FFCP PHASE1:Mm9::chr2:80421152..80421177,-: Difference between revisions
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{{FFCP|EntrezGene=50884|HGNC=|MCL_coexpression_id=1610|UniProt=A2AS97,P28660,A2AS98|association_with_transcript=-30bp_to_NM_016965,uc008khm.1,uc008khn.1,uc012byb.1_5end|description=CAGE_peak_4_at_Nckap1_5end|id=chr2:80421152..80421177,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002021!4.89e-08!10;UBERON:0000411!4.89e-08!10;UBERON:0001950!4.89e-08!10|ontology_enrichment_uberon_v019_2=UBERON:0002021,4.48e-08,10;UBERON:0000411,4.48e-08,10;UBERON:0001950,4.48e-08,10;UBERON:0004121,6.05e-07,95;UBERON:0000924,6.05e-07,95;UBERON:0006601,6.05e-07,95|phase1_expression=2.08193501236232,3.14077866875425,3.63999391511629,3.62957053568196,5.00895729946347,4.53274034162102,2.10251376535973,0,4.646027831005,7.0219357896598,0.171217968225505,0.239316476986009,0,0,0.333109761815663,0.404950534779652,0,0.157731082679119,0.137114433605739,0,4.84746753861098,0.0992909512008853,0,2.55987876469451,2.98232065387321,5.16808767703518,3.01533397311352,3.44753972297422,3.42042155021473,4.78857246543868,4.8780712344167,1.90509202037889,2.46025915033828,0,0.866554859253824,1.32987716286794,2.04169356262369,0,0,0,0,0,0,5.91715044485213,5.37297735463427,4.03802854755699,3.12956537739216,1.30815093828268,0.659058548203415,1.55543919259427,2.37976916763116,0,0,0.725362142011344,0.336093799142464,8.48956138918625,4.58453503902011,5.67239301505187,1.21389876515759,1.5869729378161,0,4.06613438482959,0,0.449949858640699,0,0,2.09720077362883,0,1.14058573539325,1.21505344498522,0.420649922702764,4.28476476605705,5.30084498283872,1.34739879136449,0.575072826109418,2.75765635983006,4.40463523997555,7.2781782708557,7.52672012955593,1.05509030184155,1.18933936683133,2.08365348222704,3.35019598801657,2.8138130501584,5.95913166329559,7.66034322231536,8.54230084794618,3.54158947068071,4.61929779332423,3.70300644523249,2.6087803983151,0.860423876981386,3.39985666853875,2.69851595818909,3.24888208723835,3.13618820968135,2.24711072210803,2.89731548382698,2.07828803682295,1.7666978725517,1.26759077799012,3.84979432242953,0,0,3.030874574157,3.54703811665138,4.04419556011827,4.11061966988616,2.33044095282455,1.92974780784272,2.08182392119363,3.04465478312141,2.53677046981664,2.11011696773672,2.4693628498498,4.39833069653864,4.6967043869531,3.47038456607788,0.884610551949874,4.85300549842228,3.3126227769059,1.45462575940567,5.59175283654366,2.04946557908083,6.28340120440365,4.59822699375465,0.11981512450592,0,0.127070227073065,4.04434726393021,13.2675174817402,5.52879149296603,13.0368240144207,12.0186264945255,3.94797284663164,10.8701646255398,4.68461073711455,3.6078021476927,5.05445516867349,2.10441855886474,1.95180664444056,2.06911893990126,3.42118046630164,4.06903008156431,2.78949646520444,3.97152532883034,4.49768277886698,2.84573707812917,0.862271971731369,1.32374256117473,2.81521798662318,3.06874025398605,3.05851974148158,9.4028084960985,6.99659263787008,2.58744546864041,0,0,0.284163499395593,2.27838349789052,2.57978665979206,1.98068267607116,2.84093682702252,1.37734962223183,2.31400669331067,2.32533944750408,3.48755421819505,3.50296027101508,2.79751744852917,4.10418660197738,2.26992666728396,3.36259971078264,1.97595103761946,2.01309628140558,21.8701546506692,5.24813523134351,9.91256348951394,3.96675849995316,2.77274725695804,2.32236671860439,2.44848176511977,2.01683524623343,2.2237804384487,2.47293313946327,2.37264530772256,2.9645811850322,3.77002813200404,3.97912944082302,3.50935356814416,2.69645822596266,6.05186539649144,4.18196673834171,0.948339504765408,3.42745537829186,6.76246414038483,3.46207257337034,2.71533482034676,4.69909993265134,2.84564417059158,2.95220295959204,2.19798218977925,3.08492909804501,1.48226313543574,2.00214126859313,2.55526693647164,1.34917267430912,0.811440485554012,1.20588579876208,2.03700681425136,2.30156909960649,1.62135226775035,1.64736847912849,1.43768206527355,1.48856379067401,1.87222603868736,2.02063102357689,2.33216637578486,1.92977408545347,3.69506380333209,2.84237117655727,4.07412441105065,2.8856664581782,2.11221223459652,2.01007508930179,2.85652369063216,11.3177515757523,5.04432461139811,3.5434350343804,5.58091690301205,3.76885623846197,4.31712454664739,4.19482269886384,0,0,1.47529281905711,2.20749397043786,3.05046120976805,5.74337264301796,1.96721934452011,1.26235463602186,4.10160685241134,3.51394869866975,3.44677436372478,5.25731355495614,6.23836287430704,4.24614796183249,6.47697122679831,2.33804686329049,4.74345333535828,9.3183181762324,2.98074178937364,2.49291845134157,4.88660878060728,1.64970122972535,1.32745138339963,1.94224508923985,2.41858845571801,1.32023555829129,1.77181135728464,2.15204603560749,2.32585463851399,4.72593848320757,5.34746067577082,0.948110273807448,1.05418608574999,2.06271086496374,1.70219802876894,1.8006109403131,1.55230420539305,2.7863814554107,3.01478397191865,4.28085162244969,3.78462747384878,1.522324745573,6.10146440965647,6.99045833850607,2.64634077665954,6.10079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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:50884 | |||
|HGNC= | |||
|MCL_coexpression_id=1610 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:A2AS97,uniprot:P28660,uniprot:A2AS98 | |||
|association_with_transcript=-30bp_to_NM_016965,uc008khm.1,uc008khn.1,uc012byb.1_5end | |||
|cluster_id=chr2:80421152..80421177,- | |||
|description=CAGE_peak_4_at_Nckap1_5end | |||
|id=chr2:80421152..80421177,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002021!4.89e-08!10;UBERON:0000411!4.89e-08!10;UBERON:0001950!4.89e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,4.48e-08,10;UBERON:0000411,4.48e-08,10;UBERON:0001950,4.48e-08,10;UBERON:0004121,6.05e-07,95;UBERON:0000924,6.05e-07,95;UBERON:0006601,6.05e-07,95 | |||
|phase1_expression=2.08193501236232,3.14077866875425,3.63999391511629,3.62957053568196,5.00895729946347,4.53274034162102,2.10251376535973,0,4.646027831005,7.0219357896598,0.171217968225505,0.239316476986009,0,0,0.333109761815663,0.404950534779652,0,0.157731082679119,0.137114433605739,0,4.84746753861098,0.0992909512008853,0,2.55987876469451,2.98232065387321,5.16808767703518,3.01533397311352,3.44753972297422,3.42042155021473,4.78857246543868,4.8780712344167,1.90509202037889,2.46025915033828,0,0.866554859253824,1.32987716286794,2.04169356262369,0,0,0,0,0,0,5.91715044485213,5.37297735463427,4.03802854755699,3.12956537739216,1.30815093828268,0.659058548203415,1.55543919259427,2.37976916763116,0,0,0.725362142011344,0.336093799142464,8.48956138918625,4.58453503902011,5.67239301505187,1.21389876515759,1.5869729378161,0,4.06613438482959,0,0.449949858640699,0,0,2.09720077362883,0,1.14058573539325,1.21505344498522,0.420649922702764,4.28476476605705,5.30084498283872,1.34739879136449,0.575072826109418,2.75765635983006,4.40463523997555,7.2781782708557,7.52672012955593,1.05509030184155,1.18933936683133,2.08365348222704,3.35019598801657,2.8138130501584,5.95913166329559,7.66034322231536,8.54230084794618,3.54158947068071,4.61929779332423,3.70300644523249,2.6087803983151,0.860423876981386,3.39985666853875,2.69851595818909,3.24888208723835,3.13618820968135,2.24711072210803,2.89731548382698,2.07828803682295,1.7666978725517,1.26759077799012,3.84979432242953,0,0,3.030874574157,3.54703811665138,4.04419556011827,4.11061966988616,2.33044095282455,1.92974780784272,2.08182392119363,3.04465478312141,2.53677046981664,2.11011696773672,2.4693628498498,4.39833069653864,4.6967043869531,3.47038456607788,0.884610551949874,4.85300549842228,3.3126227769059,1.45462575940567,5.59175283654366,2.04946557908083,6.28340120440365,4.59822699375465,0.11981512450592,0,0.127070227073065,4.04434726393021,13.2675174817402,5.52879149296603,13.0368240144207,12.0186264945255,3.94797284663164,10.8701646255398,4.68461073711455,3.6078021476927,5.05445516867349,2.10441855886474,1.95180664444056,2.06911893990126,3.42118046630164,4.06903008156431,2.78949646520444,3.97152532883034,4.49768277886698,2.84573707812917,0.862271971731369,1.32374256117473,2.81521798662318,3.06874025398605,3.05851974148158,9.4028084960985,6.99659263787008,2.58744546864041,0,0,0.284163499395593,2.27838349789052,2.57978665979206,1.98068267607116,2.84093682702252,1.37734962223183,2.31400669331067,2.32533944750408,3.48755421819505,3.50296027101508,2.79751744852917,4.10418660197738,2.26992666728396,3.36259971078264,1.97595103761946,2.01309628140558,21.8701546506692,5.24813523134351,9.91256348951394,3.96675849995316,2.77274725695804,2.32236671860439,2.44848176511977,2.01683524623343,2.2237804384487,2.47293313946327,2.37264530772256,2.9645811850322,3.77002813200404,3.97912944082302,3.50935356814416,2.69645822596266,6.05186539649144,4.18196673834171,0.948339504765408,3.42745537829186,6.76246414038483,3.46207257337034,2.71533482034676,4.69909993265134,2.84564417059158,2.95220295959204,2.19798218977925,3.08492909804501,1.48226313543574,2.00214126859313,2.55526693647164,1.34917267430912,0.811440485554012,1.20588579876208,2.03700681425136,2.30156909960649,1.62135226775035,1.64736847912849,1.43768206527355,1.48856379067401,1.87222603868736,2.02063102357689,2.33216637578486,1.92977408545347,3.69506380333209,2.84237117655727,4.07412441105065,2.8856664581782,2.11221223459652,2.01007508930179,2.85652369063216,11.3177515757523,5.04432461139811,3.5434350343804,5.58091690301205,3.76885623846197,4.31712454664739,4.19482269886384,0,0,1.47529281905711,2.20749397043786,3.05046120976805,5.74337264301796,1.96721934452011,1.26235463602186,4.10160685241134,3.51394869866975,3.44677436372478,5.25731355495614,6.23836287430704,4.24614796183249,6.47697122679831,2.33804686329049,4.74345333535828,9.3183181762324,2.98074178937364,2.49291845134157,4.88660878060728,1.64970122972535,1.32745138339963,1.94224508923985,2.41858845571801,1.32023555829129,1.77181135728464,2.15204603560749,2.32585463851399,4.72593848320757,5.34746067577082,0.948110273807448,1.05418608574999,2.06271086496374,1.70219802876894,1.8006109403131,1.55230420539305,2.7863814554107,3.01478397191865,4.28085162244969,3.78462747384878,1.522324745573,6.10146440965647,6.99045833850607,2.64634077665954,6.10079135883476,12.2712964288888,7.53911561601948,5.72987251215055,3.44695889464629,3.49777003955821,5.37733375830478,1.36696704638282,1.857481811669,1.48155621895769,1.31857919903284,0.683471138605126,0.457556346413045,0.679913719975421,0.979660166265606,0.552799895217695,16.2294005062569,1.89801596148681,3.65975040828328,2.91614420218863,7.10900206449194,6.98760203987768,7.55240339754996,8.43065248398426,9.6849698534091,5.57344385154709,0.621339313086926,2.25477175473676,3.13984746692355,2.31641886639937,3.50012139019286,3.09983576346555,2.36538575687089,3.87278887530988,2.99470085141085,2.51662426621706,2.41584120826006,2.59227005632079,0,1.41907650703115,0.513554785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| |||
|short_description=p4@Nckap1 | |||
}} |
Revision as of 13:34, 5 August 2015
Short description: | p4@Nckap1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Nckap1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1610 |
Association with transcript: | -30bp_to_NM_016965, uc008khm.1, uc008khn.1, uc012byb.1_5end |
EntrezGene: | 50884 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 4.48e-08 | 10 |
visual cortex | 4.48e-08 | 10 |
neocortex | 4.48e-08 | 10 |
ectoderm-derived structure | 6.05e-07 | 95 |
ectoderm | 6.05e-07 | 95 |
presumptive ectoderm | 6.05e-07 | 95 |