FFCP PHASE1:Mm9::chr9:75021886..75021903,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=138|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr9:75021886..75021903,+|id=chr9:75021886..75021903,+|ontology_enrichment_celltype=CL:0000393!1.36e-11!39;CL:0000211!1.36e-11!39;CL:0000540!2.19e-11!33;CL:0000047!2.19e-11!33;CL:0000031!2.19e-11!33;CL:0000404!2.19e-11!33;CL:0000117!4.17e-08!23;CL:0000337!4.17e-08!23;CL:0000055!4.03e-07!50;CL:0002319!4.41e-07!43|ontology_enrichment_celltype_v019_2=CL:0000540,1.36e-16,33;CL:0000047,1.36e-16,33;CL:0000031,1.36e-16,33;CL:0000404,1.36e-16,33;CL:0000393,6.46e-15,39;CL:0000211,6.46e-15,39;CL:0000117,1.24e-13,23;CL:0000337,1.24e-13,23;CL:0002319,1.28e-11,43;CL:0000221,3.02e-11,44;CL:0000133,3.02e-11,44;CL:0002321,9.46e-08,70;CL:0002610,1.45e-07,3;CL:0002609,1.99e-07,6;CL:0000723,4.59e-07,91;CL:0000048,4.59e-07,91|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!6.69e-19!75;UBERON:0001016!6.69e-19!75;UBERON:0001017!9.74e-19!73;UBERON:0005743!9.74e-19!73;UBERON:0002346!3.64e-18!71;UBERON:0003075!3.64e-18!71;UBERON:0007284!3.64e-18!71;UBERON:0004121!1.59e-17!102;UBERON:0000924!1.59e-17!102;UBERON:0006601!1.59e-17!102;UBERON:0001049!9.27e-16!52;UBERON:0005068!9.27e-16!52;UBERON:0006241!9.27e-16!52;UBERON:0007135!9.27e-16!52;UBERON:0000955!1.49e-15!50;UBERON:0006238!1.49e-15!50;UBERON:0002616!4.41e-15!49;UBERON:0000033!3.47e-14!63;UBERON:0003056!6.75e-14!49;UBERON:0002020!8.13e-14!34;UBERON:0003080!3.02e-13!40;UBERON:0002780!1.11e-12!39;UBERON:0001890!1.11e-12!39;UBERON:0006240!1.11e-12!39;UBERON:0002791!1.42e-11!29;UBERON:0003528!1.42e-11!29;UBERON:0001893!1.42e-11!29;UBERON:0000956!3.07e-10!21;UBERON:0001869!3.07e-10!21;UBERON:0000203!3.07e-10!21;UBERON:0007811!1.46e-09!86;UBERON:0002619!4.54e-09!17;UBERON:0000153!1.19e-08!94;UBERON:0002021!2.58e-08!10;UBERON:0000411!2.58e-08!10;UBERON:0001950!2.58e-08!10|ontology_enrichment_uberon_v019_2=UBERON:0002020,6.84e-26,34;UBERON:0000073,1.19e-24,54;UBERON:0001017,7.64e-24,73;UBERON:0003528,5.11e-23,29;UBERON:0002791,5.11e-23,29;UBERON:0001893,5.11e-23,29;UBERON:0001016,5.58e-23,75;UBERON:0000956,1.07e-21,21;UBERON:0001869,1.07e-21,21;UBERON:0000203,1.07e-21,21;UBERON:0002021,1.50e-20,10;UBERON:0000411,1.50e-20,10;UBERON:0001950,1.50e-20,10;UBERON:0001049,1.48e-19,52;UBERON:0005068,1.48e-19,52;UBERON:0006241,1.48e-19,52;UBERON:0007135,1.48e-19,52;UBERON:0002346,4.77e-19,64;UBERON:0003075,4.77e-19,64;UBERON:0007284,4.77e-19,64;UBERON:0004121,5.12e-19,95;UBERON:0000924,5.12e-19,95;UBERON:0006601,5.12e-19,95;UBERON:0003080,7.48e-19,40;UBERON:0002619,1.34e-18,17;UBERON:0003056,1.36e-17,49;UBERON:0002780,1.48e-17,39;UBERON:0001890,1.48e-17,39;UBERON:0006240,1.48e-17,39;UBERON:0002616,3.52e-17,46;UBERON:0000955,1.10e-16,47;UBERON:0006238,1.10e-16,47;UBERON:0010371,8.75e-16,73;UBERON:0010314,4.80e-12,92;UBERON:0004684,1.45e-07,3;UBERON:0002275,1.45e-07,3;UBERON:0000025,7.83e-07,114|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0.140788722151667,0,0.34243593645101,0.159544317990673,0,0,0,0,0,0.157731082679119,0.411343300817216,0,0.17008658030214,0.198581902401771,0.261199789138935,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0.837063261473815,0,0.523523743973798,0.588231488031014,0.683045484958446,0,0.125896817975577,0.202753862439029,0.183546752161682,0,0,0,0.388859798148567,0,0,0.503347818173209,0.725362142011344,0,0.514518872071894,0.573066879877513,1.54701627683233,0.404632921719196,0.528990979272033,0,0,0,0,0,0.7104801149461,0,0,1.76272340924412,1.08004750665353,1.26194976810829,0.571301968807607,0.441737081903227,0.489963196859816,1.24599112323707,1.83843757322004,4.40463523997555,10.214987046815,12.1349161272432,0.131886287730194,1.00636407962651,1.56274011167028,0.558365998002762,0,3.97275444219706,3.24091444021034,2.13557521198654,1.67759501242771,0.227178579999552,0.453429360640713,0,0,0,0.539703191637817,0,0,0.280888840263504,0.170430322578058,1.03914401841148,1.06001872353102,0,0,0,0,0.649473123033642,1.01343946190039,1.01104889002957,0,0.258937883647172,0,0.173485326766136,0.608930956624282,0.230615497256059,0.60289056221049,0.823120949949934,0.251333182659351,0.247194967734374,0.144599356919912,0,0.323533699894818,0,1.45462575940567,0,0.878342391034642,0.41889341362691,0,0.479260498023681,0,0.127070227073065,1.64769703345305,0.915001205637253,1.00523481690292,0.173824320192276,1.79000820131231,0.62336413367868,1.62241263067758,0.712875546952214,0.124406970610093,0.252722758433675,0,0.520481771850815,0,0.360124259610698,2.26057226753573,0.340182495756639,0.768682321709099,0.562210347358373,1.55222022443409,0.215567992932842,0.189106080167819,0,0,0.556094498451196,0,0.205782136407943,0,0,0,0,0,0.234526059981096,0.36012412292203,0,0.196764231747404,0.308534225774757,0,0,0.700592054203017,0.16455984991348,0.820837320395476,0.0810688095458557,0,0,0,0.630869845692382,1.9551876352064,0,0,1.70630600428187,0,0,0,0,0,0,0.164698954724011,0.251335208800269,0.198956472041151,0.19496408711912,0,0.2161380498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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=138 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr9:75021886..75021903,+ | |||
|description=CAGE_peak_at_chr9:75021886..75021903,+ | |||
|id=chr9:75021886..75021903,+ | |||
|ontology_enrichment_celltype=CL:0000393!1.36e-11!39;CL:0000211!1.36e-11!39;CL:0000540!2.19e-11!33;CL:0000047!2.19e-11!33;CL:0000031!2.19e-11!33;CL:0000404!2.19e-11!33;CL:0000117!4.17e-08!23;CL:0000337!4.17e-08!23;CL:0000055!4.03e-07!50;CL:0002319!4.41e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.36e-16,33;CL:0000047,1.36e-16,33;CL:0000031,1.36e-16,33;CL:0000404,1.36e-16,33;CL:0000393,6.46e-15,39;CL:0000211,6.46e-15,39;CL:0000117,1.24e-13,23;CL:0000337,1.24e-13,23;CL:0002319,1.28e-11,43;CL:0000221,3.02e-11,44;CL:0000133,3.02e-11,44;CL:0002321,9.46e-08,70;CL:0002610,1.45e-07,3;CL:0002609,1.99e-07,6;CL:0000723,4.59e-07,91;CL:0000048,4.59e-07,91 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!6.69e-19!75;UBERON:0001016!6.69e-19!75;UBERON:0001017!9.74e-19!73;UBERON:0005743!9.74e-19!73;UBERON:0002346!3.64e-18!71;UBERON:0003075!3.64e-18!71;UBERON:0007284!3.64e-18!71;UBERON:0004121!1.59e-17!102;UBERON:0000924!1.59e-17!102;UBERON:0006601!1.59e-17!102;UBERON:0001049!9.27e-16!52;UBERON:0005068!9.27e-16!52;UBERON:0006241!9.27e-16!52;UBERON:0007135!9.27e-16!52;UBERON:0000955!1.49e-15!50;UBERON:0006238!1.49e-15!50;UBERON:0002616!4.41e-15!49;UBERON:0000033!3.47e-14!63;UBERON:0003056!6.75e-14!49;UBERON:0002020!8.13e-14!34;UBERON:0003080!3.02e-13!40;UBERON:0002780!1.11e-12!39;UBERON:0001890!1.11e-12!39;UBERON:0006240!1.11e-12!39;UBERON:0002791!1.42e-11!29;UBERON:0003528!1.42e-11!29;UBERON:0001893!1.42e-11!29;UBERON:0000956!3.07e-10!21;UBERON:0001869!3.07e-10!21;UBERON:0000203!3.07e-10!21;UBERON:0007811!1.46e-09!86;UBERON:0002619!4.54e-09!17;UBERON:0000153!1.19e-08!94;UBERON:0002021!2.58e-08!10;UBERON:0000411!2.58e-08!10;UBERON:0001950!2.58e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,6.84e-26,34;UBERON:0000073,1.19e-24,54;UBERON:0001017,7.64e-24,73;UBERON:0003528,5.11e-23,29;UBERON:0002791,5.11e-23,29;UBERON:0001893,5.11e-23,29;UBERON:0001016,5.58e-23,75;UBERON:0000956,1.07e-21,21;UBERON:0001869,1.07e-21,21;UBERON:0000203,1.07e-21,21;UBERON:0002021,1.50e-20,10;UBERON:0000411,1.50e-20,10;UBERON:0001950,1.50e-20,10;UBERON:0001049,1.48e-19,52;UBERON:0005068,1.48e-19,52;UBERON:0006241,1.48e-19,52;UBERON:0007135,1.48e-19,52;UBERON:0002346,4.77e-19,64;UBERON:0003075,4.77e-19,64;UBERON:0007284,4.77e-19,64;UBERON:0004121,5.12e-19,95;UBERON:0000924,5.12e-19,95;UBERON:0006601,5.12e-19,95;UBERON:0003080,7.48e-19,40;UBERON:0002619,1.34e-18,17;UBERON:0003056,1.36e-17,49;UBERON:0002780,1.48e-17,39;UBERON:0001890,1.48e-17,39;UBERON:0006240,1.48e-17,39;UBERON:0002616,3.52e-17,46;UBERON:0000955,1.10e-16,47;UBERON:0006238,1.10e-16,47;UBERON:0010371,8.75e-16,73;UBERON:0010314,4.80e-12,92;UBERON:0004684,1.45e-07,3;UBERON:0002275,1.45e-07,3;UBERON:0000025,7.83e-07,114 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0.140788722151667,0,0.34243593645101,0.159544317990673,0,0,0,0,0,0.157731082679119,0.411343300817216,0,0.17008658030214,0.198581902401771,0.261199789138935,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0.837063261473815,0,0.523523743973798,0.588231488031014,0.683045484958446,0,0.125896817975577,0.202753862439029,0.183546752161682,0,0,0,0.388859798148567,0,0,0.503347818173209,0.725362142011344,0,0.514518872071894,0.573066879877513,1.54701627683233,0.404632921719196,0.528990979272033,0,0,0,0,0,0.7104801149461,0,0,1.76272340924412,1.08004750665353,1.26194976810829,0.571301968807607,0.441737081903227,0.489963196859816,1.24599112323707,1.83843757322004,4.40463523997555,10.214987046815,12.1349161272432,0.131886287730194,1.00636407962651,1.56274011167028,0.558365998002762,0,3.97275444219706,3.24091444021034,2.13557521198654,1.67759501242771,0.227178579999552,0.453429360640713,0,0,0,0.539703191637817,0,0,0.280888840263504,0.170430322578058,1.03914401841148,1.06001872353102,0,0,0,0,0.649473123033642,1.01343946190039,1.01104889002957,0,0.258937883647172,0,0.173485326766136,0.608930956624282,0.230615497256059,0.60289056221049,0.823120949949934,0.251333182659351,0.247194967734374,0.144599356919912,0,0.323533699894818,0,1.45462575940567,0,0.878342391034642,0.41889341362691,0,0.479260498023681,0,0.127070227073065,1.64769703345305,0.915001205637253,1.00523481690292,0.173824320192276,1.79000820131231,0.62336413367868,1.62241263067758,0.712875546952214,0.124406970610093,0.252722758433675,0,0.520481771850815,0,0.360124259610698,2.26057226753573,0.340182495756639,0.768682321709099,0.562210347358373,1.55222022443409,0.215567992932842,0.189106080167819,0,0,0.556094498451196,0,0.205782136407943,0,0,0,0,0,0.234526059981096,0.36012412292203,0,0.196764231747404,0.308534225774757,0,0,0.700592054203017,0.16455984991348,0.820837320395476,0.0810688095458557,0,0,0,0.630869845692382,1.9551876352064,0,0,1.70630600428187,0,0,0,0,0,0,0.164698954724011,0.251335208800269,0.198956472041151,0.19496408711912,0,0.216138049874694,0,0,0.685491075658373,0,0.203651327845314,0.193952487167626,0.280543279561274,0.189709611372772,0.295220295959204,0.470996183524124,0,0,0,0,0,0,0,0,0,0.162135226775035,0,2.87536413054709,0,0,0.252578877947112,0.179397413521912,0,0.184753190166605,0.189491411770485,0.162964976442026,0.678980343100753,0.469380496577004,0,0,0,0,0.44292937929755,0.318909537314974,0.163863314715738,0.172684981865896,0.433947175744535,6.03165135757089,1.63171705145613,0.491764273019036,0,0.642202359951168,1.05490517932983,0.655739781506702,0.252470927204373,0.94652465824877,0.780877488593277,1.29254038639679,0.716906393857656,1.78238939265915,0.566153061577665,1.21443210502468,2.33804686329049,1.18586333383957,0.963963949265421,0.141940085208269,0,0.81443479676788,0,0,0.485561272309963,0.302323556964751,0.188605079755898,0,0,0.516856586336442,0,0.356497378384721,0,0,0,0.680879211507576,0.36012218806262,0.129358683782755,0.643011105094777,0.177340233642274,0.535106452806212,0.329098041204242,0.304464949114599,0,0,0,0,0.322928853391811,0.120625849856312,0.238744688006273,0,0.582961673259701,0.741701208042039,0,0.206386867963223,0.185194527369712,0.376736914009382,0.410082683163076,0,0.509935289981566,0.139951452323658,0,0,0,0,0.540026704109006,0.627264888043406,0.436725127492355,0.134864346384821,0.0826534557253359,0,0.259229946583586,0,0,0,0,0,0.129159823477731,0.675824501963113,0.234714477291508,0.13020438484395,0.314578033277133,1.20792060413003,0,0,0,0.410843828659309,0.25984164595559,0,0.39736270956253,0.240390899039938,0.147689527174577,0.100966449948148,0.228620419965,0.302478555410522,0.194915761479505,0.384847366561318,0.350630706544707,0.226730383615211,0,0,0,0.19318959403219,0.750729901804728,0,0.214368379079066,0,5.64751842617067,8.74617949363636,6.87474616127276,5.84300819968538,1.37016503954128,6.7985450765073,7.42524750254986,5.85417564191487,6.34399372577886,5.1776031175182,0.726511433089237,0,0.170733605754134,0,0,0.183843508450014,0.222246727801615,0,0,0,0,0,0,0.128050304809739,0.17230640686684,0,0.115884325944855,0.192909220463705,0.412085900803307,0.441596760403192,0.342869252385415,0.532427418478012,0.238436189947321,0,0.188218760830661,0.338458431566706,0.548783918618318,0.789209134313529,0.271608227691724,0,0.474540072496697,0.29551344712669,0.409231043169689,0,0.192906610981141,0,0.233931608445408,0.429742108096597,0.382576664137687,0,0 | |||
|short_description=p@chr9:75021886..75021903,+ | |||
}} |
Latest revision as of 15:21, 5 August 2015
Short description: | p@chr9:75021886..75021903, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:75021886..75021903, + |
Coexpression cluster: | MCL_coexpression_mm9:138 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.36e-16 | 33 |
neuronal stem cell | 1.36e-16 | 33 |
neuroblast | 1.36e-16 | 33 |
electrically signaling cell | 1.36e-16 | 33 |
electrically responsive cell | 6.46e-15 | 39 |
electrically active cell | 6.46e-15 | 39 |
CNS neuron (sensu Vertebrata) | 1.24e-13 | 23 |
neuroblast (sensu Vertebrata) | 1.24e-13 | 23 |
neural cell | 1.28e-11 | 43 |
ectodermal cell | 3.02e-11 | 44 |
neurectodermal cell | 3.02e-11 | 44 |
embryonic cell | 9.46e-08 | 70 |
raphe nuclei neuron | 1.45e-07 | 3 |
neuron of cerebral cortex | 1.99e-07 | 6 |
somatic stem cell | 4.59e-07 | 91 |
multi fate stem cell | 4.59e-07 | 91 |