!1.56e-22!17;UBERON:0009117!1.56e-22!17;UBERON:0005156!5.01e-21!26;UBERON:0000990!5.01e-21!26;UBERON:0000473!5.82e-20!14;UBERON:0002369!8.58e-19!7;UBERON:0006858!8.58e-19!7;UBERON:0003135!1.81e-18!15;UBERON:0003101!3.66e-17!16;UBERON:0000079!3.66e-17!16;UBERON:0002342!8.63e-13!10;UBERON:0005062!8.63e-13!10;UBERON:0002323!2.69e-10!37;UBERON:0004458!2.69e-10!37;UBERON:0003886!6.08e-10!38;UBERON:0002553!1.32e-09!39;UBERON:0003064!8.65e-09!14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002369,1.35e-37,7;UBERON:0006858,1.35e-37,7;UBERON:0004176,1.59e-28,17;UBERON:0009196,1.59e-28,17;UBERON:0009117,1.59e-28,17;UBERON:0000473,5.26e-28,14;UBERON:0000991,7.12e-27,18;UBERON:0005564,7.12e-27,18;UBERON:0003135,4.49e-26,15;UBERON:0003101,2.20e-24,16;UBERON:0000079,2.20e-24,16;UBERON:0003133,7.46e-20,24;UBERON:0003064,1.65e-18,14;UBERON:0005156,3.13e-18,26;UBERON:0000990,3.13e-18,26;UBERON:0002323,1.98e-12,37;UBERON:0004458,1.98e-12,37;UBERON:0003886,4.55e-12,38;UBERON:0002553,1.00e-11,39;UBERON:0000926,1.48e-10,120;UBERON:0004120,1.48e-10,120;UBERON:0006603,1.48e-10,120 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,14.2504453502232,3.12273588179045,3.65358573974569,5.99600292865752,14.3186508524991,17.9910721917628,12.4409925416379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173824320192276,0,0,0,0,0,0,0,0.130120442962704,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0.995171334092466,0,0,0,0,0.703578179943289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0.189667900953082,0.228497025219458,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.6455063906201,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0.56369293868419,1.34564891439581,2.97825282822776,0.583353565032143,1.80823752868824,1.85851738039856,2.8165737274981,1.17183946359555,1.25831213310853,2.65742532908607,3.16833006883652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |||
|short_description=p5@Cdk5rap2 | |||
}} |
Revision as of 17:13, 5 August 2015
Short description: | p5@Cdk5rap2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Cdk5rap2_5end |
Coexpression cluster: | MCL_coexpression_mm9:55 |
Association with transcript: | 160bp_to_ENSMUST00000124251_5end |
EntrezGene: | 214444 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adrenal gland | 1.35e-37 | 7 |
adrenal/interrenal gland | 1.35e-37 | 7 |
external genitalia | 1.59e-28 | 17 |
indifferent external genitalia | 1.59e-28 | 17 |
indifferent gonad | 1.59e-28 | 17 |
testis | 5.26e-28 | 14 |
gonad | 7.12e-27 | 18 |
gonad primordium | 7.12e-27 | 18 |
male reproductive organ | 4.49e-26 | 15 |
male organism | 2.20e-24 | 16 |
male reproductive system | 2.20e-24 | 16 |
reproductive organ | 7.46e-20 | 24 |
intermediate mesoderm | 1.65e-18 | 14 |
reproductive structure | 3.13e-18 | 26 |
reproductive system | 3.13e-18 | 26 |
body cavity | 1.98e-12 | 37 |
body cavity or lining | 1.98e-12 | 37 |
body cavity precursor | 4.55e-12 | 38 |
anatomical cavity | 1.00e-11 | 39 |
mesoderm | 1.48e-10 | 120 |
mesoderm-derived structure | 1.48e-10 | 120 |
presumptive mesoderm | 1.48e-10 | 120 |