FFCP PHASE1:Mm9::chr18:15991281..15991283,+: Difference between revisions
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{{FFCP|EntrezGene=100040551|HGNC=|MCL_coexpression_id=1551|UniProt=E9PYL9|association_with_transcript=-12bp_to_ENSMUST00000079733_5end|description=CAGE_peak_1_at_Gm10036_5end|id=chr18:15991281..15991283,+|ontology_enrichment_celltype=CL:0000063!2.40e-21!66;CL:0000988!1.89e-13!32;CL:0002032!1.89e-13!32;CL:0000037!1.89e-13!32;CL:0000566!1.89e-13!32;CL:0000837!1.89e-13!32;CL:0000144!5.89e-13!121;CL:0000012!5.89e-13!121;CL:0002320!4.88e-12!46;CL:0000134!4.88e-12!46;CL:0002371!1.89e-11!118;CL:0000548!1.12e-10!115;CL:0000004!1.12e-10!115;CL:0000255!1.12e-10!115;CL:0000219!1.73e-10!54;CL:0002031!3.04e-10!25;CL:0000838!2.68e-08!12;CL:0000066!3.59e-08!25;CL:0000034!4.88e-08!97;CL:0000542!7.61e-08!13;CL:0000051!7.61e-08!13;CL:0000084!9.68e-08!11;CL:0000827!9.68e-08!11;CL:0002076!2.10e-07!15;CL:0000049!5.31e-07!19;CL:0000791!5.94e-07!9;CL:0000789!5.94e-07!9;CL:0002420!5.94e-07!9;CL:0002419!5.94e-07!9;CL:0000790!5.94e-07!9|ontology_enrichment_celltype_v019_2=CL:0000988,1.89e-13,32;CL:0002032,1.89e-13,32;CL:0000037,1.89e-13,32;CL:0000837,1.89e-13,32;CL:0002320,4.88e-12,46;CL:0000134,4.88e-12,46;CL:0000219,1.73e-10,54;CL:0002031,3.04e-10,25;CL:0000838,2.68e-08,12;CL:0000066,3.59e-08,25;CL:0000034,4.86e-08,97;CL:0000542,7.61e-08,13;CL:0000051,7.61e-08,13;CL:0000084,9.68e-08,11;CL:0000827,9.68e-08,11;CL:0002076,2.10e-07,15;CL:0000049,5.31e-07,19;CL:0000791,5.94e-07,9;CL:0000789,5.94e-07,9;CL:0002420,5.94e-07,9;CL:0002419,5.94e-07,9;CL:0000790,5.94e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!4.88e-12!46;UBERON:0000490!1.14e-08!66;UBERON:0003929!2.14e-08!55;UBERON:0002193!1.95e-07!48;UBERON:0002390!3.04e-07!45;UBERON:0003061!3.04e-07!45;UBERON:0002405!3.61e-07!70;UBERON:0005911!3.75e-07!69;UBERON:0000072!4.27e-07!27|ontology_enrichment_uberon_v019_2=UBERON:0002384,4.88e-12,46;UBERON:0000490,1.14e-08,66;UBERON:0003929,2.14e-08,55;UBERON:0002193,1.95e-07,48;UBERON:0002405,1.95e-07,48;UBERON:0002390,3.04e-07,45;UBERON:0003061,3.04e-07,45;UBERON:0005911,3.75e-07,69;UBERON:0000072,4.27e-07,27|phase1_expression=273.534230854988,94.9213108779062,119.664799959448,24.8020653271601,68.1218192727032,217.403657125897,197.169068662624,459.679031452011,733.931608576639,561.520798646462,456.980757193873,306.883495655059,632.929098555668,443.658542276412,134.909453535343,256.941114317689,218.263305975982,499.534338844769,435.201212264615,626.823515705691,7.48380953329414,50.7376760636524,435.420048494605,181.75139229331,242.485610087999,198.684259583797,242.519003837559,206.421440913082,196.864262556803,251.274039370651,265.85488227571,40.0069324279568,76.2680336604867,31.6963362030877,542.174490273142,534.77685411827,555.953157102431,23.8563029520037,142.984368047855,57.5876118371178,24.1174910092716,27.3218193983378,41.7538903606792,10.7012295279241,8.21153142878068,14.5001934207728,11.7358701652206,18.532138292338,13.1811709640683,14.7766723296455,42.4158857524848,7.18762821824858,416.939776053475,489.619445857657,491.369134346282,21.6097926270195,23.2092086350393,23.7209162447623,16.589949790487,6.87688273053643,13.9442908771359,50.4878352783007,28.4574334755565,22.9474427906757,2.96659908770092,17.0515227587064,5.69240209984969,5.76327457982332,113.7475047024,12.9605700798423,23.5563956713548,17.1390590642282,9.93908434282261,23.5182334492712,29.0411777185256,39.5264078242309,0,9.95961237064464,9.67721159514334,16.4857859662742,19.3038928001084,25.0038417867245,10.3297709630511,11.2552522006336,10.6958773443767,1.47314292736834,9.39653093274079,14.7255562201987,167.20343487967,140.10967243798,157.396417365011,271.033521249137,23.7989966797713,10.7940638327563,16.2444104361917,16.1289679355041,11.2355536105401,16.5317412900716,262.124078644295,264.651341308245,290.419131579515,116.777094447029,68.7974147207943,28.4426681261332,293.561851611206,273.628654713106,253.267746952406,9.59144589640104,9.83963957859253,11.875371125186,21.685665845767,30.4465478312141,19.602317266765,23.5127319262091,15.4041206347773,67.6086261353654,13.8429181931249,9.54355755671417,29.1921482143459,10.0295446967394,6.62524555381181,19.3950101254089,0,5.5628351432194,3.35114730901528,13.7946809812639,669.646730863588,1398.37326594563,769.53729515448,8.23848516726525,9.15001205637253,59.4345085493849,7.47444576826789,5.37002460393694,6.85700547046548,5.19172041816825,19.5531578592607,20.4027431800553,26.5358896355358,18.7293251738962,21.079511759958,29.4274693674845,19.9868964083938,17.9338733224501,8.84474488967262,11.5302348256365,10.1197862524507,17.074422468775,18.5388473922244,15.3175924935934,15.8356011747554,23.0155519048954,21.6876854395966,13.9300866608867,20.5782136407943,22.2918378836712,328.635771662594,872.409405118884,39.782889915383,16.3629360303046,19.9347150983932,17.2859579002574,12.3107262504309,11.6090896730968,16.3523139660621,16.7424440220294,13.9502168727802,76.2477685657617,12.341988743511,11.1633875573785,7.78260571640215,14.4737987551079,11.8557062257167,12.078577688433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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:100040551 | |||
|HGNC= | |||
|MCL_coexpression_id=1551 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:E9PYL9 | |||
|association_with_transcript=-12bp_to_ENSMUST00000079733_5end | |||
|cluster_id=chr18:15991281..15991283,+ | |||
|description=CAGE_peak_1_at_Gm10036_5end | |||
|id=chr18:15991281..15991283,+ | |||
|ontology_enrichment_celltype=CL:0000063!2.40e-21!66;CL:0000988!1.89e-13!32;CL:0002032!1.89e-13!32;CL:0000037!1.89e-13!32;CL:0000566!1.89e-13!32;CL:0000837!1.89e-13!32;CL:0000144!5.89e-13!121;CL:0000012!5.89e-13!121;CL:0002320!4.88e-12!46;CL:0000134!4.88e-12!46;CL:0002371!1.89e-11!118;CL:0000548!1.12e-10!115;CL:0000004!1.12e-10!115;CL:0000255!1.12e-10!115;CL:0000219!1.73e-10!54;CL:0002031!3.04e-10!25;CL:0000838!2.68e-08!12;CL:0000066!3.59e-08!25;CL:0000034!4.88e-08!97;CL:0000542!7.61e-08!13;CL:0000051!7.61e-08!13;CL:0000084!9.68e-08!11;CL:0000827!9.68e-08!11;CL:0002076!2.10e-07!15;CL:0000049!5.31e-07!19;CL:0000791!5.94e-07!9;CL:0000789!5.94e-07!9;CL:0002420!5.94e-07!9;CL:0002419!5.94e-07!9;CL:0000790!5.94e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.89e-13,32;CL:0002032,1.89e-13,32;CL:0000037,1.89e-13,32;CL:0000837,1.89e-13,32;CL:0002320,4.88e-12,46;CL:0000134,4.88e-12,46;CL:0000219,1.73e-10,54;CL:0002031,3.04e-10,25;CL:0000838,2.68e-08,12;CL:0000066,3.59e-08,25;CL:0000034,4.86e-08,97;CL:0000542,7.61e-08,13;CL:0000051,7.61e-08,13;CL:0000084,9.68e-08,11;CL:0000827,9.68e-08,11;CL:0002076,2.10e-07,15;CL:0000049,5.31e-07,19;CL:0000791,5.94e-07,9;CL:0000789,5.94e-07,9;CL:0002420,5.94e-07,9;CL:0002419,5.94e-07,9;CL:0000790,5.94e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!4.88e-12!46;UBERON:0000490!1.14e-08!66;UBERON:0003929!2.14e-08!55;UBERON:0002193!1.95e-07!48;UBERON:0002390!3.04e-07!45;UBERON:0003061!3.04e-07!45;UBERON:0002405!3.61e-07!70;UBERON:0005911!3.75e-07!69;UBERON:0000072!4.27e-07!27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,4.88e-12,46;UBERON:0000490,1.14e-08,66;UBERON:0003929,2.14e-08,55;UBERON:0002193,1.95e-07,48;UBERON:0002405,1.95e-07,48;UBERON:0002390,3.04e-07,45;UBERON:0003061,3.04e-07,45;UBERON:0005911,3.75e-07,69;UBERON:0000072,4.27e-07,27 | |||
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| |||
|short_description=p1@Gm10036 | |||
}} |
Revision as of 13:30, 5 August 2015
Short description: | p1@Gm10036 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gm10036_5end |
Coexpression cluster: | MCL_coexpression_mm9:1551 |
Association with transcript: | -12bp_to_ENSMUST00000079733_5end |
EntrezGene: | 100040551 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.89e-13 | 32 |
hematopoietic oligopotent progenitor cell | 1.89e-13 | 32 |
hematopoietic stem cell | 1.89e-13 | 32 |
hematopoietic multipotent progenitor cell | 1.89e-13 | 32 |
connective tissue cell | 4.88e-12 | 46 |
mesenchymal cell | 4.88e-12 | 46 |
motile cell | 1.73e-10 | 54 |
hematopoietic lineage restricted progenitor cell | 3.04e-10 | 25 |
lymphoid lineage restricted progenitor cell | 2.68e-08 | 12 |
epithelial cell | 3.59e-08 | 25 |
stem cell | 4.86e-08 | 97 |
lymphocyte | 7.61e-08 | 13 |
common lymphoid progenitor | 7.61e-08 | 13 |
T cell | 9.68e-08 | 11 |
pro-T cell | 9.68e-08 | 11 |
endo-epithelial cell | 2.10e-07 | 15 |
common myeloid progenitor | 5.31e-07 | 19 |
mature alpha-beta T cell | 5.94e-07 | 9 |
alpha-beta T cell | 5.94e-07 | 9 |
immature T cell | 5.94e-07 | 9 |
mature T cell | 5.94e-07 | 9 |
immature alpha-beta T cell | 5.94e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 4.88e-12 | 46 |
unilaminar epithelium | 1.14e-08 | 66 |
gut epithelium | 2.14e-08 | 55 |
hemolymphoid system | 1.95e-07 | 48 |
immune system | 1.95e-07 | 48 |
hematopoietic system | 3.04e-07 | 45 |
blood island | 3.04e-07 | 45 |
endo-epithelium | 3.75e-07 | 69 |
segment of respiratory tract | 4.27e-07 | 27 |