FFCP PHASE1:Mm9::chr9:79641185..79641216,-: Difference between revisions
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{{FFCP|EntrezGene=69981|HGNC=|MCL_coexpression_id=2|UniProt=Q8VEK0|association_with_transcript=20bp_to_ENSMUST00000034878,ENSMUST00000130419,ENSMUST00000153815,NM_133718,uc009quw.2,uc009qux.1_5end|description=CAGE_peak_3_at_Tmem30a_5end|id=chr9:79641185..79641216,-|ontology_enrichment_celltype=CL:0000393!6.58e-11!39;CL:0000211!6.58e-11!39;CL:0000540!1.92e-10!33;CL:0000047!1.92e-10!33;CL:0000031!1.92e-10!33;CL:0000404!1.92e-10!33;CL:0000055!4.92e-09!50;CL:0000117!7.40e-09!23;CL:0000337!7.40e-09!23;CL:0000221!4.58e-08!44;CL:0000133!4.58e-08!44;CL:0002319!5.79e-08!43|ontology_enrichment_celltype_v019_2=CL:0000393,7.83e-11,39;CL:0000211,7.83e-11,39;CL:0000540,2.34e-10,33;CL:0000047,2.34e-10,33;CL:0000031,2.34e-10,33;CL:0000404,2.34e-10,33;CL:0000117,9.50e-09,23;CL:0000337,9.50e-09,23;CL:0000221,5.67e-08,44;CL:0000133,5.67e-08,44;CL:0002319,7.17e-08,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!4.17e-22!102;UBERON:0000924!4.17e-22!102;UBERON:0006601!4.17e-22!102;UBERON:0000073!2.32e-21!75;UBERON:0001016!2.32e-21!75;UBERON:0001017!1.67e-20!73;UBERON:0005743!1.67e-20!73;UBERON:0002346!8.60e-17!71;UBERON:0003075!8.60e-17!71;UBERON:0007284!8.60e-17!71;UBERON:0001049!1.92e-16!52;UBERON:0005068!1.92e-16!52;UBERON:0006241!1.92e-16!52;UBERON:0007135!1.92e-16!52;UBERON:0000025!7.11e-16!114;UBERON:0004111!2.12e-15!122;UBERON:0000955!2.63e-15!50;UBERON:0006238!2.63e-15!50;UBERON:0002616!9.90e-15!49;UBERON:0002020!2.26e-14!34;UBERON:0000033!2.43e-14!63;UBERON:0003080!1.03e-12!40;UBERON:0002780!3.43e-12!39;UBERON:0001890!3.43e-12!39;UBERON:0006240!3.43e-12!39;UBERON:0003056!5.49e-12!49;UBERON:0002791!1.20e-11!29;UBERON:0003528!1.20e-11!29;UBERON:0001893!1.20e-11!29;UBERON:0002021!3.59e-08!10;UBERON:0000411!3.59e-08!10;UBERON:0001950!3.59e-08!10;UBERON:0000956!4.89e-08!21;UBERON:0001869!4.89e-08!21;UBERON:0000203!4.89e-08!21;UBERON:0000477!4.37e-07!154;UBERON:0002619!5.18e-07!17;UBERON:0000483!6.10e-07!181|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.58e-21,95;UBERON:0000924,1.58e-21,95;UBERON:0006601,1.58e-21,95;UBERON:0001016,2.79e-21,75;UBERON:0001017,2.02e-20,73;UBERON:0000073,2.20e-17,54;UBERON:0010371,3.69e-17,73;UBERON:0002346,1.98e-16,64;UBERON:0003075,1.98e-16,64;UBERON:0007284,1.98e-16,64;UBERON:0001049,2.52e-16,52;UBERON:0005068,2.52e-16,52;UBERON:0006241,2.52e-16,52;UBERON:0007135,2.52e-16,52;UBERON:0000025,9.72e-16,114;UBERON:0004111,2.87e-15,122;UBERON:0002020,2.75e-14,34;UBERON:0010314,6.35e-14,92;UBERON:0000955,1.37e-13,47;UBERON:0006238,1.37e-13,47;UBERON:0002616,5.00e-13,46;UBERON:0003080,1.31e-12,40;UBERON:0002780,4.37e-12,39;UBERON:0001890,4.37e-12,39;UBERON:0006240,4.37e-12,39;UBERON:0003056,5.59e-12,49;UBERON:0003528,1.50e-11,29;UBERON:0002791,1.50e-11,29;UBERON:0001893,1.50e-11,29;UBERON:0002021,3.21e-08,10;UBERON:0000411,3.21e-08,10;UBERON:0001950,3.21e-08,10;UBERON:0000956,6.34e-08,21;UBERON:0001869,6.34e-08,21;UBERON:0000203,6.34e-08,21;UBERON:0002619,6.87e-07,17|phase1_expression=3.36312578920067,0.348975407639361,0.909998478779072,0.90739263392049,0.500895729946347,0.839396359559449,0.467225281191051,1.03298658753261,2.53419699873,2.57470978954193,1.54096171402954,1.35612670292072,1.71200729931206,0.611942816932982,1.66554880907831,0.809901069559304,0,0.473193248037357,0.548457734422955,0.84877930359606,8.41928572495591,1.78723712161594,0.783599367416806,0.799962113967033,1.37645568640302,1.14846392823004,0,0.646413698057667,0.760093677825496,0.504060259519861,0.443461021310609,1.27006134691926,0.61506478758457,0,0.577703239502549,0.166234645358492,0.408338712524738,1.25559489221072,2.3440060335714,3.14114246384279,0,2.73218193983378,0.485510353031154,2.51793635951155,4.25783111121961,4.40512205188036,1.56478268869608,0.65407546914134,1.75748946187577,1.94429899074283,1.39986421625363,1.43752564364972,0.335565212115473,2.90144856804538,0.336093799142464,2.82985379639542,3.72493471920384,1.54701627683233,4.85559506063035,6.34789175126439,6.33831403506179,0.677689064138264,1.77858959222228,0.899899717281399,0.988866362566974,0.7104801149461,1.79760066311043,1.92109152660777,3.31806759387129,3.10513658162888,3.36519938162211,6.85562362569129,9.49734726091938,5.02212276781312,2.30029130443767,0.919218786610021,5.50579404996943,10.9811110753261,13.0565553267807,3.95658863190582,3.7509933876988,7.29278718779464,10.0505879640497,5.6276261003168,10.6958773443767,16.2045722010517,10.9626194215309,9.69277118291563,6.81535739998656,3.6274348851257,1.15945795480671,7.74381489283248,3.39985666853875,3.2382191498269,5.84798775702902,4.92829575807069,3.37066608316204,1.1930122580464,2.59786004602869,3.18005617059306,2.95771181531029,2.56652954828636,0,0,1.29894624606728,1.52015919285059,0.505524445014783,3.53970027129086,2.07150306917737,3.26572705942614,1.90833859442749,3.04465478312141,4.15107895060905,1.80867168663147,3.76283862834255,2.01066546127481,5.93267922562497,1.87979163995885,1.76922110389975,2.42650274921114,0.441683036920787,1.454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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:69981 | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8VEK0 | |||
|association_with_transcript=20bp_to_ENSMUST00000034878,ENSMUST00000130419,ENSMUST00000153815,NM_133718,uc009quw.2,uc009qux.1_5end | |||
|cluster_id=chr9:79641185..79641216,- | |||
|description=CAGE_peak_3_at_Tmem30a_5end | |||
|id=chr9:79641185..79641216,- | |||
|ontology_enrichment_celltype=CL:0000393!6.58e-11!39;CL:0000211!6.58e-11!39;CL:0000540!1.92e-10!33;CL:0000047!1.92e-10!33;CL:0000031!1.92e-10!33;CL:0000404!1.92e-10!33;CL:0000055!4.92e-09!50;CL:0000117!7.40e-09!23;CL:0000337!7.40e-09!23;CL:0000221!4.58e-08!44;CL:0000133!4.58e-08!44;CL:0002319!5.79e-08!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,7.83e-11,39;CL:0000211,7.83e-11,39;CL:0000540,2.34e-10,33;CL:0000047,2.34e-10,33;CL:0000031,2.34e-10,33;CL:0000404,2.34e-10,33;CL:0000117,9.50e-09,23;CL:0000337,9.50e-09,23;CL:0000221,5.67e-08,44;CL:0000133,5.67e-08,44;CL:0002319,7.17e-08,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!4.17e-22!102;UBERON:0000924!4.17e-22!102;UBERON:0006601!4.17e-22!102;UBERON:0000073!2.32e-21!75;UBERON:0001016!2.32e-21!75;UBERON:0001017!1.67e-20!73;UBERON:0005743!1.67e-20!73;UBERON:0002346!8.60e-17!71;UBERON:0003075!8.60e-17!71;UBERON:0007284!8.60e-17!71;UBERON:0001049!1.92e-16!52;UBERON:0005068!1.92e-16!52;UBERON:0006241!1.92e-16!52;UBERON:0007135!1.92e-16!52;UBERON:0000025!7.11e-16!114;UBERON:0004111!2.12e-15!122;UBERON:0000955!2.63e-15!50;UBERON:0006238!2.63e-15!50;UBERON:0002616!9.90e-15!49;UBERON:0002020!2.26e-14!34;UBERON:0000033!2.43e-14!63;UBERON:0003080!1.03e-12!40;UBERON:0002780!3.43e-12!39;UBERON:0001890!3.43e-12!39;UBERON:0006240!3.43e-12!39;UBERON:0003056!5.49e-12!49;UBERON:0002791!1.20e-11!29;UBERON:0003528!1.20e-11!29;UBERON:0001893!1.20e-11!29;UBERON:0002021!3.59e-08!10;UBERON:0000411!3.59e-08!10;UBERON:0001950!3.59e-08!10;UBERON:0000956!4.89e-08!21;UBERON:0001869!4.89e-08!21;UBERON:0000203!4.89e-08!21;UBERON:0000477!4.37e-07!154;UBERON:0002619!5.18e-07!17;UBERON:0000483!6.10e-07!181 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.58e-21,95;UBERON:0000924,1.58e-21,95;UBERON:0006601,1.58e-21,95;UBERON:0001016,2.79e-21,75;UBERON:0001017,2.02e-20,73;UBERON:0000073,2.20e-17,54;UBERON:0010371,3.69e-17,73;UBERON:0002346,1.98e-16,64;UBERON:0003075,1.98e-16,64;UBERON:0007284,1.98e-16,64;UBERON:0001049,2.52e-16,52;UBERON:0005068,2.52e-16,52;UBERON:0006241,2.52e-16,52;UBERON:0007135,2.52e-16,52;UBERON:0000025,9.72e-16,114;UBERON:0004111,2.87e-15,122;UBERON:0002020,2.75e-14,34;UBERON:0010314,6.35e-14,92;UBERON:0000955,1.37e-13,47;UBERON:0006238,1.37e-13,47;UBERON:0002616,5.00e-13,46;UBERON:0003080,1.31e-12,40;UBERON:0002780,4.37e-12,39;UBERON:0001890,4.37e-12,39;UBERON:0006240,4.37e-12,39;UBERON:0003056,5.59e-12,49;UBERON:0003528,1.50e-11,29;UBERON:0002791,1.50e-11,29;UBERON:0001893,1.50e-11,29;UBERON:0002021,3.21e-08,10;UBERON:0000411,3.21e-08,10;UBERON:0001950,3.21e-08,10;UBERON:0000956,6.34e-08,21;UBERON:0001869,6.34e-08,21;UBERON:0000203,6.34e-08,21;UBERON:0002619,6.87e-07,17 | |||
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| |||
|short_description=p3@Tmem30a | |||
}} |
Revision as of 17:03, 5 August 2015
Short description: | p3@Tmem30a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Tmem30a_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 20bp_to_ENSMUST00000034878, ENSMUST00000130419, ENSMUST00000153815, NM_133718, uc009quw.2, uc009qux.1_5end |
EntrezGene: | 69981 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 7.83e-11 | 39 |
electrically active cell | 7.83e-11 | 39 |
neuron | 2.34e-10 | 33 |
neuronal stem cell | 2.34e-10 | 33 |
neuroblast | 2.34e-10 | 33 |
electrically signaling cell | 2.34e-10 | 33 |
CNS neuron (sensu Vertebrata) | 9.50e-09 | 23 |
neuroblast (sensu Vertebrata) | 9.50e-09 | 23 |
ectodermal cell | 5.67e-08 | 44 |
neurectodermal cell | 5.67e-08 | 44 |
neural cell | 7.17e-08 | 43 |