FFCP PHASE1:Mm9::chr6:39370401..39370412,-: Difference between revisions
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{{FFCP|EntrezGene=54484|HGNC=|MCL_coexpression_id=15|UniProt=Q8C5V4,Q99LD7,Q8C5B6|association_with_transcript=-33bp_to_NM_018810,uc009blr.1,uc009blt.1,uc009blu.1_5end|description=CAGE_peak_4_at_Mkrn1_5end|id=chr6:39370401..39370412,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002106,6.35e-07,6;UBERON:0004457,6.35e-07,6;UBERON:0000042,6.35e-07,6;UBERON:0004854,6.35e-07,6;UBERON:0009034,6.35e-07,6;UBERON:0002095,6.35e-07,6;UBERON:0004782,6.35e-07,6;UBERON:0003281,6.35e-07,6;UBERON:0009664,6.35e-07,6;UBERON:0002296,6.35e-07,6;UBERON:0005602,6.35e-07,6;UBERON:0001179,6.35e-07,6;UBERON:0006293,6.35e-07,6|phase1_expression=0.160148847104794,2.09385244583617,4.54999239389536,0.90739263392049,1.00179145989269,0.671517087647559,0.934450562382103,0.129123323441576,0.281577444303333,0.234064526321993,0,0,0.171200729931206,0.174840804837995,5.99597571268193,6.88415909125408,11.8925519281785,1.26184866143295,0.548457734422955,0.84877930359606,2.97651515528744,0.0992909512008853,0,0.639969691173627,0.68822784320151,2.29692785646008,3.01533397311352,3.66301095566011,2.28028103347649,2.26827116783938,1.55211357458713,0,0,0,0,0,0,0.837063261473815,0.7813353445238,0.523523743973798,0.588231488031014,0.683045484958446,0.485510353031154,0,0,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.338844532069132,0,0,0,0,0,0.384218305321555,0.103689612308478,0.540023753326763,0.210324961351382,0.571301968807607,0.883474163806454,0.367472397644862,0.479227355091182,0,0,0.255374676170375,0.153606533256243,0.131886287730194,0.731901148819277,0.52091337055676,0.837548997004143,0,0.15279824777681,0,0.569486723196412,0.559198337475902,0.151452386666368,0,0,0,2.719885334831,0,0,0,1.40444420131752,0,0,0,0.14084341977668,0,0,0,0.216491041011214,0,0,0.68510327831436,0,0,0.346970653532272,0.608930956624282,0.691846491768175,0.904335843315735,0.705532242814229,0.628332956648377,0.741584903203122,1.44599356919912,5.30766331169925,0.808834249737046,3.75430581382669,4.84875253135222,0,0.292780797011547,0,1.02182822083437,0,0,0,0,0,0.251308704225729,0.173824320192276,0.511430914660661,0.41557608911912,0.324482526135515,0.101839363850316,3.6078021476927,1.51633655060205,0.420883711772948,0,0.459804208866946,0.540186389416048,1.05493372485001,0.272145996605311,0.12811372028485,0,0,0,0,0,0.219195732427575,0.278047249225598,0,0.205782136407943,0,0,0,0,0,0.234526059981096,1.62055855314913,0.946978942340841,0.196764231747404,1.07986979021165,0.465067889500816,0.804820204198858,0.467061369468678,0.16455984991348,0.492502392237286,1.78351381000883,4.5321996101853,7.90380415047782,3.75777972529041,0.420579897128254,0.411618449517138,1.32167513193519,0.793351699990633,0.213288250535234,0.232236671860439,0,0,0.22237804384487,0,0.474529061544512,0.164698954724011,0,0.198956472041151,0,1.79763881730844,0.648414149624083,0.796565093017469,0.189667900953082,0.114248512609729,1.1270773567308,0,0.193952487167626,0.140271639780637,0.0632365371242573,0.295220295959204,0.470996183524124,0.246794327843601,0,0.667380422864376,1.76903095601883,4.94696647246678,5.88294352026658,6.75296047306767,9.93040821947537,6.04161888646702,5.0261920300261,1.09824565275233,1.43768206527355,1.11642284300551,0.312037673114561,0.252578877947112,0.179397413521912,0,1.10851914099963,0,0.325929952884052,0.509235257325564,0,1.00503754465089,0.952174563544055,3.70753930929818,3.94087860265477,3.5434350343804,1.91345722388985,4.7520361267564,5.00786447411097,3.61622646453779,1.50791283939272,0,0.491764273019036,0,0.481651769963376,0.820481806145422,0,0,0.315508219416257,0,0,0,0,0,0,0,0,0.642642632843614,0,0.712262414669021,0.325773918707152,0,0,0.242780636154981,0.604647113929502,0.188605079755898,0.295301892880773,0.307435147943927,0.775284879504663,0,0,0.316036757935816,0,0,0,0.18006109403131,0.129358683782755,0.214337035031592,0,0.891844088010353,0.658196082408484,0.608929898229199,0.469343416127421,0.42366414172764,0,0.32977250588296,0,0.0603129249281559,0,0.328281799490123,0,0.927126510052548,5.80960994712699,1.44470807574256,2.40752885580625,7.91147519419702,6.56132293060921,15.0993594316305,0,0.279902904647316,0,0,0,0.203319467126849,0.324016022465404,0.209088296014469,0.218362563746178,0,0.330613822901344,0,1.16653475962614,0.621339313086926,15.2197093444731,0.149516546043979,0.330916980914195,0.194451188344048,1.03327858782185,0.506868376472335,0.352071715937262,0.39061315453185,0.104859344425711,1.93267296660805,7.4887801627045,0,0.202725215290164,0.205421914329655,0.25984164595559,0.179026695667481,0,0.120195449519969,0.147689527174577,0.302899349844443,0.381034033274999,0.100826185136841,0,0.384847366561318,0.467507608726276,0,0.443971906748129,0.269141569828427,0.167884616364078,0,0.187682475451182,0,0.214368379079066,0,1.12950368523413,0.920650473014354,2.29158205375759,0.68741272937475,0,0,0,0.45032120322422,0.45314240898420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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:54484 | |||
|HGNC= | |||
|MCL_coexpression_id=15 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8C5V4,uniprot:Q99LD7,uniprot:Q8C5B6 | |||
|association_with_transcript=-33bp_to_NM_018810,uc009blr.1,uc009blt.1,uc009blu.1_5end | |||
|cluster_id=chr6:39370401..39370412,- | |||
|description=CAGE_peak_4_at_Mkrn1_5end | |||
|id=chr6:39370401..39370412,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,6.35e-07,6;UBERON:0004457,6.35e-07,6;UBERON:0000042,6.35e-07,6;UBERON:0004854,6.35e-07,6;UBERON:0009034,6.35e-07,6;UBERON:0002095,6.35e-07,6;UBERON:0004782,6.35e-07,6;UBERON:0003281,6.35e-07,6;UBERON:0009664,6.35e-07,6;UBERON:0002296,6.35e-07,6;UBERON:0005602,6.35e-07,6;UBERON:0001179,6.35e-07,6;UBERON:0006293,6.35e-07,6 | |||
|phase1_expression=0.160148847104794,2.09385244583617,4.54999239389536,0.90739263392049,1.00179145989269,0.671517087647559,0.934450562382103,0.129123323441576,0.281577444303333,0.234064526321993,0,0,0.171200729931206,0.174840804837995,5.99597571268193,6.88415909125408,11.8925519281785,1.26184866143295,0.548457734422955,0.84877930359606,2.97651515528744,0.0992909512008853,0,0.639969691173627,0.68822784320151,2.29692785646008,3.01533397311352,3.66301095566011,2.28028103347649,2.26827116783938,1.55211357458713,0,0,0,0,0,0,0.837063261473815,0.7813353445238,0.523523743973798,0.588231488031014,0.683045484958446,0.485510353031154,0,0,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.338844532069132,0,0,0,0,0,0.384218305321555,0.103689612308478,0.540023753326763,0.210324961351382,0.571301968807607,0.883474163806454,0.367472397644862,0.479227355091182,0,0,0.255374676170375,0.153606533256243,0.131886287730194,0.731901148819277,0.52091337055676,0.837548997004143,0,0.15279824777681,0,0.569486723196412,0.559198337475902,0.151452386666368,0,0,0,2.719885334831,0,0,0,1.40444420131752,0,0,0,0.14084341977668,0,0,0,0.216491041011214,0,0,0.68510327831436,0,0,0.346970653532272,0.608930956624282,0.691846491768175,0.904335843315735,0.705532242814229,0.628332956648377,0.741584903203122,1.44599356919912,5.30766331169925,0.808834249737046,3.75430581382669,4.84875253135222,0,0.292780797011547,0,1.02182822083437,0,0,0,0,0,0.251308704225729,0.173824320192276,0.511430914660661,0.41557608911912,0.324482526135515,0.101839363850316,3.6078021476927,1.51633655060205,0.420883711772948,0,0.459804208866946,0.540186389416048,1.05493372485001,0.272145996605311,0.12811372028485,0,0,0,0,0,0.219195732427575,0.278047249225598,0,0.205782136407943,0,0,0,0,0,0.234526059981096,1.62055855314913,0.946978942340841,0.196764231747404,1.07986979021165,0.465067889500816,0.804820204198858,0.467061369468678,0.16455984991348,0.492502392237286,1.78351381000883,4.5321996101853,7.90380415047782,3.75777972529041,0.420579897128254,0.411618449517138,1.32167513193519,0.793351699990633,0.213288250535234,0.232236671860439,0,0,0.22237804384487,0,0.474529061544512,0.164698954724011,0,0.198956472041151,0,1.79763881730844,0.648414149624083,0.796565093017469,0.189667900953082,0.114248512609729,1.1270773567308,0,0.193952487167626,0.140271639780637,0.0632365371242573,0.295220295959204,0.470996183524124,0.246794327843601,0,0.667380422864376,1.76903095601883,4.94696647246678,5.88294352026658,6.75296047306767,9.93040821947537,6.04161888646702,5.0261920300261,1.09824565275233,1.43768206527355,1.11642284300551,0.312037673114561,0.252578877947112,0.179397413521912,0,1.10851914099963,0,0.325929952884052,0.509235257325564,0,1.00503754465089,0.952174563544055,3.70753930929818,3.94087860265477,3.5434350343804,1.91345722388985,4.7520361267564,5.00786447411097,3.61622646453779,1.50791283939272,0,0.491764273019036,0,0.481651769963376,0.820481806145422,0,0,0.315508219416257,0,0,0,0,0,0,0,0,0.642642632843614,0,0.712262414669021,0.325773918707152,0,0,0.242780636154981,0.604647113929502,0.188605079755898,0.295301892880773,0.307435147943927,0.775284879504663,0,0,0.316036757935816,0,0,0,0.18006109403131,0.129358683782755,0.214337035031592,0,0.891844088010353,0.658196082408484,0.608929898229199,0.469343416127421,0.42366414172764,0,0.32977250588296,0,0.0603129249281559,0,0.328281799490123,0,0.927126510052548,5.80960994712699,1.44470807574256,2.40752885580625,7.91147519419702,6.56132293060921,15.0993594316305,0,0.279902904647316,0,0,0,0.203319467126849,0.324016022465404,0.209088296014469,0.218362563746178,0,0.330613822901344,0,1.16653475962614,0.621339313086926,15.2197093444731,0.149516546043979,0.330916980914195,0.194451188344048,1.03327858782185,0.506868376472335,0.352071715937262,0.39061315453185,0.104859344425711,1.93267296660805,7.4887801627045,0,0.202725215290164,0.205421914329655,0.25984164595559,0.179026695667481,0,0.120195449519969,0.147689527174577,0.302899349844443,0.381034033274999,0.100826185136841,0,0.384847366561318,0.467507608726276,0,0.443971906748129,0.269141569828427,0.167884616364078,0,0.187682475451182,0,0.214368379079066,0,1.12950368523413,0.920650473014354,2.29158205375759,0.68741272937475,0,0,0,0.45032120322422,0.453142408984205,1.03552062350364,0,0,1.53660245178721,0.972426868273176,1.04806581313991,1.83843508450014,1.33348036680969,1.64828045791115,2.24643446714271,1.26348605881899,1.52087579934144,2.45214243801899,2.52832070168682,2.36893063898016,2.01024141344646,2.38146845641537,1.85414921511769,1.92909220463705,2.06042950401653,2.06078488188156,2.74295401908332,2.30718548007139,2.62279808942053,1.30811774969096,1.12931256498397,2.19997980518359,2.19513567447327,0.789209134313529,1.49384525230448,5.05028044491965,2.72860541685601,1.47756723563345,2.45538625901814,2.01417893541756,2.3148793317737,0.749431733813838,2.33931608445408,0.859484216193193,0.191288332068843,1.32354851471709,1.15933917810211 | |||
|short_description=p4@Mkrn1 | |||
}} |
Revision as of 16:31, 5 August 2015
Short description: | p4@Mkrn1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Mkrn1_5end |
Coexpression cluster: | MCL_coexpression_mm9:15 |
Association with transcript: | -33bp_to_NM_018810, uc009blr.1, uc009blt.1, uc009blu.1_5end |
EntrezGene: | 54484 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
spleen | 6.35e-07 | 6 |
cavity lining | 6.35e-07 | 6 |
serous membrane | 6.35e-07 | 6 |
gastrointestinal system mesentery | 6.35e-07 | 6 |
stomach region | 6.35e-07 | 6 |
mesentery | 6.35e-07 | 6 |
gastrointestinal system serosa | 6.35e-07 | 6 |
mesentery of stomach | 6.35e-07 | 6 |
gut mesentery | 6.35e-07 | 6 |
dorsal mesentery | 6.35e-07 | 6 |
dorsal mesogastrium | 6.35e-07 | 6 |
peritoneal cavity | 6.35e-07 | 6 |
spleen primordium | 6.35e-07 | 6 |