FFCP PHASE1:Mm9::chr6:40685369..40685372,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=828|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:40685369..40685372,+|id=chr6:40685369..40685372,+|ontology_enrichment_celltype=CL:0002563!1.03e-11!9;CL:0002251!1.03e-11!9;CL:0000239!5.94e-09!6;CL:0000677!5.94e-09!6;CL:0000212!5.94e-09!6;CL:0000584!5.94e-09!6;CL:0000066!2.87e-08!25;CL:0000075!1.63e-07!7|ontology_enrichment_celltype_v019_2=CL:0000239,5.71e-19,6;CL:0000677,5.71e-19,6;CL:0000584,5.71e-19,6;CL:0000075,3.38e-16,7;CL:0002563,1.70e-12,9;CL:0002251,1.70e-12,9;CL:0000066,2.85e-09,25;CL:0002076,2.69e-07,15;CL:0000223,3.21e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!7.02e-26!43;UBERON:0000344!7.75e-20!15;UBERON:0005409!1.28e-17!59;UBERON:0001242!3.68e-17!13;UBERON:0000060!3.68e-17!13;UBERON:0001262!3.68e-17!13;UBERON:0004786!3.68e-17!13;UBERON:0003350!1.03e-11!9;UBERON:0004808!1.03e-11!9;UBERON:0001277!1.03e-11!9;UBERON:0004923!1.05e-10!24;UBERON:0001007!2.59e-09!128;UBERON:0001555!2.59e-09!128;UBERON:0007026!2.59e-09!128;UBERON:0000485!3.43e-09!11;UBERON:0004119!5.36e-09!130;UBERON:0000925!5.36e-09!130;UBERON:0006595!5.36e-09!130;UBERON:0004921!4.43e-08!126;UBERON:0004185!4.43e-08!126|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.02e-37,31;UBERON:0000344,2.18e-25,15;UBERON:0005409,2.38e-23,47;UBERON:0001242,1.09e-19,13;UBERON:0001262,1.09e-19,13;UBERON:0004786,1.09e-19,13;UBERON:0004923,3.83e-15,24;UBERON:0003350,1.70e-12,9;UBERON:0004808,1.70e-12,9;UBERON:0001277,1.70e-12,9;UBERON:0001007,5.57e-12,116;UBERON:0001555,5.57e-12,116;UBERON:0007026,5.57e-12,116;UBERON:0004119,1.05e-11,118;UBERON:0000925,1.05e-11,118;UBERON:0006595,1.05e-11,118;UBERON:0000485,3.91e-10,11;UBERON:0004921,9.64e-10,114;UBERON:0002108,8.89e-09,4;UBERON:0001155,5.10e-08,2;UBERON:0000059,5.10e-08,2;UBERON:0001962,8.88e-08,2;UBERON:0001961,8.88e-08,2;UBERON:0001744,8.88e-08,2|phase1_expression=0,1.04692622291808,1.36499771816861,1.51232105653415,2.00358291978539,1.00727563147134,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,1.43993180514066,3.44113921600755,1.72269589234506,0.86152399231815,1.72376986148711,6.84084310042946,2.01624103807945,0.886922042621219,0,0,0,0.288851619751275,0.166234645358492,0.612508068787107,0,0,0.523523743973798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.539703191637817,1.94932925234301,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,1.1418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,5.8755122697976,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0.130120442962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398068533636986,0,0,0.284163499395593,0,0,0,0,0,0,0.232533944750408,0,0,0,0,0,0,0,0,0,0,7.59963200862735,3.96675849995316,0,0,0.257734922644187,0.201683524623343,1.11189021922435,0.380451252225118,8.54152310780121,1.81168850196412,0.502670417600539,0.198956472041151,0.58489226135736,8.98819408654222,7.99710784536369,6.77080329064848,0,0,0,0,0,0,0.0632365371242573,0.295220295959204,0.156998727841375,0.246794327843601,0.296452627087149,0,0,0,0,0,0,0,0,0,10.0637744569148,0,0.312037673114561,0.505157755894224,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.12109756922687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.777689839750757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0.320919209591815,0,0,0,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0,0.192909220463705,0,0,0,0,0,0,0,0.0846146078916765,0,0,0.135804113845862,0.561142271657738,0.118635018124174,0.0985044823755635,0,0,0,0,0,0,0,0,0|short_description=p@chr6:40685369..40685372,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=828 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr6:40685369..40685372,+ | |||
|description=CAGE_peak_at_chr6:40685369..40685372,+ | |||
|id=chr6:40685369..40685372,+ | |||
|ontology_enrichment_celltype=CL:0002563!1.03e-11!9;CL:0002251!1.03e-11!9;CL:0000239!5.94e-09!6;CL:0000677!5.94e-09!6;CL:0000212!5.94e-09!6;CL:0000584!5.94e-09!6;CL:0000066!2.87e-08!25;CL:0000075!1.63e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,5.71e-19,6;CL:0000677,5.71e-19,6;CL:0000584,5.71e-19,6;CL:0000075,3.38e-16,7;CL:0002563,1.70e-12,9;CL:0002251,1.70e-12,9;CL:0000066,2.85e-09,25;CL:0002076,2.69e-07,15;CL:0000223,3.21e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!7.02e-26!43;UBERON:0000344!7.75e-20!15;UBERON:0005409!1.28e-17!59;UBERON:0001242!3.68e-17!13;UBERON:0000060!3.68e-17!13;UBERON:0001262!3.68e-17!13;UBERON:0004786!3.68e-17!13;UBERON:0003350!1.03e-11!9;UBERON:0004808!1.03e-11!9;UBERON:0001277!1.03e-11!9;UBERON:0004923!1.05e-10!24;UBERON:0001007!2.59e-09!128;UBERON:0001555!2.59e-09!128;UBERON:0007026!2.59e-09!128;UBERON:0000485!3.43e-09!11;UBERON:0004119!5.36e-09!130;UBERON:0000925!5.36e-09!130;UBERON:0006595!5.36e-09!130;UBERON:0004921!4.43e-08!126;UBERON:0004185!4.43e-08!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.02e-37,31;UBERON:0000344,2.18e-25,15;UBERON:0005409,2.38e-23,47;UBERON:0001242,1.09e-19,13;UBERON:0001262,1.09e-19,13;UBERON:0004786,1.09e-19,13;UBERON:0004923,3.83e-15,24;UBERON:0003350,1.70e-12,9;UBERON:0004808,1.70e-12,9;UBERON:0001277,1.70e-12,9;UBERON:0001007,5.57e-12,116;UBERON:0001555,5.57e-12,116;UBERON:0007026,5.57e-12,116;UBERON:0004119,1.05e-11,118;UBERON:0000925,1.05e-11,118;UBERON:0006595,1.05e-11,118;UBERON:0000485,3.91e-10,11;UBERON:0004921,9.64e-10,114;UBERON:0002108,8.89e-09,4;UBERON:0001155,5.10e-08,2;UBERON:0000059,5.10e-08,2;UBERON:0001962,8.88e-08,2;UBERON:0001961,8.88e-08,2;UBERON:0001744,8.88e-08,2 | |||
|phase1_expression=0,1.04692622291808,1.36499771816861,1.51232105653415,2.00358291978539,1.00727563147134,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,1.43993180514066,3.44113921600755,1.72269589234506,0.86152399231815,1.72376986148711,6.84084310042946,2.01624103807945,0.886922042621219,0,0,0,0.288851619751275,0.166234645358492,0.612508068787107,0,0,0.523523743973798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.539703191637817,1.94932925234301,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,1.1418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,5.8755122697976,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0.130120442962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398068533636986,0,0,0.284163499395593,0,0,0,0,0,0,0.232533944750408,0,0,0,0,0,0,0,0,0,0,7.59963200862735,3.96675849995316,0,0,0.257734922644187,0.201683524623343,1.11189021922435,0.380451252225118,8.54152310780121,1.81168850196412,0.502670417600539,0.198956472041151,0.58489226135736,8.98819408654222,7.99710784536369,6.77080329064848,0,0,0,0,0,0,0.0632365371242573,0.295220295959204,0.156998727841375,0.246794327843601,0.296452627087149,0,0,0,0,0,0,0,0,0,10.0637744569148,0,0.312037673114561,0.505157755894224,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.12109756922687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.777689839750757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0.320919209591815,0,0,0,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0,0.192909220463705,0,0,0,0,0,0,0,0.0846146078916765,0,0,0.135804113845862,0.561142271657738,0.118635018124174,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr6:40685369..40685372,+ | |||
}} |
Latest revision as of 16:55, 5 August 2015
Short description: | p@chr6:40685369..40685372, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:40685369..40685372, + |
Coexpression cluster: | MCL_coexpression_mm9:828 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 5.71e-19 | 6 |
gut absorptive cell | 5.71e-19 | 6 |
enterocyte | 5.71e-19 | 6 |
columnar/cuboidal epithelial cell | 3.38e-16 | 7 |
intestinal epithelial cell | 1.70e-12 | 9 |
epithelial cell of alimentary canal | 1.70e-12 | 9 |
epithelial cell | 2.85e-09 | 25 |
endo-epithelial cell | 2.69e-07 | 15 |
endodermal cell | 3.21e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
intestine | 3.02e-37 | 31 |
mucosa | 2.18e-25 | 15 |
gastrointestinal system | 2.38e-23 | 47 |
intestinal mucosa | 1.09e-19 | 13 |
wall of intestine | 1.09e-19 | 13 |
gastrointestinal system mucosa | 1.09e-19 | 13 |
organ component layer | 3.83e-15 | 24 |
epithelium of mucosa | 1.70e-12 | 9 |
gastrointestinal system epithelium | 1.70e-12 | 9 |
intestinal epithelium | 1.70e-12 | 9 |
digestive system | 5.57e-12 | 116 |
digestive tract | 5.57e-12 | 116 |
primitive gut | 5.57e-12 | 116 |
endoderm-derived structure | 1.05e-11 | 118 |
endoderm | 1.05e-11 | 118 |
presumptive endoderm | 1.05e-11 | 118 |
simple columnar epithelium | 3.91e-10 | 11 |
subdivision of digestive tract | 9.64e-10 | 114 |
small intestine | 8.89e-09 | 4 |
colon | 5.10e-08 | 2 |
large intestine | 5.10e-08 | 2 |
gut-associated lymphoid tissue | 8.88e-08 | 2 |
mucosa-associated lymphoid tissue | 8.88e-08 | 2 |
lymphoid tissue | 8.88e-08 | 2 |