FFCP PHASE1:Mm9::chr9:75531716..75531721,-: Difference between revisions
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{{FFCP|EntrezGene=20255|HGNC=|MCL_coexpression_id=1|UniProt=P47867|association_with_transcript=81bp_to_ENSMUST00000034699_5end|description=CAGE_peak_4_at_Scg3_5end|id=chr9:75531716..75531721,-|ontology_enrichment_celltype=CL:0000221!1.24e-08!44;CL:0000133!1.24e-08!44;CL:0002319!2.89e-08!43;CL:0000117!7.15e-08!23;CL:0000337!7.15e-08!23|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!1.71e-29!63;UBERON:0000073!4.83e-29!75;UBERON:0001016!4.83e-29!75;UBERON:0001017!6.19e-28!73;UBERON:0005743!6.19e-28!73;UBERON:0001049!1.13e-27!52;UBERON:0005068!1.13e-27!52;UBERON:0006241!1.13e-27!52;UBERON:0007135!1.13e-27!52;UBERON:0002346!1.47e-27!71;UBERON:0003075!1.47e-27!71;UBERON:0007284!1.47e-27!71;UBERON:0004121!9.87e-27!102;UBERON:0000924!9.87e-27!102;UBERON:0006601!9.87e-27!102;UBERON:0000955!1.28e-26!50;UBERON:0006238!1.28e-26!50;UBERON:0002616!6.26e-26!49;UBERON:0003056!3.54e-23!49;UBERON:0003080!4.12e-21!40;UBERON:0002780!2.42e-20!39;UBERON:0001890!2.42e-20!39;UBERON:0006240!2.42e-20!39;UBERON:0002020!2.61e-18!34;UBERON:0007811!3.77e-16!86;UBERON:0002791!1.07e-15!29;UBERON:0003528!1.07e-15!29;UBERON:0001893!1.07e-15!29;UBERON:0000153!1.53e-13!94;UBERON:0000956!1.32e-12!21;UBERON:0001869!1.32e-12!21;UBERON:0000203!1.32e-12!21;UBERON:0002619!5.42e-11!17;UBERON:0002021!7.03e-10!10;UBERON:0000411!7.03e-10!10;UBERON:0001950!7.03e-10!10;UBERON:0001264!3.10e-07!12;UBERON:0003922!3.10e-07!12;UBERON:0002114!3.10e-07!12;UBERON:0003923!3.10e-07!12;UBERON:0003924!3.10e-07!12;UBERON:0003921!3.10e-07!12;UBERON:0003076!4.93e-07!12;UBERON:0003057!4.93e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.27e-31,54;UBERON:0001049,4.65e-29,52;UBERON:0005068,4.65e-29,52;UBERON:0006241,4.65e-29,52;UBERON:0007135,4.65e-29,52;UBERON:0000955,1.94e-28,47;UBERON:0006238,1.94e-28,47;UBERON:0001016,4.36e-28,75;UBERON:0001017,2.24e-27,73;UBERON:0002616,3.50e-27,46;UBERON:0002346,1.28e-23,64;UBERON:0003075,1.28e-23,64;UBERON:0007284,1.28e-23,64;UBERON:0003080,2.06e-22,40;UBERON:0004121,1.88e-21,95;UBERON:0000924,1.88e-21,95;UBERON:0006601,1.88e-21,95;UBERON:0010371,3.91e-21,73;UBERON:0002780,4.72e-21,39;UBERON:0001890,4.72e-21,39;UBERON:0006240,4.72e-21,39;UBERON:0002021,1.93e-19,10;UBERON:0000411,1.93e-19,10;UBERON:0001950,1.93e-19,10;UBERON:0003056,1.25e-18,49;UBERON:0010314,5.57e-15,92;UBERON:0002020,2.41e-14,34;UBERON:0003528,5.13e-14,29;UBERON:0002791,5.13e-14,29;UBERON:0001893,5.13e-14,29;UBERON:0002619,1.31e-12,17;UBERON:0001264,4.19e-12,12;UBERON:0000956,9.81e-12,21;UBERON:0001869,9.81e-12,21;UBERON:0000203,9.81e-12,21;UBERON:0000025,8.10e-09,114;UBERON:0004111,1.77e-08,122;UBERON:0001894,3.67e-08,10;UBERON:0006222,3.67e-08,10;UBERON:0002950,2.05e-07,4;UBERON:0001891,2.05e-07,4;UBERON:0009616,2.05e-07,4;UBERON:0010286,2.05e-07,4;UBERON:0003076,4.48e-07,12;UBERON:0003057,4.48e-07,12;UBERON:0002075,6.36e-07,19|phase1_expression=2.24208385946712,0.348975407639361,0,0,0,0.671517087647559,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0.159992422793407,0,0,0.430761996159075,0.215471232685889,0.950117097281869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.659058548203415,0.972149495371417,0.699932108126813,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0.299600110518405,1.53687322128622,0.622137673850866,0.405017814995072,0.210324961351382,1.42825492201902,0.662605622854841,0.244981598429908,0.287536413054709,0,1.10115880999389,2.29837208553338,1.84327839907492,0.527545150920775,0.823388792421687,0,4.74611098302348,1.12552522006336,3.20876320331301,1.76777151284201,0.427115042397309,0.931997229126503,0.302904773332736,2.04043212288321,0,0,0,0,0,0,0.702222100658759,0,0,0,0.563373679106722,0,0,0,0,0,0,0.34255163915718,0,0.445326417194474,0,0,0,0.150722640552623,0.470354828542819,0,0,0,0,0,0,0,0,6.73395833126558,6.70229461803056,0,0,0,0,3.14560342750128,4.11750542536764,0.376963056338593,7.47444576826789,5.62574006126727,1.45451631191692,3.0825839982874,0.101839363850316,0,0,0.420883711772948,0,0.459804208866946,0.360124259610698,0.150704817835715,0.272145996605311,0.768682321709099,0.374806898238915,1.55222022443409,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57492912559016,0.823236899034275,0,0,0.213288250535234,0.232236671860439,0.128867461322093,0.80673409849337,0.22237804384487,0,0,0.658795818896044,0.251335208800269,0.596869416123452,0,0,0.432276099749388,0.398282546508734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0.275936746304732,8.66973185934077,5.74337264301796,0,0.252470927204373,0.315508219416257,0,0.215423397732799,0,0,0.566153061577665,0,0,0,1.60660658210904,0.141940085208269,0,0,0,1.32745138339963,1.45668381692989,0.906970670894253,2.64047111658257,2.95301892880773,1.84461088766356,2.32585463851399,3.99887102425256,1.78248689192361,1.26414703174326,2.10837217149998,0,9.53230896110606,0,0.129358683782755,0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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:20255 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P47867 | |||
|association_with_transcript=81bp_to_ENSMUST00000034699_5end | |||
|cluster_id=chr9:75531716..75531721,- | |||
|description=CAGE_peak_4_at_Scg3_5end | |||
|id=chr9:75531716..75531721,- | |||
|ontology_enrichment_celltype=CL:0000221!1.24e-08!44;CL:0000133!1.24e-08!44;CL:0002319!2.89e-08!43;CL:0000117!7.15e-08!23;CL:0000337!7.15e-08!23 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!1.71e-29!63;UBERON:0000073!4.83e-29!75;UBERON:0001016!4.83e-29!75;UBERON:0001017!6.19e-28!73;UBERON:0005743!6.19e-28!73;UBERON:0001049!1.13e-27!52;UBERON:0005068!1.13e-27!52;UBERON:0006241!1.13e-27!52;UBERON:0007135!1.13e-27!52;UBERON:0002346!1.47e-27!71;UBERON:0003075!1.47e-27!71;UBERON:0007284!1.47e-27!71;UBERON:0004121!9.87e-27!102;UBERON:0000924!9.87e-27!102;UBERON:0006601!9.87e-27!102;UBERON:0000955!1.28e-26!50;UBERON:0006238!1.28e-26!50;UBERON:0002616!6.26e-26!49;UBERON:0003056!3.54e-23!49;UBERON:0003080!4.12e-21!40;UBERON:0002780!2.42e-20!39;UBERON:0001890!2.42e-20!39;UBERON:0006240!2.42e-20!39;UBERON:0002020!2.61e-18!34;UBERON:0007811!3.77e-16!86;UBERON:0002791!1.07e-15!29;UBERON:0003528!1.07e-15!29;UBERON:0001893!1.07e-15!29;UBERON:0000153!1.53e-13!94;UBERON:0000956!1.32e-12!21;UBERON:0001869!1.32e-12!21;UBERON:0000203!1.32e-12!21;UBERON:0002619!5.42e-11!17;UBERON:0002021!7.03e-10!10;UBERON:0000411!7.03e-10!10;UBERON:0001950!7.03e-10!10;UBERON:0001264!3.10e-07!12;UBERON:0003922!3.10e-07!12;UBERON:0002114!3.10e-07!12;UBERON:0003923!3.10e-07!12;UBERON:0003924!3.10e-07!12;UBERON:0003921!3.10e-07!12;UBERON:0003076!4.93e-07!12;UBERON:0003057!4.93e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.27e-31,54;UBERON:0001049,4.65e-29,52;UBERON:0005068,4.65e-29,52;UBERON:0006241,4.65e-29,52;UBERON:0007135,4.65e-29,52;UBERON:0000955,1.94e-28,47;UBERON:0006238,1.94e-28,47;UBERON:0001016,4.36e-28,75;UBERON:0001017,2.24e-27,73;UBERON:0002616,3.50e-27,46;UBERON:0002346,1.28e-23,64;UBERON:0003075,1.28e-23,64;UBERON:0007284,1.28e-23,64;UBERON:0003080,2.06e-22,40;UBERON:0004121,1.88e-21,95;UBERON:0000924,1.88e-21,95;UBERON:0006601,1.88e-21,95;UBERON:0010371,3.91e-21,73;UBERON:0002780,4.72e-21,39;UBERON:0001890,4.72e-21,39;UBERON:0006240,4.72e-21,39;UBERON:0002021,1.93e-19,10;UBERON:0000411,1.93e-19,10;UBERON:0001950,1.93e-19,10;UBERON:0003056,1.25e-18,49;UBERON:0010314,5.57e-15,92;UBERON:0002020,2.41e-14,34;UBERON:0003528,5.13e-14,29;UBERON:0002791,5.13e-14,29;UBERON:0001893,5.13e-14,29;UBERON:0002619,1.31e-12,17;UBERON:0001264,4.19e-12,12;UBERON:0000956,9.81e-12,21;UBERON:0001869,9.81e-12,21;UBERON:0000203,9.81e-12,21;UBERON:0000025,8.10e-09,114;UBERON:0004111,1.77e-08,122;UBERON:0001894,3.67e-08,10;UBERON:0006222,3.67e-08,10;UBERON:0002950,2.05e-07,4;UBERON:0001891,2.05e-07,4;UBERON:0009616,2.05e-07,4;UBERON:0010286,2.05e-07,4;UBERON:0003076,4.48e-07,12;UBERON:0003057,4.48e-07,12;UBERON:0002075,6.36e-07,19 | |||
|phase1_expression=2.24208385946712,0.348975407639361,0,0,0,0.671517087647559,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0.159992422793407,0,0,0.430761996159075,0.215471232685889,0.950117097281869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.659058548203415,0.972149495371417,0.699932108126813,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0.299600110518405,1.53687322128622,0.622137673850866,0.405017814995072,0.210324961351382,1.42825492201902,0.662605622854841,0.244981598429908,0.287536413054709,0,1.10115880999389,2.29837208553338,1.84327839907492,0.527545150920775,0.823388792421687,0,4.74611098302348,1.12552522006336,3.20876320331301,1.76777151284201,0.427115042397309,0.931997229126503,0.302904773332736,2.04043212288321,0,0,0,0,0,0,0.702222100658759,0,0,0,0.563373679106722,0,0,0,0,0,0,0.34255163915718,0,0.445326417194474,0,0,0,0.150722640552623,0.470354828542819,0,0,0,0,0,0,0,0,6.73395833126558,6.70229461803056,0,0,0,0,3.14560342750128,4.11750542536764,0.376963056338593,7.47444576826789,5.62574006126727,1.45451631191692,3.0825839982874,0.101839363850316,0,0,0.420883711772948,0,0.459804208866946,0.360124259610698,0.150704817835715,0.272145996605311,0.768682321709099,0.374806898238915,1.55222022443409,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57492912559016,0.823236899034275,0,0,0.213288250535234,0.232236671860439,0.128867461322093,0.80673409849337,0.22237804384487,0,0,0.658795818896044,0.251335208800269,0.596869416123452,0,0,0.432276099749388,0.398282546508734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0.275936746304732,8.66973185934077,5.74337264301796,0,0.252470927204373,0.315508219416257,0,0.215423397732799,0,0,0.566153061577665,0,0,0,1.60660658210904,0.141940085208269,0,0,0,1.32745138339963,1.45668381692989,0.906970670894253,2.64047111658257,2.95301892880773,1.84461088766356,2.32585463851399,3.99887102425256,1.78248689192361,1.26414703174326,2.10837217149998,0,9.53230896110606,0,0.129358683782755,0.428674070063185,2.83744373827638,2.49716344642899,2.96188237083818,3.65357938937519,0,0,0,0,0,0,0,0,0.291480836629851,8.15871328846243,0,0.206386867963223,0,0.188368457004691,0,0,0,0,0,0,0,0.406638934253697,0.108005340821801,0,0,0,0.0826534557253359,0.26175594198403,0.129614973291793,0,0,0,0,0.388902376688095,0.129159823477731,0.168956125490778,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,5.64751842617067,7.36520378411483,6.87474616127276,6.8741272937475,8.90607275701835,4.5323633843382,5.40018000185445,8.55610286126019,3.17199686288943,8.80192529978094,0.103787347584177,0.399024873401031,0,0,0,0,0.222246727801615,0,0.320919209591815,0,0,0,0.187283014939765,0.256100609619477,0.0574354689556133,0,0,0,0,0,0.685738504770831,0.177475806159338,0,0,0.188218760830661,0.25384382367503,0,0.263069711437843,0.135804113845862,0,0.237270036248348,0,0,0.154936841185966,0,0.249810577937946,0,0,0.191288332068843,0.441182838239031,0 | |||
|short_description=p4@Scg3 | |||
}} |
Revision as of 15:44, 5 August 2015
Short description: | p4@Scg3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Scg3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 81bp_to_ENSMUST00000034699_5end |
EntrezGene: | 20255 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data