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FFCP PHASE1:Mm9::chr13:104899700..104899720,-: Difference between revisions

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{{FFCP|EntrezGene=75805|HGNC=|UniProt=Q91YP2,Q3TB65,Q3UUI1|association_with_transcript=-6bp_to_ENSMUST00000109315,NM_029447,uc007rsp.1,uc007rsq.1,uc007rsr.1_5end|description=CAGE_peak_3_at_Nln_5end|id=chr13:104899700..104899720,-|ontology_enrichment_celltype=CL:0000117!9.49e-10!23;CL:0000337!9.49e-10!23;CL:0000540!6.88e-07!33;CL:0000047!6.88e-07!33;CL:0000031!6.88e-07!33;CL:0000404!6.88e-07!33|ontology_enrichment_celltype_v019_2=CL:0000117,1.52e-10,23;CL:0000337,1.52e-10,23;CL:0000540,1.51e-07,33;CL:0000047,1.51e-07,33;CL:0000031,1.51e-07,33;CL:0000404,1.51e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!1.04e-09!34;UBERON:0001049!5.40e-08!52;UBERON:0005068!5.40e-08!52;UBERON:0006241!5.40e-08!52;UBERON:0007135!5.40e-08!52;UBERON:0000073!7.20e-08!75;UBERON:0001016!7.20e-08!75;UBERON:0004121!1.34e-07!102;UBERON:0000924!1.34e-07!102;UBERON:0006601!1.34e-07!102;UBERON:0001017!1.85e-07!73;UBERON:0005743!1.85e-07!73;UBERON:0002791!6.51e-07!29;UBERON:0003528!6.51e-07!29;UBERON:0001893!6.51e-07!29;UBERON:0002346!7.44e-07!71;UBERON:0003075!7.44e-07!71;UBERON:0007284!7.44e-07!71|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.44e-09,34;UBERON:0010314,4.02e-08,92;UBERON:0001016,5.77e-08,75;UBERON:0000073,6.66e-08,54;UBERON:0001049,6.76e-08,52;UBERON:0005068,6.76e-08,52;UBERON:0006241,6.76e-08,52;UBERON:0007135,6.76e-08,52;UBERON:0001017,1.54e-07,73;UBERON:0000922,2.24e-07,320;UBERON:0004121,3.62e-07,95;UBERON:0000924,3.62e-07,95;UBERON:0006601,3.62e-07,95|phase1_expression=1.28119077683835,0,0.454999239389536,0.60492842261366,0,0.839396359559449,0.700837921786577,0.645616617207881,0.84473233291,0.468129052643987,1.88339765048055,3.19088635981346,0.684802919724823,0.262261207256992,1.33243904726265,0.607425802169478,0,1.41957974411207,1.23402990245165,0.84877930359606,1.36069264241712,0.496454756004426,0.261199789138935,0.639969691173627,0.45881856213434,0.57423196411502,0.86152399231815,0.861884930743556,1.14014051673824,1.00812051903972,1.33038306393183,1.90509202037889,1.84519436275371,0,2.3108129580102,1.32987716286794,1.02084678131185,0.418531630736908,0,2.09409497589519,0,0.683045484958446,0,1.00717454380462,1.11514624341466,1.65192076945513,0.782391344348039,2.18025156380447,0.659058548203415,0.777719596297134,1.53985063787899,1.43752564364972,0.838913030288682,0.725362142011344,0.336093799142464,0.514518872071894,2.0057340795713,0.515672092277442,5.26022798234954,5.81890077199236,7.60597684207415,1.0165335962074,0.889294796111139,0.449949858640699,0,0,1.19840044207362,0.768436610643109,2.28117147078651,3.24014251996058,2.3135745748652,4.85606673486466,4.41737081903227,2.32732518508413,3.1629005436018,2.75765635983006,0,3.06449611404451,2.91852413186863,7.51751840062105,7.04454855738554,7.29278718779464,2.23346399201105,0.56276261003168,3.20876320331301,7.95497180778903,7.97281412474976,9.13357284543973,2.19605960666234,2.11600368298999,0.579728977403356,0,0.679971333707751,0.539703191637817,0.649776417447669,0.896053774194671,0.561777680527007,1.1930122580464,0.519572009205738,1.41335829804136,2.39433813620357,0,2.54805239706646,0,1.5154372870785,2.53359865475099,4.04419556011827,0.68510327831436,0.776813650941515,2.07818994690755,2.4287945747259,2.74018930480927,0.922461989024234,1.95939432718409,1.52865319276416,0.879666139307728,2.22475470960936,1.15679485535929,0,0.808834249737046,0.441683036920787,0.484875253135222,0,0.292780797011547,0.41889341362691,0,0.599075622529601,0,0.508280908292259,2.84602214869163,2.74500361691176,12.6910895633993,2.08589184230732,3.06858548796397,1.66230435647648,3.73154905055843,1.01839363850316,0.622034853050465,2.0217820674694,0.631325567659422,1.43132487258974,1.60931473103431,1.80062129805349,1.35634336052144,1.7009124787832,1.15302348256365,1.12442069471675,0,2.37124792226126,1.89106080167819,1.40760899331159,1.31517439456545,0.278047249225598,1.0447564995665,1.4404749548556,1.19420560091096,1.40442637462647,0.51469581422943,1.13665399758237,2.27838349789052,3.28336483973535,2.34080679899319,3.31442629819294,2.36117078096885,2.00547246753592,2.79040733700489,2.14618721119695,1.5179494507732,3.45575684818309,1.64167464079095,1.21603214318784,1.16959989940266,1.3173006917463,1.07365135008297,1.26173969138476,4.42489833230923,0,0.793351699990633,0.853153002140936,1.39342003116263,2.83508414908605,1.4117846723634,1.55664630691409,2.09248188723815,0.474529061544512,1.31759163779209,0.502670417600539,1.98956472041151,0.779856348476481,0,0.864552199498777,0,1.13800740571849,1.82797620175566,0,1.01825663922657,1.35766741017338,1.1221731182451,1.51767689098217,1.32849133181642,1.56998727841375,0.863780147452604,0.296452627087149,1.83529616287703,1.17935397067922,1.57403478669398,1.82574109249653,0.964708639009667,1.2731292589071,0,0.810676133875177,1.64736847912849,2.87536413054709,1.11642284300551,1.5601883655728,0.757736633841335,0.717589654087649,2.8946611281802,0.923765950833023,1.13694847062291,1.140754835094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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:75805
|HGNC=
|TSSclassifier=NA
|UniProt=uniprot:Q91YP2,uniprot:Q3TB65,uniprot:Q3UUI1
|association_with_transcript=-6bp_to_ENSMUST00000109315,NM_029447,uc007rsp.1,uc007rsq.1,uc007rsr.1_5end
|cluster_id=chr13:104899700..104899720,-
|description=CAGE_peak_3_at_Nln_5end
|id=chr13:104899700..104899720,-
|ontology_enrichment_celltype=CL:0000117!9.49e-10!23;CL:0000337!9.49e-10!23;CL:0000540!6.88e-07!33;CL:0000047!6.88e-07!33;CL:0000031!6.88e-07!33;CL:0000404!6.88e-07!33
|ontology_enrichment_celltype_v019_2=CL:0000117,1.52e-10,23;CL:0000337,1.52e-10,23;CL:0000540,1.51e-07,33;CL:0000047,1.51e-07,33;CL:0000031,1.51e-07,33;CL:0000404,1.51e-07,33
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.44e-09,34;UBERON:0010314,4.02e-08,92;UBERON:0001016,5.77e-08,75;UBERON:0000073,6.66e-08,54;UBERON:0001049,6.76e-08,52;UBERON:0005068,6.76e-08,52;UBERON:0006241,6.76e-08,52;UBERON:0007135,6.76e-08,52;UBERON:0001017,1.54e-07,73;UBERON:0000922,2.24e-07,320;UBERON:0004121,3.62e-07,95;UBERON:0000924,3.62e-07,95;UBERON:0006601,3.62e-07,95
|phase1_expression=1.28119077683835,0,0.454999239389536,0.60492842261366,0,0.839396359559449,0.700837921786577,0.645616617207881,0.84473233291,0.468129052643987,1.88339765048055,3.19088635981346,0.684802919724823,0.262261207256992,1.33243904726265,0.607425802169478,0,1.41957974411207,1.23402990245165,0.84877930359606,1.36069264241712,0.496454756004426,0.261199789138935,0.639969691173627,0.45881856213434,0.57423196411502,0.86152399231815,0.861884930743556,1.14014051673824,1.00812051903972,1.33038306393183,1.90509202037889,1.84519436275371,0,2.3108129580102,1.32987716286794,1.02084678131185,0.418531630736908,0,2.09409497589519,0,0.683045484958446,0,1.00717454380462,1.11514624341466,1.65192076945513,0.782391344348039,2.18025156380447,0.659058548203415,0.777719596297134,1.53985063787899,1.43752564364972,0.838913030288682,0.725362142011344,0.336093799142464,0.514518872071894,2.0057340795713,0.515672092277442,5.26022798234954,5.81890077199236,7.60597684207415,1.0165335962074,0.889294796111139,0.449949858640699,0,0,1.19840044207362,0.768436610643109,2.28117147078651,3.24014251996058,2.3135745748652,4.85606673486466,4.41737081903227,2.32732518508413,3.1629005436018,2.75765635983006,0,3.06449611404451,2.91852413186863,7.51751840062105,7.04454855738554,7.29278718779464,2.23346399201105,0.56276261003168,3.20876320331301,7.95497180778903,7.97281412474976,9.13357284543973,2.19605960666234,2.11600368298999,0.579728977403356,0,0.679971333707751,0.539703191637817,0.649776417447669,0.896053774194671,0.561777680527007,1.1930122580464,0.519572009205738,1.41335829804136,2.39433813620357,0,2.54805239706646,0,1.5154372870785,2.53359865475099,4.04419556011827,0.68510327831436,0.776813650941515,2.07818994690755,2.4287945747259,2.74018930480927,0.922461989024234,1.95939432718409,1.52865319276416,0.879666139307728,2.22475470960936,1.15679485535929,0,0.808834249737046,0.441683036920787,0.484875253135222,0,0.292780797011547,0.41889341362691,0,0.599075622529601,0,0.508280908292259,2.84602214869163,2.74500361691176,12.6910895633993,2.08589184230732,3.06858548796397,1.66230435647648,3.73154905055843,1.01839363850316,0.622034853050465,2.0217820674694,0.631325567659422,1.43132487258974,1.60931473103431,1.80062129805349,1.35634336052144,1.7009124787832,1.15302348256365,1.12442069471675,0,2.37124792226126,1.89106080167819,1.40760899331159,1.31517439456545,0.278047249225598,1.0447564995665,1.4404749548556,1.19420560091096,1.40442637462647,0.51469581422943,1.13665399758237,2.27838349789052,3.28336483973535,2.34080679899319,3.31442629819294,2.36117078096885,2.00547246753592,2.79040733700489,2.14618721119695,1.5179494507732,3.45575684818309,1.64167464079095,1.21603214318784,1.16959989940266,1.3173006917463,1.07365135008297,1.26173969138476,4.42489833230923,0,0.793351699990633,0.853153002140936,1.39342003116263,2.83508414908605,1.4117846723634,1.55664630691409,2.09248188723815,0.474529061544512,1.31759163779209,0.502670417600539,1.98956472041151,0.779856348476481,0,0.864552199498777,0,1.13800740571849,1.82797620175566,0,1.01825663922657,1.35766741017338,1.1221731182451,1.51767689098217,1.32849133181642,1.56998727841375,0.863780147452604,0.296452627087149,1.83529616287703,1.17935397067922,1.57403478669398,1.82574109249653,0.964708639009667,1.2731292589071,0,0.810676133875177,1.64736847912849,2.87536413054709,1.11642284300551,1.5601883655728,0.757736633841335,0.717589654087649,2.8946611281802,0.923765950833023,1.13694847062291,1.14075483509418,0.678980343100753,0.469380496577004,1.00503754465089,2.14239276797412,0.780534591431195,0.788175720530955,0.44292937929755,1.2756381492599,0,0.690739927463582,0.433947175744535,1.50791283939272,0.54390568381871,2.45882136509518,0.827810238914197,1.44495530989013,1.52375192569864,0.819674726883377,1.51482556322624,1.26203287766503,0.780877488593277,1.07711698866399,1.19484398976276,1.78238939265915,1.98153571552183,0.404810701674894,0.292255857911312,2.76701444562566,0.642642632843614,1.41940085208269,1.24645922567079,1.95464351224291,1.15479086080775,0,0.971122544619926,2.11626489875326,1.69744571780308,2.06711325016541,0.922305443831782,0.258428293168221,0,1.42598951353889,0.948110273807448,1.05418608574999,0,1.36175842301515,2.52085531643834,0.776152102696527,1.71469628025274,1.59606210278046,0.535106452806212,1.64549020602121,0.608929898229199,1.87737366450968,2.54198485036584,1.10264199027481,0.49465875882444,1.45317984026315,2.65376869683886,1.67121281604391,1.80554989719567,1.1659233465194,2.41052892613663,0.683483523191411,0.82554747185289,1.48155621895769,0.565105371014073,0.27338845544205,0.457556346413045,0.509935289981566,0.69975726161829,0.690999869022119,0,1.73984796469624,1.82987520414164,1.51207477150522,1.04544148007234,1.74690050996942,0.809186078308924,1.32245529160537,1.83229159388821,1.29614973291793,0.621339313086926,1.69107881605257,2.0932316446157,3.80554528051325,2.91676782516071,2.32487682259916,1.68956125490778,2.46450201156083,3.51551839078665,4.50895181030557,3.38217769156408,1.44015003128933,0.948033361884535,1.82452693761148,0.718976700153791,1.29920822977795,1.25318686967237,0.79472541912506,0.721172697119813,0.295379054349154,0.706765149637033,0.381034033274999,0.806609481094724,0.487289403698762,0.577271049841977,0.350630706544707,0.453460767230423,3.99574716073316,4.03712354742641,2.3503846290971,0.965947970160952,0.563047426353546,0.915758121336325,1.07184189539533,2.00628841614145,2.25900737046827,0.920650473014354,1.71868654031819,2.23409137046794,0.685082519770642,6.7985450765073,5.40018000185445,3.60256962579376,2.71885445390523,2.07104124700728,1.14166082342594,2.79317411380722,1.19513524027894,1.45864030240976,2.72497111416377,2.02227859295016,2.00022055021454,1.64828045791115,4.81378814387723,3.03236654116557,5.0695859978048,1.13175804831646,2.1537546718073,2.30490548657529,2.98664438569189,2.38146845641537,2.66533949673168,2.70072908649187,3.70877310722976,2.20798380201596,1.37147700954166,2.30718548007139,1.1921809497366,2.61623549938191,2.35273451038327,2.28459441307527,2.37806364734604,1.31534855718921,1.49384525230448,2.80571135828869,2.01679530811096,2.75812550651578,2.04615521584845,2.32405261778949,0.771626443924566,4.49659040288303,1.40358965067245,2.36358159453128,1.14772999241306,0.661774257358546,0.463735671240843
|short_description=p3@Nln
}}

Revision as of 13:34, 5 August 2015

Short description:p3@Nln
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Nln_5end
Coexpression cluster:NA
Association with transcript: -6bp_to_ENSMUST00000109315, NM_029447, uc007rsp.1, uc007rsq.1, uc007rsr.1_5end
EntrezGene:75805
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p3@Nln

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.28
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.60
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.84
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.70
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.65
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.84
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.88
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F13.19
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.68
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.26
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.61
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.42
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.23
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.36
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.50
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I20.86
Ileum epithelium, pool1.CNhs13199.10252-104B91.14
Ileum epithelium, pool2.CNhs13232.10253-104C11.01
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.33
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.91
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.85
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.31
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.02
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H32.09
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.01
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.12
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.65
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.18
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.54
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.84
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.01
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C35.26
Mouse Granule cells, donor2.CNhs12357.11731-123E35.82
Mouse Granule cells, donor3.CNhs12108.11636-122C77.61
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.28
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.24
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.31
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.42
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.33
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.16
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.06
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D47.52
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F47.04
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D87.29
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.23
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.21
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D67.95
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F67.97
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E19.13
Mouse Schwann, donor1.CNhs12507.11728-123D92.20
Mouse Schwann, donor2.CNhs12573.11746-123F92.12
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.90
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.19
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.41
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.39
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.52
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.53
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G34.04
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.69
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D72.08
adrenal gland, embryo E14.CNhs11038.406-44C52.43
adrenal gland, embryo E16.CNhs11004.1254-43D62.74
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F51.96
adrenal gland, neonate N00.CNhs11191.1311-23C11.53
adrenal gland, neonate N25.CNhs11223.1377-27I30.88
amnion, adult pregnant day17.5.CNhs10488.583-22A82.22
aorta, adult.CNhs10498.46-23H11.16
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.81
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.60
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.51
corpora quadrigemina, adult.CNhs10501.16-22A42.85
corpus striatum, adult.CNhs10487.19-21D82.75
corpus striatum, neonate N00.CNhs11226.630-43F112.69
cortex, adult.CNhs10473.12-14D52.09
cortex, neonate N30.CNhs11107.1392-42F23.07
diencephalon, adult.CNhs10482.20-12F21.66
diencephalon, neonate N30.CNhs11201.1388-42B23.73
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.02
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.62
epididymis, adult.CNhs10490.58-23B22.02
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C61.43
eyeball, embryo E14.CNhs10521.399-16E21.61
eyeball, embryo E15.CNhs10593.426-16C91.80
eyeball, embryo E17.CNhs11023.1261-18D41.36
eyeball, neonate N00.CNhs11207.633-15C61.70
eyeball, neonate N01.CNhs11140.1532-43E71.15
eyeball, neonate N02.CNhs11205.1551-44G81.12
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E22.37
forelimb, embryo E12.CNhs10600.359-14H21.89
forelimb, embryo E13.CNhs10589.384-1E21.41
forelimb, embryo E14.CNhs10577.413-26A81.32
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B51.44
gonad, embryo E13.CNhs11044.1564-45I61.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.14
heart, embryo E11.CNhs10586.331-24E92.28
heart, embryo E12.CNhs11015.353-12F53.28
heart, embryo E13.CNhs11013.376-3I92.34
heart, embryo E14.CNhs10597.403-26D43.31
heart, embryo E15.CNhs11017.431-16C82.36
heart, embryo E16.CNhs11021.457-17C62.01
heart, embryo E17.CNhs11025.479-18E52.79
heart, embryo E18.CNhs11030.1283-20G32.15
heart, neonate N00.CNhs11213.639-21E31.52
heart, neonate N03.CNhs11221.1349-25I23.46
heart, neonate N10.CNhs11118.749-24G11.64
heart, neonate N16.CNhs11209.782-15G11.22
heart, neonate N20.CNhs11127.821-26I61.17
heart, neonate N25.CNhs11196.1351-25D31.32
heart, neonate N30.CNhs11202.1390-42D21.07
hippocampus, adult.CNhs10478.13-16E81.26
hippocampus, neonate N00.CNhs11228.627-43G14.42
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D51.39
intestine, embryo E15.CNhs10602.976-16D82.84
intestine, embryo E16.CNhs10585.463-22H41.41
intestine, embryo E17.CNhs10582.482-18D31.56
intestine, embryo E18.CNhs10526.1289-20F72.09
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E91.32
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F21.99
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.86
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I91.14
kidney, embryo E15.CNhs10997.434-16F81.83
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.02
kidney, embryo E18.CNhs11001.1288-20C71.36
kidney, neonate N00.CNhs11214.646-21G71.12
kidney, neonate N10.CNhs11206.758-6D51.52
kidney, neonate N20.CNhs11113.832-19I11.33
kidney, neonate N25.CNhs11122.1353-25F31.57
kidney, neonate N30.CNhs11203.1385-42H10.86
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F81.84
liver, embryo E13.CNhs10524.378-3H61.18
liver, embryo E14.CNhs10594.409-16E11.57
liver, embryo E15.CNhs10520.433-16D71.83
liver, embryo E16.CNhs10523.462-17F50.96
liver, embryo E17.CNhs10510.481-18A31.27
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.81
liver, neonate N03.CNhs11123.1345-25G21.65
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H21.12
liver, neonate N10.CNhs11115.751-24B91.56
liver, neonate N20.CNhs11220.823-25A30.76
liver, neonate N25.CNhs11198.1368-26H10.72
liver, neonate N30.CNhs11106.1382-42D12.89
lung, adult.CNhs10474.28-22B10.92
lung, embryo E12.CNhs10522.354-16G21.14
lung, embryo E14.CNhs10604.404-26F81.14
lung, embryo E15.CNhs11020.432-17C50.68
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A61.01
lung, embryo E18.CNhs10583.1287-20I62.14
lung, neonate N00.CNhs11224.640-42C60.78
lung, neonate N06.CNhs11212.683-20E50.79
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E61.28
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.69
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B62.46
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C21.44
medulla oblongata, neonate N30.CNhs11200.1396-42A31.52
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.82
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.51
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.08
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.19
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.78
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.98
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.77
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I71.42
ovary, embryo E18.CNhs11040.505-44H71.25
ovary, neonate N00.CNhs11217.1299-22I41.95
oviduct, adult pregnant day01.CNhs10500.988-6G61.15
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F22.12
pancreas, embryo E16.CNhs11003.460-26E51.70
pancreas, embryo E17.CNhs10599.1558-45G32.07
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D81.43
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E62.52
pituitary gland, embryo E13.CNhs11009.370-44C70.78
pituitary gland, embryo E14.CNhs11037.398-44A51.71
pituitary gland, embryo E15.CNhs10592.427-16B91.60
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F51.65
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I71.88
placenta, adult pregnant day17.CNhs10464.577-18G32.54
prostate, adult.CNhs10470.859-1F81.10
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G41.45
skin, neonate N03.CNhs11215.662-22H32.65
skin, neonate N06.CNhs11097.693-20I51.67
skin, neonate N10.CNhs11108.762-6C41.81
small intestine, neonate N16.CNhs11114.790-21I11.17
spinal cord, adult.CNhs10505.24-13C92.41
spleen, adult.CNhs10465.25-2G20.68
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F21.48
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.51
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.70
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.69
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.74
stomach, embryo E15.CNhs10603.1252-16G81.83
stomach, embryo E16.CNhs11022.459-17D41.51
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C61.75
stomach, neonate N03.CNhs11193.1340-24B80.81
stomach, neonate N07.CNhs11210.718-18A91.32
stomach, neonate N25.CNhs11104.1355-25E41.83
stomach, neonate N30.CNhs11134.1386-42I11.30
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G51.69
testis, embryo E13.CNhs11031.389-23F52.09
testis, embryo E15.CNhs11034.443-27C53.81
testis, embryo E16.CNhs11033.470-26G52.92
testis, embryo E17.CNhs11029.486-18I52.32
testis, embryo E18.CNhs11027.503-18G51.69
testis, neonate N00.CNhs11189.1300-22B72.46
testis, neonate N07.CNhs11222.726-26I43.52
testis, neonate N10.CNhs11204.763-44D94.51
testis, neonate N20.CNhs11110.839-18H33.38
testis, neonate N30.CNhs11130.1391-42E21.44
thymus, adult.CNhs10471.38-12B50.95
thymus, embryo E14.CNhs11041.402-44I41.82
thymus, embryo E15.CNhs11005.430-45I20.72
thymus, embryo E16.CNhs11002.456-26C51.30
thymus, embryo E17.CNhs10581.478-18C11.25
thymus, embryo E18.CNhs10595.1273-19G40.79
thymus, neonate N02.CNhs11181.1541-43F80.72
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.71
thymus, neonate N07.CNhs11211.713-19D30.38
thymus, neonate N10.CNhs11194.748-24E40.81
thymus, neonate N20.CNhs11186.820-7A20.49
thymus, neonate N25.CNhs11125.1362-25G70.58
thymus, neonate N30.CNhs11132.1393-42G20.35
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H34.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F74.04
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.35
urinary bladder, adult.CNhs10481.879-12E40.97
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E50.92
vagina, adult.CNhs10502.89-27D51.07
vesicular gland, adult.CNhs10491.51-27F82.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.26
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.23
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.80
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A65.40
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.60
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.72
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.07
whole body, embryo E11.CNhs11014.324-5I81.14
whole body, embryo E12.CNhs10587.857-27C92.79
whole body, embryo E13.CNhs10512.372-23H21.20
whole body, embryo E14.5.CNhs10578.420-27D21.46
whole body, embryo E14.CNhs10519.395-14B12.72
whole body, embryo E16.CNhs10514.453-14F22.02
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.81
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.03
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G55.07
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.15
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.30
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.99
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.67
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.70
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.21
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.35
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.28
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.49
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.81
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.76
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.32
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I54.50
whole body, embryo E18.CNhs10516.493-3B31.40
whole body, neonate N00.CNhs10525.657-19C22.36
whole body, neonate N01.CNhs10576.659-23C61.15
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.52e-1023
neuroblast (sensu Vertebrata)1.52e-1023
neuron1.51e-0733
neuronal stem cell1.51e-0733
neuroblast1.51e-0733
electrically signaling cell1.51e-0733

Uber anatomy
Ontology termp-valuen
gray matter1.44e-0934
structure with developmental contribution from neural crest4.02e-0892
nervous system5.77e-0875
regional part of nervous system6.66e-0854
neural tube6.76e-0852
neural rod6.76e-0852
future spinal cord6.76e-0852
neural keel6.76e-0852
central nervous system1.54e-0773
embryo2.24e-07320
ectoderm-derived structure3.62e-0795
ectoderm3.62e-0795
presumptive ectoderm3.62e-0795
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