FFCP PHASE1:Mm9::chr15:81575487..81575561,+: Difference between revisions
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{{FFCP|EntrezGene=20286|HGNC=|MCL_coexpression_id=620|UniProt=F8VPP8,Q3UGE6|association_with_transcript=209bp_to_ENSMUST00000109554,NM_001081016,uc007wxd.1,uc007wxe.1_5end|description=CAGE_peak_1_at_Zc3h7b_5end|id=chr15:81575487..81575561,+|ontology_enrichment_celltype=CL:0000221!1.90e-20!44;CL:0000133!1.90e-20!44;CL:0002319!3.39e-20!43;CL:0000055!1.40e-18!50;CL:0000540!2.39e-17!33;CL:0000047!2.39e-17!33;CL:0000031!2.39e-17!33;CL:0000404!2.39e-17!33;CL:0000393!1.42e-16!39;CL:0000211!1.42e-16!39;CL:0000117!1.16e-14!23;CL:0000337!1.16e-14!23;CL:0002321!9.71e-08!70;CL:0000220!9.71e-08!70|ontology_enrichment_celltype_v019_2=CL:0000221,1.90e-20,44;CL:0000133,1.90e-20,44;CL:0002319,3.39e-20,43;CL:0000540,2.39e-17,33;CL:0000047,2.39e-17,33;CL:0000031,2.39e-17,33;CL:0000404,2.39e-17,33;CL:0000393,1.42e-16,39;CL:0000211,1.42e-16,39;CL:0000117,1.16e-14,23;CL:0000337,1.16e-14,23;CL:0002321,9.52e-08,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.56e-35!73;UBERON:0005743!1.56e-35!73;UBERON:0000073!1.36e-34!75;UBERON:0001016!1.36e-34!75;UBERON:0004121!1.50e-28!102;UBERON:0000924!1.50e-28!102;UBERON:0006601!1.50e-28!102;UBERON:0001049!2.85e-25!52;UBERON:0005068!2.85e-25!52;UBERON:0006241!2.85e-25!52;UBERON:0007135!2.85e-25!52;UBERON:0002346!8.47e-25!71;UBERON:0003075!8.47e-25!71;UBERON:0007284!8.47e-25!71;UBERON:0000955!6.52e-24!50;UBERON:0006238!6.52e-24!50;UBERON:0002616!1.87e-23!49;UBERON:0000033!2.37e-23!63;UBERON:0002020!1.14e-20!34;UBERON:0003056!3.02e-19!49;UBERON:0003080!3.20e-19!40;UBERON:0002780!9.39e-19!39;UBERON:0001890!9.39e-19!39;UBERON:0006240!9.39e-19!39;UBERON:0002791!1.91e-17!29;UBERON:0003528!1.91e-17!29;UBERON:0001893!1.91e-17!29;UBERON:0000153!1.33e-13!94;UBERON:0000956!4.08e-13!21;UBERON:0001869!4.08e-13!21;UBERON:0000203!4.08e-13!21;UBERON:0007811!4.40e-13!86;UBERON:0000025!6.91e-13!114;UBERON:0004111!7.13e-12!122;UBERON:0002619!1.01e-10!17;UBERON:0002021!2.64e-07!10;UBERON:0000411!2.64e-07!10;UBERON:0001950!2.64e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.56e-35,73;UBERON:0001016,1.36e-34,75;UBERON:0004121,1.18e-29,95;UBERON:0000924,1.18e-29,95;UBERON:0006601,1.18e-29,95;UBERON:0000073,7.01e-27,54;UBERON:0002346,1.46e-26,64;UBERON:0003075,1.46e-26,64;UBERON:0007284,1.46e-26,64;UBERON:0001049,2.85e-25,52;UBERON:0005068,2.85e-25,52;UBERON:0006241,2.85e-25,52;UBERON:0007135,2.85e-25,52;UBERON:0010314,2.00e-24,92;UBERON:0010371,1.91e-23,73;UBERON:0000955,3.74e-22,47;UBERON:0006238,3.74e-22,47;UBERON:0002616,1.05e-21,46;UBERON:0002020,1.14e-20,34;UBERON:0003056,3.02e-19,49;UBERON:0003080,3.20e-19,40;UBERON:0002780,9.39e-19,39;UBERON:0001890,9.39e-19,39;UBERON:0006240,9.39e-19,39;UBERON:0003528,1.91e-17,29;UBERON:0002791,1.91e-17,29;UBERON:0001893,1.91e-17,29;UBERON:0000956,4.08e-13,21;UBERON:0001869,4.08e-13,21;UBERON:0000203,4.08e-13,21;UBERON:0000025,6.90e-13,114;UBERON:0004111,7.13e-12,122;UBERON:0002619,1.01e-10,17;UBERON:0002021,2.63e-07,10;UBERON:0000411,2.63e-07,10;UBERON:0001950,2.63e-07,10|phase1_expression=32.9906625035876,0.348975407639361,0,0,0.500895729946347,3.69334398206158,4.43864017131499,5.29405626110463,1.97104211012333,5.14941957908386,5.13653904676515,4.78632953972018,2.9104124088305,3.05971408466491,5.99597571268193,3.44207954562704,4.89693314689703,6.62470547252299,6.44437837946972,0.42438965179803,23.9822078226017,12.8085327049142,12.5375898786689,2.87986361028132,2.75291137280604,1.72269589234506,1.29228598847722,1.72376986148711,2.28028103347649,2.52030129759931,2.43903561720835,15.8757668364908,14.7615549020297,15.8481681015439,5.48818077527422,3.32469290716985,4.28755648150975,0.837063261473815,3.1253413780952,1.0470474879476,0,1.36609096991689,1.45653105909346,20.2693876940679,25.0401020112201,22.9433440202102,44.5963066278382,63.8813708194708,47.2325292879114,40.4414190074509,43.9557363903638,53.1884488150395,6.20795642413625,5.80289713609076,10.0828139742739,19.551717138732,22.6361417551618,20.1112115988203,62.1111534838965,51.8411159686592,69.7214543856797,34.2232977389823,50.6898033783349,8.99899717281399,6.92206453796882,7.8152812644071,42.2436155830951,53.4063444396961,68.7462129605207,72.7682007607813,72.9827615889296,72.5553500385661,76.8622522511615,65.1651051823555,80.2226592422638,74.4567217154117,52.8556228797066,60.2684235762086,55.9127781052726,70.2953913601933,85.8154096990603,65.6350846901518,48.8570248252417,37.7050948721226,52.8681937307763,61.8720029494702,68.0536634219712,55.5470348559396,16.3568577599678,18.8928900266964,20.5803786978191,6.0229671388697,8.83962733820076,13.4925797909454,8.4470934268197,9.40856462904405,10.3928870897496,17.724753548118,11.6903702071291,19.0803370235584,30.9855523508697,21.815501160434,15.2883143823987,0,12.9894624606728,12.92135313923,18.704404465547,13.5878816865681,5.69663344023778,22.2663208597237,18.9099006175088,18.2679286987285,19.1410862722529,17.0316583824463,17.9910721917628,21.3633205260448,6.67426412882809,18.3641183288288,4.42305275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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:20286 | |||
|HGNC= | |||
|MCL_coexpression_id=620 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:F8VPP8,uniprot:Q3UGE6 | |||
|association_with_transcript=209bp_to_ENSMUST00000109554,NM_001081016,uc007wxd.1,uc007wxe.1_5end | |||
|cluster_id=chr15:81575487..81575561,+ | |||
|description=CAGE_peak_1_at_Zc3h7b_5end | |||
|id=chr15:81575487..81575561,+ | |||
|ontology_enrichment_celltype=CL:0000221!1.90e-20!44;CL:0000133!1.90e-20!44;CL:0002319!3.39e-20!43;CL:0000055!1.40e-18!50;CL:0000540!2.39e-17!33;CL:0000047!2.39e-17!33;CL:0000031!2.39e-17!33;CL:0000404!2.39e-17!33;CL:0000393!1.42e-16!39;CL:0000211!1.42e-16!39;CL:0000117!1.16e-14!23;CL:0000337!1.16e-14!23;CL:0002321!9.71e-08!70;CL:0000220!9.71e-08!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,1.90e-20,44;CL:0000133,1.90e-20,44;CL:0002319,3.39e-20,43;CL:0000540,2.39e-17,33;CL:0000047,2.39e-17,33;CL:0000031,2.39e-17,33;CL:0000404,2.39e-17,33;CL:0000393,1.42e-16,39;CL:0000211,1.42e-16,39;CL:0000117,1.16e-14,23;CL:0000337,1.16e-14,23;CL:0002321,9.52e-08,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.56e-35!73;UBERON:0005743!1.56e-35!73;UBERON:0000073!1.36e-34!75;UBERON:0001016!1.36e-34!75;UBERON:0004121!1.50e-28!102;UBERON:0000924!1.50e-28!102;UBERON:0006601!1.50e-28!102;UBERON:0001049!2.85e-25!52;UBERON:0005068!2.85e-25!52;UBERON:0006241!2.85e-25!52;UBERON:0007135!2.85e-25!52;UBERON:0002346!8.47e-25!71;UBERON:0003075!8.47e-25!71;UBERON:0007284!8.47e-25!71;UBERON:0000955!6.52e-24!50;UBERON:0006238!6.52e-24!50;UBERON:0002616!1.87e-23!49;UBERON:0000033!2.37e-23!63;UBERON:0002020!1.14e-20!34;UBERON:0003056!3.02e-19!49;UBERON:0003080!3.20e-19!40;UBERON:0002780!9.39e-19!39;UBERON:0001890!9.39e-19!39;UBERON:0006240!9.39e-19!39;UBERON:0002791!1.91e-17!29;UBERON:0003528!1.91e-17!29;UBERON:0001893!1.91e-17!29;UBERON:0000153!1.33e-13!94;UBERON:0000956!4.08e-13!21;UBERON:0001869!4.08e-13!21;UBERON:0000203!4.08e-13!21;UBERON:0007811!4.40e-13!86;UBERON:0000025!6.91e-13!114;UBERON:0004111!7.13e-12!122;UBERON:0002619!1.01e-10!17;UBERON:0002021!2.64e-07!10;UBERON:0000411!2.64e-07!10;UBERON:0001950!2.64e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.56e-35,73;UBERON:0001016,1.36e-34,75;UBERON:0004121,1.18e-29,95;UBERON:0000924,1.18e-29,95;UBERON:0006601,1.18e-29,95;UBERON:0000073,7.01e-27,54;UBERON:0002346,1.46e-26,64;UBERON:0003075,1.46e-26,64;UBERON:0007284,1.46e-26,64;UBERON:0001049,2.85e-25,52;UBERON:0005068,2.85e-25,52;UBERON:0006241,2.85e-25,52;UBERON:0007135,2.85e-25,52;UBERON:0010314,2.00e-24,92;UBERON:0010371,1.91e-23,73;UBERON:0000955,3.74e-22,47;UBERON:0006238,3.74e-22,47;UBERON:0002616,1.05e-21,46;UBERON:0002020,1.14e-20,34;UBERON:0003056,3.02e-19,49;UBERON:0003080,3.20e-19,40;UBERON:0002780,9.39e-19,39;UBERON:0001890,9.39e-19,39;UBERON:0006240,9.39e-19,39;UBERON:0003528,1.91e-17,29;UBERON:0002791,1.91e-17,29;UBERON:0001893,1.91e-17,29;UBERON:0000956,4.08e-13,21;UBERON:0001869,4.08e-13,21;UBERON:0000203,4.08e-13,21;UBERON:0000025,6.90e-13,114;UBERON:0004111,7.13e-12,122;UBERON:0002619,1.01e-10,17;UBERON:0002021,2.63e-07,10;UBERON:0000411,2.63e-07,10;UBERON:0001950,2.63e-07,10 | |||
|phase1_expression=32.9906625035876,0.348975407639361,0,0,0.500895729946347,3.69334398206158,4.43864017131499,5.29405626110463,1.97104211012333,5.14941957908386,5.13653904676515,4.78632953972018,2.9104124088305,3.05971408466491,5.99597571268193,3.44207954562704,4.89693314689703,6.62470547252299,6.44437837946972,0.42438965179803,23.9822078226017,12.8085327049142,12.5375898786689,2.87986361028132,2.75291137280604,1.72269589234506,1.29228598847722,1.72376986148711,2.28028103347649,2.52030129759931,2.43903561720835,15.8757668364908,14.7615549020297,15.8481681015439,5.48818077527422,3.32469290716985,4.28755648150975,0.837063261473815,3.1253413780952,1.0470474879476,0,1.36609096991689,1.45653105909346,20.2693876940679,25.0401020112201,22.9433440202102,44.5963066278382,63.8813708194708,47.2325292879114,40.4414190074509,43.9557363903638,53.1884488150395,6.20795642413625,5.80289713609076,10.0828139742739,19.551717138732,22.6361417551618,20.1112115988203,62.1111534838965,51.8411159686592,69.7214543856797,34.2232977389823,50.6898033783349,8.99899717281399,6.92206453796882,7.8152812644071,42.2436155830951,53.4063444396961,68.7462129605207,72.7682007607813,72.9827615889296,72.5553500385661,76.8622522511615,65.1651051823555,80.2226592422638,74.4567217154117,52.8556228797066,60.2684235762086,55.9127781052726,70.2953913601933,85.8154096990603,65.6350846901518,48.8570248252417,37.7050948721226,52.8681937307763,61.8720029494702,68.0536634219712,55.5470348559396,16.3568577599678,18.8928900266964,20.5803786978191,6.0229671388697,8.83962733820076,13.4925797909454,8.4470934268197,9.40856462904405,10.3928870897496,17.724753548118,11.6903702071291,19.0803370235584,30.9855523508697,21.815501160434,15.2883143823987,0,12.9894624606728,12.92135313923,18.704404465547,13.5878816865681,5.69663344023778,22.2663208597237,18.9099006175088,18.2679286987285,19.1410862722529,17.0316583824463,17.9910721917628,21.3633205260448,6.67426412882809,18.3641183288288,4.42305275974937,18.9267214438469,13.471332626084,8.727754556434,5.59175283654366,42.1604347696628,46.2877222057736,4.34276993854605,9.10594946244994,8.99854096490112,5.59108999121485,45.6861450184709,44.3775584734068,66.0941892113667,46.5849178115301,49.0973678074235,39.2719404217569,42.6694521868203,32.0793996128496,11.9430691785689,15.1633655060205,15.5726973355991,25.7638477066153,20.2313851901456,29.3501271582719,23.2085419467001,29.7319501291303,28.8255870640912,31.9522880748675,19.9201595469042,40.7423506643072,34.2282005103753,32.0231045978387,22.7963561724678,23.0779216857246,19.5021213252413,18.9319565495308,30.253208556411,4.21327912387941,4.88961023517959,7.38825098428541,24.0265896141182,18.5275587385066,18.9065164534066,22.9642393517654,22.0375939557092,18.0492522078233,20.2304531932855,18.2425912951741,22.4189457344965,23.8611782374547,20.3567655458078,26.1041566737655,25.0001978497318,18.2226595691572,25.0966003081895,39.9550902271842,47.027407857333,2.64335026387038,1.58670339998127,27.9407608201156,27.1716906076713,19.2012517369919,9.07575860805041,10.4517680607089,9.3210556795154,2.37264530772256,5.27036655116835,8.54539709920916,8.95304124185179,11.1129529657898,7.19055526923377,5.18731319699266,5.57595565112228,23.8981555200883,27.3053945137252,31.5581659884625,27.0856266034268,24.8259183574561,30.8597607517402,26.6858186664366,26.5698266363284,22.4508180813166,20.7307235388625,8.00422093135302,12.1796927172749,11.2038627214526,7.64531182108503,8.72298521970563,7.95884627182976,7.63877555344259,11.7955416354832,9.72811360650212,6.58947391651396,8.62609239164127,14.1413560114031,14.3537329632698,14.3969960429854,6.63770430031075,6.75420929908714,19.7685913478267,20.6545638829828,24.4447464663039,22.4063513223248,24.1730955737157,22.6133447546451,24.2804513703734,21.2695676165001,26.3250690657339,26.575762757853,33.9638657240448,19.6635977658886,17.4411831684555,18.5150794984335,6.03165135757089,3.80733978673097,9.34352118736169,12.417153583713,30.9862638676438,30.006191767604,21.8033477350978,12.3710754330143,35.3369205746207,32.7968545209176,38.7762115919038,33.9335693092624,39.6581639866662,25.1938112402061,36.4329631507405,32.1481443702443,41.505216684385,43.378377716944,20.7232524404072,35.9692519407856,35.6722440984332,27.5500105364134,9.2921596837974,22.3358185262583,20.8603254305678,12.4479352638893,16.832207894204,14.1420168054207,14.4719844174204,19.2672876623078,18.1813662976208,11.6933600436252,10.5418608574999,10.3135543248187,13.9580238359053,27.7294084808218,31.6928775267749,28.7211626942334,28.3744373827638,34.9602882500058,30.1124707701881,28.9241701658869,19.2430800612242,15.6755732439227,10.5853631066382,11.0473789470792,19.3757312035087,18.3954421030875,18.1445962884767,13.29541287935,7.57850175237612,28.5554965096185,6.4930934703184,24.5600372876235,16.2971184085346,6.40452753815949,7.79157098009843,6.40578884978263,15.8079939894285,12.4556792568056,12.2997976685937,4.77335309007557,29.7355833966267,27.4481280621246,16.4168118049138,19.0270349373167,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| |||
|short_description=p1@Zc3h7b | |||
}} |
Revision as of 16:45, 5 August 2015
Short description: | p1@Zc3h7b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Zc3h7b_5end |
Coexpression cluster: | MCL_coexpression_mm9:620 |
Association with transcript: | 209bp_to_ENSMUST00000109554, NM_001081016, uc007wxd.1, uc007wxe.1_5end |
EntrezGene: | 20286 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 1.90e-20 | 44 |
neurectodermal cell | 1.90e-20 | 44 |
neural cell | 3.39e-20 | 43 |
neuron | 2.39e-17 | 33 |
neuronal stem cell | 2.39e-17 | 33 |
neuroblast | 2.39e-17 | 33 |
electrically signaling cell | 2.39e-17 | 33 |
electrically responsive cell | 1.42e-16 | 39 |
electrically active cell | 1.42e-16 | 39 |
CNS neuron (sensu Vertebrata) | 1.16e-14 | 23 |
neuroblast (sensu Vertebrata) | 1.16e-14 | 23 |
embryonic cell | 9.52e-08 | 70 |