Personal tools

FFCP PHASE1:Mm9::chr18:24762269..24762286,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP|EntrezGene=106957|HGNC=|UniProt=Q8C145|association_with_transcript=31bp_to_ENSMUST00000070726,NM_139143,uc008egv.1_5end|description=CAGE_peak_3_at_Slc39a6_5end|id=chr18:24762269..24762286,-|ontology_enrichment_celltype=CL:0000107!7.79e-07!9|ontology_enrichment_celltype_v019_2=CL:0000107,7.67e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000010!4.15e-08!11;UBERON:0003133!6.55e-07!24;UBERON:0002410!7.79e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0000010,4.08e-08,11;UBERON:0003133,6.45e-07,24;UBERON:0002410,7.67e-07,9|phase1_expression=6.40595388419176,1.04692622291808,0.454999239389536,2.72217790176147,3.50627010962443,0.839396359559449,0.467225281191051,2.1950964985068,41.39188431259,36.045937053587,9.58820622062828,9.97151987441705,1.71200729931206,2.01066925563694,1.99865857089398,1.61980213911861,0,3.15462165358238,1.7824876368746,2.12194825899015,6.4632900514813,26.9078477754399,31.3439746966722,0.159992422793407,0.91763712426868,0,0.86152399231815,0,0.760093677825496,0.252030129759931,0.443461021310609,3.17515336729816,3.07532393792285,0,1.1554064790051,0.831173226792462,1.83752420636132,2.51118978442145,0,1.0470474879476,1.17646297606203,0.683045484958446,1.45653105909346,10.8271263458996,11.0500855029271,15.9685674380663,3.12956537739216,1.09012578190223,3.73466510648602,3.30530828426282,5.03951117851305,2.87505128729943,8.38913030288682,11.6057942721815,9.74672017513146,27.0122407837744,13.7536051170603,9.28209766099396,2.63011399117477,9.52183762689659,2.53532561402472,7.79342423759004,4.4464739805557,3.5995988691256,5.93319817540185,5.6838409195688,3.89480143673926,3.07374644257244,4.56234294157302,3.37514845829227,4.83747411108179,1.71390590642282,3.97563373712904,2.69479758272899,5.55903731905771,2.75765635983006,1.10115880999389,2.55374676170375,3.5329502648936,5.80299666012853,5.58074625974699,4.16730696445408,0.837548997004143,1.68828783009504,2.44477196442896,7.07108605136802,4.41352210477219,8.20157561631323,48.540489926571,26.9790469581224,16.8121403446973,0.860423876981386,4.0798280022465,0.539703191637817,0.649776417447669,1.34408066129201,1.54488862144927,8.52151612890289,4.93593408745451,6.36011234118612,5.21120653173718,2.56652954828636,2.54805239706646,7.11066703153331,2.16491041011214,3.04031838570118,6.0662933401774,1.82694207550496,3.88406825470758,4.00793775475027,8.84775166507293,7.30717147949139,4.15107895060905,5.27529241934179,5.17390311397101,1.88499886994513,6.17987419335935,3.32578520915797,5.30766331169925,5.3383060482645,2.20841518460394,1.45462575940567,1.86391761218122,2.63502717310392,0.41889341362691,0.766371165625774,7.6681679683789,7.7987355029143,11.1821799824297,2.69623150928681,0.915001205637253,1.38219787324151,1.73824320192276,2.04572365864264,2.49345653471472,2.27137768294861,5.29564692021645,3.85661608891288,10.108910337347,8.41767423545896,7.28674480591141,8.04657365517155,7.38254732201932,7.23383125611432,3.87808045162569,3.33095672740609,2.43624483855295,3.3631438196072,15.089759505299,11.535470890237,7.38994721488585,8.76782929710299,12.7901734643775,10.7958171621872,10.7006710932131,7.36426787228425,3.51106593656617,5.40430604940902,5.39910648851626,3.72826390563903,7.73935997937617,3.6012412292203,3.55117103377815,4.13204886669548,2.62254091908543,3.48800917125612,2.41446061259657,1.75148013550754,1.97471819896177,1.31333971263276,2.1888578577381,2.04679982395465,2.85415149878366,1.34206418760372,2.3131894342054,4.32199371992995,0.991256348951394,0.793351699990633,9.17139477301506,8.82499353069666,4.89696353023955,4.03367049246685,3.33567065767305,2.28270751335071,0.474529061544512,1.64698954724011,1.00534083520108,1.98956472041151,1.9496408711912,0.898819408654221,0.864552199498777,1.1948476395262,10.4317345524195,7.5404018322421,5.63538678365402,3.46207257337034,3.49114476901726,2.24434623649019,2.52946148497029,1.03327103585722,1.255989822731,1.85095745882701,3.85388415213294,1.33476084572875,2.35870794135844,0.899448449539415,1.42002084971952,2.17059443777175,2.03700681425136,0.575392274901621,0.972811360650212,0.549122826376163,4.31304619582064,0.744281895337007,0.312037673114561,1.01031551178845,0.358794827043824,0.964887042726734,8.68339993783042,12.506433176852,8.47417877498535,6.28056817368196,5.39787571063555,3.1826188913945,6.18913466303636,6.04914308359176,7.40885177299098,5.09368786192182,8.45110273884682,9.83179888294428,8.97961905702657,7.5217510462386,10.5553898757491,5.98296252200581,23.6046851049137,12.417153583713,3.05046120976805,2.93029216480508,9.3442918864705,0.757412781613119,32.8128548192907,29.2829058222479,22.8348801596767,24.6137861891129,23.8394581268162,17.2676683781188,29.1463705205924,34.4861912335348,35.9711877931336,4.81981974632711,6.67118400478862,6.94455854302295,4.72372182125371,4.61916344323099,1.32745138339963,6.5550771761845,4.23252979750651,2.64047111658257,5.02013217897314,1.53717573971964,4.13485269069154,3.27180356529755,3.92147116223193,1.58018378967908,0,0,2.7235168460303,8.10274923140896,6.98536892426874,4.71541477069503,2.83744373827638,5.35106452806212,7.24015690649332,11.5696680663548,33.7927259611743,21.8187032989735,1.7642271844397,29.3497530235834,14.3703339759356,33.1721087104857,66.7291402977533,78.2952091783942,1.7488850197791,5.19190845629427,3.41741761595705,3.09580301944834,4.25947412950337,1.13021074202815,1.0935538217682,2.0590035588587,4.07948231985253,5.59805809294632,3.59319931891502,2.86401185404534,9.01557581706236,5.69294507955176,5.18425635944646,8.15444354456428,9.60795280483181,7.55240339754996,6.4469695465762,3.40282724579238,0.388844919875379,1.24267862617385,9.58277995763124,9.41954240077066,7.1147150896552,8.36140109879405,7.62042958518613,7.94093789806657,5.63314745499619,9.24451132392046,23.1739151180821,17.3940566994724,14.6895303191511,3.79213344753814,6.89265731986558,6.16265742988964,5.3267537420896,4.833720783022,4.17230845040656,3.12508168751919,2.21534290761866,2.22126189885925,0.914481679859998,2.31900225814733,2.72882066071307,2.30908419936791,2.10378423926824,32.8759056242057,2.44184548711471,10.0479519402613,3.8613461763738,4.82973985080476,24.5864042841048,8.97442958909599,39.01504499239,1.00314420807073,1.12950368523413,3.22227665555024,3.43737308063638,2.06223818812425,0,2.2661816921691,1.35004500046361,2.2516060161211,4.07828168085784,3.10656187051092,6.64239024538731,7.18244772121856,5.12200817262403,7.53630822911712,4.61148957781561,1.83843508450014,8.66762238426299,4.73880631649457,5.77654577265267,3.53776096469316,6.59046179714623,4.90428487603798,4.02658482120494,4.8018864303652,4.88201486122713,3.33405583898152,4.63537303779422,3.8581844092741,3.29668720642645,5.15196220470391,5.14303878578123,4.96932257246145,6.91464950847231,4.21504608233753,6.49354724865781,4.90764725771724,4.93905526756486,5.26139422875686,3.93831930152999,5.05028044491965,4.98267076121531,3.15214343601803,4.50154147486658,3.40861050609125,6.94463799532109,12.4905288968973,6.31615342802603,6.44613162144895,5.7386499620653,9.48543102213917,3.70988536992674|short_description=p3@Slc39a6}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:106957
|HGNC=
|TSSclassifier=NA
|UniProt=uniprot:Q8C145
|association_with_transcript=31bp_to_ENSMUST00000070726,NM_139143,uc008egv.1_5end
|cluster_id=chr18:24762269..24762286,-
|description=CAGE_peak_3_at_Slc39a6_5end
|id=chr18:24762269..24762286,-
|ontology_enrichment_celltype=CL:0000107!7.79e-07!9
|ontology_enrichment_celltype_v019_2=CL:0000107,7.67e-07,9
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000010!4.15e-08!11;UBERON:0003133!6.55e-07!24;UBERON:0002410!7.79e-07!9
|ontology_enrichment_uberon_v019_2=UBERON:0000010,4.08e-08,11;UBERON:0003133,6.45e-07,24;UBERON:0002410,7.67e-07,9
|phase1_expression=6.40595388419176,1.04692622291808,0.454999239389536,2.72217790176147,3.50627010962443,0.839396359559449,0.467225281191051,2.1950964985068,41.39188431259,36.045937053587,9.58820622062828,9.97151987441705,1.71200729931206,2.01066925563694,1.99865857089398,1.61980213911861,0,3.15462165358238,1.7824876368746,2.12194825899015,6.4632900514813,26.9078477754399,31.3439746966722,0.159992422793407,0.91763712426868,0,0.86152399231815,0,0.760093677825496,0.252030129759931,0.443461021310609,3.17515336729816,3.07532393792285,0,1.1554064790051,0.831173226792462,1.83752420636132,2.51118978442145,0,1.0470474879476,1.17646297606203,0.683045484958446,1.45653105909346,10.8271263458996,11.0500855029271,15.9685674380663,3.12956537739216,1.09012578190223,3.73466510648602,3.30530828426282,5.03951117851305,2.87505128729943,8.38913030288682,11.6057942721815,9.74672017513146,27.0122407837744,13.7536051170603,9.28209766099396,2.63011399117477,9.52183762689659,2.53532561402472,7.79342423759004,4.4464739805557,3.5995988691256,5.93319817540185,5.6838409195688,3.89480143673926,3.07374644257244,4.56234294157302,3.37514845829227,4.83747411108179,1.71390590642282,3.97563373712904,2.69479758272899,5.55903731905771,2.75765635983006,1.10115880999389,2.55374676170375,3.5329502648936,5.80299666012853,5.58074625974699,4.16730696445408,0.837548997004143,1.68828783009504,2.44477196442896,7.07108605136802,4.41352210477219,8.20157561631323,48.540489926571,26.9790469581224,16.8121403446973,0.860423876981386,4.0798280022465,0.539703191637817,0.649776417447669,1.34408066129201,1.54488862144927,8.52151612890289,4.93593408745451,6.36011234118612,5.21120653173718,2.56652954828636,2.54805239706646,7.11066703153331,2.16491041011214,3.04031838570118,6.0662933401774,1.82694207550496,3.88406825470758,4.00793775475027,8.84775166507293,7.30717147949139,4.15107895060905,5.27529241934179,5.17390311397101,1.88499886994513,6.17987419335935,3.32578520915797,5.30766331169925,5.3383060482645,2.20841518460394,1.45462575940567,1.86391761218122,2.63502717310392,0.41889341362691,0.766371165625774,7.6681679683789,7.7987355029143,11.1821799824297,2.69623150928681,0.915001205637253,1.38219787324151,1.73824320192276,2.04572365864264,2.49345653471472,2.27137768294861,5.29564692021645,3.85661608891288,10.108910337347,8.41767423545896,7.28674480591141,8.04657365517155,7.38254732201932,7.23383125611432,3.87808045162569,3.33095672740609,2.43624483855295,3.3631438196072,15.089759505299,11.535470890237,7.38994721488585,8.76782929710299,12.7901734643775,10.7958171621872,10.7006710932131,7.36426787228425,3.51106593656617,5.40430604940902,5.39910648851626,3.72826390563903,7.73935997937617,3.6012412292203,3.55117103377815,4.13204886669548,2.62254091908543,3.48800917125612,2.41446061259657,1.75148013550754,1.97471819896177,1.31333971263276,2.1888578577381,2.04679982395465,2.85415149878366,1.34206418760372,2.3131894342054,4.32199371992995,0.991256348951394,0.793351699990633,9.17139477301506,8.82499353069666,4.89696353023955,4.03367049246685,3.33567065767305,2.28270751335071,0.474529061544512,1.64698954724011,1.00534083520108,1.98956472041151,1.9496408711912,0.898819408654221,0.864552199498777,1.1948476395262,10.4317345524195,7.5404018322421,5.63538678365402,3.46207257337034,3.49114476901726,2.24434623649019,2.52946148497029,1.03327103585722,1.255989822731,1.85095745882701,3.85388415213294,1.33476084572875,2.35870794135844,0.899448449539415,1.42002084971952,2.17059443777175,2.03700681425136,0.575392274901621,0.972811360650212,0.549122826376163,4.31304619582064,0.744281895337007,0.312037673114561,1.01031551178845,0.358794827043824,0.964887042726734,8.68339993783042,12.506433176852,8.47417877498535,6.28056817368196,5.39787571063555,3.1826188913945,6.18913466303636,6.04914308359176,7.40885177299098,5.09368786192182,8.45110273884682,9.83179888294428,8.97961905702657,7.5217510462386,10.5553898757491,5.98296252200581,23.6046851049137,12.417153583713,3.05046120976805,2.93029216480508,9.3442918864705,0.757412781613119,32.8128548192907,29.2829058222479,22.8348801596767,24.6137861891129,23.8394581268162,17.2676683781188,29.1463705205924,34.4861912335348,35.9711877931336,4.81981974632711,6.67118400478862,6.94455854302295,4.72372182125371,4.61916344323099,1.32745138339963,6.5550771761845,4.23252979750651,2.64047111658257,5.02013217897314,1.53717573971964,4.13485269069154,3.27180356529755,3.92147116223193,1.58018378967908,0,0,2.7235168460303,8.10274923140896,6.98536892426874,4.71541477069503,2.83744373827638,5.35106452806212,7.24015690649332,11.5696680663548,33.7927259611743,21.8187032989735,1.7642271844397,29.3497530235834,14.3703339759356,33.1721087104857,66.7291402977533,78.2952091783942,1.7488850197791,5.19190845629427,3.41741761595705,3.09580301944834,4.25947412950337,1.13021074202815,1.0935538217682,2.0590035588587,4.07948231985253,5.59805809294632,3.59319931891502,2.86401185404534,9.01557581706236,5.69294507955176,5.18425635944646,8.15444354456428,9.60795280483181,7.55240339754996,6.4469695465762,3.40282724579238,0.388844919875379,1.24267862617385,9.58277995763124,9.41954240077066,7.1147150896552,8.36140109879405,7.62042958518613,7.94093789806657,5.63314745499619,9.24451132392046,23.1739151180821,17.3940566994724,14.6895303191511,3.79213344753814,6.89265731986558,6.16265742988964,5.3267537420896,4.833720783022,4.17230845040656,3.12508168751919,2.21534290761866,2.22126189885925,0.914481679859998,2.31900225814733,2.72882066071307,2.30908419936791,2.10378423926824,32.8759056242057,2.44184548711471,10.0479519402613,3.8613461763738,4.82973985080476,24.5864042841048,8.97442958909599,39.01504499239,1.00314420807073,1.12950368523413,3.22227665555024,3.43737308063638,2.06223818812425,0,2.2661816921691,1.35004500046361,2.2516060161211,4.07828168085784,3.10656187051092,6.64239024538731,7.18244772121856,5.12200817262403,7.53630822911712,4.61148957781561,1.83843508450014,8.66762238426299,4.73880631649457,5.77654577265267,3.53776096469316,6.59046179714623,4.90428487603798,4.02658482120494,4.8018864303652,4.88201486122713,3.33405583898152,4.63537303779422,3.8581844092741,3.29668720642645,5.15196220470391,5.14303878578123,4.96932257246145,6.91464950847231,4.21504608233753,6.49354724865781,4.90764725771724,4.93905526756486,5.26139422875686,3.93831930152999,5.05028044491965,4.98267076121531,3.15214343601803,4.50154147486658,3.40861050609125,6.94463799532109,12.4905288968973,6.31615342802603,6.44613162144895,5.7386499620653,9.48543102213917,3.70988536992674
|short_description=p3@Slc39a6
}}

Revision as of 14:40, 5 August 2015

Short description:p3@Slc39a6
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Slc39a6_5end
Coexpression cluster:NA
Association with transcript: 31bp_to_ENSMUST00000070726, NM_139143, uc008egv.1_5end
EntrezGene:106957
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Slc39a6

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G76.41
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.05
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I32.72
CD326+ enterocyte, pool2.CNhs13197.11849-124I43.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.84
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.20
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E741.39
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F236.05
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E69.59
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F19.97
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.71
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E82.01
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.62
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A23.15
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.78
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.12
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A36.46
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H226.91
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I931.34
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.92
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.76
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I33.18
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G63.08
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.16
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.83
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.51
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.46
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D810.83
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D911.05
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B315.97
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.13
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.09
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.73
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.31
Mouse Astrocytes, donor2.CNhs12078.11552-120C45.04
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A28.39
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I911.61
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A19.75
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C127.01
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E113.75
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C59.28
Mouse Granule cells, donor1.CNhs12131.11713-123C32.63
Mouse Granule cells, donor2.CNhs12357.11731-123E39.52
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C67.79
Mouse Meningeal cells, donor3.CNhs12109.11639-122D14.45
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C73.60
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E75.93
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D25.68
Mouse Microglia, donor1.CNhs12629.11718-123C83.89
Mouse Microglia, donor2.CNhs12634.11736-123E83.07
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.56
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.38
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D94.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.98
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.69
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F25.56
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.55
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.53
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D45.80
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F45.58
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.17
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.44
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D67.07
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.41
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E18.20
Mouse Schwann, donor1.CNhs12507.11728-123D948.54
Mouse Schwann, donor2.CNhs12573.11746-123F926.98
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G316.81
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C44.08
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.34
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.54
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I78.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E34.94
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I86.36
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G65.21
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G12.16
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G23.04
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G36.07
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.83
accessory axillary lymph node, adult.CNhs10475.1063-29H93.88
adrenal gland, adult.CNhs10508.49-24D74.01
adrenal gland, embryo E14.CNhs11038.406-44C58.85
adrenal gland, embryo E16.CNhs11004.1254-43D67.31
adrenal gland, embryo E17.CNhs11043.1263-45I14.15
adrenal gland, embryo E18.CNhs11026.1262-18F55.28
adrenal gland, neonate N00.CNhs11191.1311-23C15.17
adrenal gland, neonate N25.CNhs11223.1377-27I31.88
amnion, adult pregnant day17.5.CNhs10488.583-22A86.18
aorta, adult.CNhs10498.46-23H13.33
bone (os femoris), adult.CNhs10483.56-12G25.31
bone (os femoris), neonate N02.CNhs11227.1985-43F55.34
bone (os femoris), neonate N16.CNhs11225.1525-43A62.21
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B22.64
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C77.67
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D17.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D411.18
corpora quadrigemina, adult.CNhs10501.16-22A42.70
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F11.38
cortex, adult.CNhs10473.12-14D51.74
cortex, neonate N30.CNhs11107.1392-42F22.05
diencephalon, adult.CNhs10482.20-12F22.49
diencephalon, neonate N30.CNhs11201.1388-42B22.27
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B15.30
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.86
epididymis, adult.CNhs10490.58-23B210.11
eyeball, adult.CNhs10484.31-12G48.42
eyeball, embryo E12.CNhs11016.345-16C67.29
eyeball, embryo E14.CNhs10521.399-16E28.05
eyeball, embryo E15.CNhs10593.426-16C97.38
eyeball, embryo E17.CNhs11023.1261-18D47.23
eyeball, neonate N00.CNhs11207.633-15C63.88
eyeball, neonate N01.CNhs11140.1532-43E73.33
eyeball, neonate N02.CNhs11205.1551-44G82.44
eyeball, neonate N16.CNhs11188.777-19A23.36
forelimb, embryo E11.CNhs10596.335-25E215.09
forelimb, embryo E12.CNhs10600.359-14H211.54
forelimb, embryo E13.CNhs10589.384-1E27.39
forelimb, embryo E14.CNhs10577.413-26A88.77
forelimb, embryo E15.CNhs11007.437-20E712.79
forelimb, embryo E17.CNhs10598.1517-43C410.80
forelimb, embryo E18.CNhs11008.1520-43B510.70
gonad, embryo E13.CNhs11044.1564-45I67.36
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C83.51
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D25.40
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D55.40
heart, embryo E11.CNhs10586.331-24E93.73
heart, embryo E12.CNhs11015.353-12F57.74
heart, embryo E13.CNhs11013.376-3I93.60
heart, embryo E14.CNhs10597.403-26D43.55
heart, embryo E15.CNhs11017.431-16C84.13
heart, embryo E16.CNhs11021.457-17C62.62
heart, embryo E17.CNhs11025.479-18E53.49
heart, embryo E18.CNhs11030.1283-20G32.41
heart, neonate N00.CNhs11213.639-21E31.75
heart, neonate N03.CNhs11221.1349-25I21.97
heart, neonate N10.CNhs11118.749-24G11.31
heart, neonate N16.CNhs11209.782-15G12.19
heart, neonate N20.CNhs11127.821-26I62.05
heart, neonate N25.CNhs11196.1351-25D32.85
heart, neonate N30.CNhs11202.1390-42D21.34
hippocampus, adult.CNhs10478.13-16E82.31
hippocampus, neonate N00.CNhs11228.627-43G14.32
intestinal mucosa, adult.CNhs10506.860-29I30.99
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I59.17
intestine, embryo E13.CNhs11010.381-16D58.82
intestine, embryo E15.CNhs10602.976-16D84.90
intestine, embryo E16.CNhs10585.463-22H44.03
intestine, embryo E17.CNhs10582.482-18D33.34
intestine, embryo E18.CNhs10526.1289-20F72.28
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E91.65
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F21.99
intestine, neonate N10.CNhs11098.755-23A51.95
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.86
intestine, neonate N30.CNhs11131.1384-42G11.19
kidney, embryo E14.CNhs10606.411-4I910.43
kidney, embryo E15.CNhs10997.434-16F87.54
kidney, embryo E16.CNhs10584.464-22A55.64
kidney, embryo E17.CNhs11028.483-18I23.46
kidney, embryo E18.CNhs11001.1288-20C73.49
kidney, neonate N00.CNhs11214.646-21G72.24
kidney, neonate N10.CNhs11206.758-6D52.53
kidney, neonate N20.CNhs11113.832-19I11.03
kidney, neonate N25.CNhs11122.1353-25F31.26
kidney, neonate N30.CNhs11203.1385-42H11.85
liver, adult pregnant day01.CNhs10466.508-5B23.85
liver, embryo E12.CNhs10601.355-15F81.33
liver, embryo E13.CNhs10524.378-3H62.36
liver, embryo E14.CNhs10594.409-16E10.90
liver, embryo E15.CNhs10520.433-16D71.42
liver, embryo E16.CNhs10523.462-17F52.17
liver, embryo E17.CNhs10510.481-18A32.04
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.97
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A31.01
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B18.68
lung, embryo E12.CNhs10522.354-16G212.51
lung, embryo E14.CNhs10604.404-26F88.47
lung, embryo E15.CNhs11020.432-17C56.28
lung, embryo E16.CNhs10998.458-17B65.40
lung, embryo E17.CNhs10605.480-44A63.18
lung, embryo E18.CNhs10583.1287-20I66.19
lung, neonate N00.CNhs11224.640-42C66.05
lung, neonate N06.CNhs11212.683-20E57.41
lung, neonate N07.CNhs11111.715-19A35.09
lung, neonate N10.CNhs11219.750-23E68.45
lung, neonate N20.CNhs11109.822-18A49.83
lung, neonate N25.CNhs11119.1359-25C78.98
lung, neonate N30.CNhs11133.1394-42H27.52
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A110.56
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A15.98
mammary gland, adult lactating day02.CNhs10480.595-22B623.60
mammary gland, adult pregnant day19.CNhs10476.588-5H212.42
medulla oblongata, adult.CNhs10477.17-12C23.05
medulla oblongata, neonate N30.CNhs11200.1396-42A32.93
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C79.34
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E132.81
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E229.28
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E322.83
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D724.61
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D823.84
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D917.27
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D429.15
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D534.49
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D635.97
olfactory brain, adult.CNhs10489.18-22I94.82
ovary, adult.CNhs10507.91-2I76.67
ovary, embryo E18.CNhs11040.505-44H76.94
ovary, neonate N00.CNhs11217.1299-22I44.72
oviduct, adult pregnant day01.CNhs10500.988-6G64.62
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F46.56
pancreas, embryo E15.CNhs11042.1556-45F24.23
pancreas, embryo E16.CNhs11003.460-26E52.64
pancreas, embryo E17.CNhs10599.1558-45G35.02
pancreas, embryo E18.CNhs10580.1535-43I71.54
pancreas, neonate N00.CNhs11105.645-26G94.13
pancreas, neonate N01.CNhs11138.1531-43D73.27
pancreas, neonate N02.CNhs11139.1539-43D83.92
pancreas, neonate N16.CNhs11136.787-43B61.58
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.72
pituitary gland, embryo E12.CNhs11018.346-16E68.10
pituitary gland, embryo E13.CNhs11009.370-44C76.99
pituitary gland, embryo E14.CNhs11037.398-44A54.72
pituitary gland, embryo E15.CNhs10592.427-16B92.84
pituitary gland, embryo E16.CNhs11036.449-43F65.35
pituitary gland, embryo E17.CNhs11039.1265-44F57.24
pituitary gland, neonate N00.CNhs11190.1308-22E911.57
placenta, adult pregnant day10.CNhs10472.539-13I733.79
placenta, adult pregnant day17.CNhs10464.577-18G321.82
prostate, adult.CNhs10470.859-1F81.76
skin, adult.CNhs10492.30-1C329.35
skin, neonate N00.CNhs11124.650-25G414.37
skin, neonate N03.CNhs11215.662-22H333.17
skin, neonate N06.CNhs11097.693-20I566.73
skin, neonate N10.CNhs11108.762-6C478.30
small intestine, neonate N16.CNhs11114.790-21I11.75
spinal cord, adult.CNhs10505.24-13C95.19
spleen, adult.CNhs10465.25-2G23.42
spleen, embryo E16.CNhs11035.461-43C13.10
spleen, embryo E18.CNhs11011.1271-21F24.26
spleen, neonate N10.CNhs11116.752-24D11.13
spleen, neonate N20.CNhs11112.824-19H11.09
spleen, neonate N25.CNhs11099.1354-25G32.06
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C64.08
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C95.60
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D33.59
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E39.02
stomach, embryo E15.CNhs10603.1252-16G85.69
stomach, embryo E16.CNhs11022.459-17D45.18
stomach, embryo E17.CNhs11006.1035-18D58.15
stomach, embryo E18.CNhs10999.1286-20C69.61
stomach, neonate N03.CNhs11193.1340-24B87.55
stomach, neonate N07.CNhs11210.718-18A96.45
stomach, neonate N25.CNhs11104.1355-25E43.40
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G59.58
testis, embryo E13.CNhs11031.389-23F59.42
testis, embryo E15.CNhs11034.443-27C57.11
testis, embryo E16.CNhs11033.470-26G58.36
testis, embryo E17.CNhs11029.486-18I57.62
testis, embryo E18.CNhs11027.503-18G57.94
testis, neonate N00.CNhs11189.1300-22B75.63
testis, neonate N07.CNhs11222.726-26I49.24
testis, neonate N10.CNhs11204.763-44D923.17
testis, neonate N20.CNhs11110.839-18H317.39
testis, neonate N30.CNhs11130.1391-42E214.69
thymus, adult.CNhs10471.38-12B53.79
thymus, embryo E14.CNhs11041.402-44I46.89
thymus, embryo E15.CNhs11005.430-45I26.16
thymus, embryo E16.CNhs11002.456-26C55.33
thymus, embryo E17.CNhs10581.478-18C14.83
thymus, embryo E18.CNhs10595.1273-19G44.17
thymus, neonate N02.CNhs11181.1541-43F83.13
thymus, neonate N03.CNhs11137.2104-43C72.22
thymus, neonate N06.CNhs11197.681-26C42.22
thymus, neonate N07.CNhs11211.713-19D30.91
thymus, neonate N10.CNhs11194.748-24E42.32
thymus, neonate N20.CNhs11186.820-7A22.73
thymus, neonate N25.CNhs11125.1362-25G72.31
thymus, neonate N30.CNhs11132.1393-42G22.10
tongue, adult.CNhs10499.32-1B432.88
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F710.05
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G53.86
urinary bladder, adult.CNhs10481.879-12E44.83
uterus, adult pregnant day19.CNhs10497.590-15F524.59
uterus, adult.CNhs10509.92-27E58.97
vagina, adult.CNhs10502.89-27D539.02
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.22
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A33.44
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.06
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.25
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.08
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.11
whole body, embryo E11.CNhs11014.324-5I86.64
whole body, embryo E12.CNhs10587.857-27C97.18
whole body, embryo E13.CNhs10512.372-23H25.12
whole body, embryo E14.5.CNhs10578.420-27D27.54
whole body, embryo E14.CNhs10519.395-14B14.61
whole body, embryo E16.CNhs10514.453-14F21.84
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G58.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.74
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G55.78
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.54
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G56.59
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G54.90
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G54.03
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.80
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.88
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.64
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.86
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G55.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G55.14
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.97
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G56.91
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G54.22
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G56.49
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.91
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.94
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G55.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.94
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G55.05
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.98
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.15
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.50
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.41
whole body, embryo E17.5.CNhs10513.490-9F96.94
whole body, embryo E17.CNhs10517.475-3I512.49
whole body, embryo E18.CNhs10516.493-3B36.32
whole body, neonate N00.CNhs10525.657-19C26.45
whole body, neonate N01.CNhs10576.659-23C65.74
whole body, neonate N06.CNhs10515.692-21D19.49
whole body, neonate N10.CNhs10518.761-6B43.71





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
autonomic neuron7.67e-079

Uber anatomy
Ontology termp-valuen
peripheral nervous system4.08e-0811
reproductive organ6.45e-0724
autonomic nervous system7.67e-079
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr18:24762269..24762286,-&oldid=3910455"